Literature DB >> 32572421

Planar graphene/h-BN/graphene heterostructures for protein stretching and confinement.

Zhi He1, Ruhong Zhou.   

Abstract

Protein stretching and confinement in nanochannels is critical for advancing single-molecule detection techniques. For standard nanochannels integrated with nano-sensors, reducing their cross-section is beneficial for reading highly localized signals with minimal error, but results in increasing difficulty for the initial capture of any chain molecules due to the entropy barrier. Using molecular dynamics simulations, we show that spontaneous protein stretching can be realized by a two-dimensional (2D) heterostructure composed of a hexagonal boron nitride (h-BN) nanoribbon stitched with two graphene (GRA) sheets (i.e., a sandwiched GRA/BN/GRA structure). Due to fast protein diffusion on its flat surface and adsorption potential difference between two 2D materials, this planar nanochannel permits effective capture and elongation of three representative intrinsically disordered proteins including amyloid-β (1-42), polyglutamine (42) and α-synuclein (61-95). Moreover, we found that the extremely narrow h-BN stripe can provide stronger confinement for a longer polyglutamine chain after being stretched. Our approach has the potential to facilitate the bona fide readout of single-molecule protein sequencing techniques.

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Year:  2020        PMID: 32572421     DOI: 10.1039/d0nr02271c

Source DB:  PubMed          Journal:  Nanoscale        ISSN: 2040-3364            Impact factor:   7.790


  3 in total

Review 1.  Understanding interactions between biomolecules and two-dimensional nanomaterials using in silico microscopes.

Authors:  Serena H Chen; David R Bell; Binquan Luan
Journal:  Adv Drug Deliv Rev       Date:  2022-05-19       Impact factor: 17.873

2.  Revealing Topological Barriers against Knot Untying in Thermal and Mechanical Protein Unfolding by Molecular Dynamics Simulations.

Authors:  Yan Xu; Runshan Kang; Luyao Ren; Lin Yang; Tongtao Yue
Journal:  Biomolecules       Date:  2021-11-13

3.  Planar Boronic Graphene and Nitrogenized Graphene Heterostructure for Protein Stretch and Confinement.

Authors:  Xuchang Su; Zhi He; Lijun Meng; Hong Liang; Ruhong Zhou
Journal:  Biomolecules       Date:  2021-11-24
  3 in total

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