Literature DB >> 32571725

Molecular Characterization of Upper Tract Urothelial Carcinoma in the Era of Next-generation Sequencing: A Systematic Review of the Current Literature.

Melanie R Hassler1, Freddie Bray2, James W F Catto3, Arthur P Grollman4, Arndt Hartmann5, Vitaly Margulis6, Surena F Matin7, Morgan Roupret8, John P Sfakianos9, Shahrokh F Shariat10, Bishoy M Faltas11.   

Abstract

CONTEXT: While upper tract urothelial carcinoma (UTUC) share histological appearance with bladder cancer (BC), the former has differences in etiology and clinical phenotype consistent with characteristic molecular alterations.
OBJECTIVE: To systematically evaluate current genomic sequencing and proteomic data examining molecular alterations in UTUC. EVIDENCE ACQUISITION: A systematic review using PubMed, Scopus, and Web of Science was performed in December 2019 according to the Preferred Reporting Items for Systematic Reviews and Meta-analyses statement. EVIDENCE SYNTHESIS: A total of 46 publications were selected for inclusion in this report, including 13 studies assessing genome-wide alterations, 18 studies assessing gene expression or microRNA expression profiles, three studies assessing proteomics, one study assessing genome-wide DNA methylation, and 14 studies evaluating distinct pathway alteration patterns. Differences between sporadic and hereditary UTUC, and between UTUC and BC, as well as molecular profiles associated with exposure to aristolochic acid are highlighted. Molecular pathways relevant to UTUC biology, such as alterations in FGFR3, TP53, or microsatellite instability, are discussed. Our findings are limited by tumor and patient heterogeneity and different platforms used in the studies.
CONCLUSIONS: Molecular events in UTUC and BC can be shared or distinct. Consequently, molecular subtypes differ according to location. Further work is needed to define the epigenomic and proteomic features of UTUC, and understand the mechanisms by which they shape the clinical behavior of UTUC. PATIENT
SUMMARY: We report the current data on the molecular alterations specific to upper tract urothelial carcinoma (UTUC), resulting from novel genomic and proteomic technologies. Although UTUC biology is comparable with that of bladder cancer, the rates and UTUC-enriched alterations support its uniqueness and the need for precision medicine strategies for this rare tumor type.
Copyright © 2020. Published by Elsevier B.V.

Entities:  

Keywords:  Genomics; Molecular alterations; Molecular characterization; Next-generation sequencing; Proteomics; RNAseq; Renal pelvis; Transcriptomics; Ureter; Urothelial carcinoma

Mesh:

Year:  2020        PMID: 32571725     DOI: 10.1016/j.eururo.2020.05.039

Source DB:  PubMed          Journal:  Eur Urol        ISSN: 0302-2838            Impact factor:   20.096


  17 in total

1.  Truncating CDKN1A mutations: an insight into the biology of urinary tract carcinomas?

Authors:  Omar Alhalabi; Pavlos Msaouel
Journal:  Am J Cancer Res       Date:  2021-12-15       Impact factor: 6.166

Review 2.  Diagnostic challenges and treatment strategies in the management of upper-tract urothelial carcinoma.

Authors:  Victor M Schuettfort; Benjamin Pradere; Fahad Quhal; Hadi Mostafaei; Ekaterina Laukhtina; Keiichiro Mori; Reza Sari Motlagh; Michael Rink; David D'Andrea; Mohammad Abufaraj; Pierre I Karakiewicz; Shahrokh F Shariat
Journal:  Turk J Urol       Date:  2020-10-09

Review 3.  Toward urinary cell-free DNA-based treatment of urothelial carcinoma: a narrative review.

Authors:  Yujiro Hayashi; Kazutoshi Fujita
Journal:  Transl Androl Urol       Date:  2021-04

Review 4.  Lynch Syndrome: Its Impact on Urothelial Carcinoma.

Authors:  Andrea Katharina Lindner; Gert Schachtner; Gennadi Tulchiner; Martin Thurnher; Gerold Untergasser; Peter Obrist; Iris Pipp; Fabian Steinkohl; Wolfgang Horninger; Zoran Culig; Renate Pichler
Journal:  Int J Mol Sci       Date:  2021-01-07       Impact factor: 5.923

Review 5.  Current Knowledge on Genomic Profiling of Upper Tract Urothelial Carcinoma.

Authors:  Elisa De Lorenzis; Giancarlo Albo; Fabrizio Longo; Carolina Bebi; Luca Boeri; Emanuele Montanari
Journal:  Genes (Basel)       Date:  2021-02-25       Impact factor: 4.096

6.  FOXO3A Expression in Upper Tract Urothelial Carcinoma.

Authors:  Guoyao Zhang; Wanping Shi; Enzhao Jia; Lei Zhang; Yongsheng Han; Ronald Rodriguez; Tianjiang Ma
Journal:  Front Oncol       Date:  2021-04-20       Impact factor: 6.244

7.  Identification of potential genes in upper tract urothelial carcinoma using next-generation sequencing with bioinformatics and in vitro analyses.

Authors:  Hsiang-Ying Lee; Ching-Chia Li; Wei-Ming Li; Ya-Ling Hsu; Hsin-Chih Yeh; Hung-Lung Ke; Bi Wen Yeh; Chun-Nung Huang; Chien-Feng Li; Po-Lin Kuo; Wen-Jeng Wu
Journal:  PeerJ       Date:  2021-04-27       Impact factor: 2.984

8.  Aristolochic acid-associated urinary tract cancers: an updated meta-analysis of risk and oncologic outcomes after surgery and systematic review of molecular alterations observed in human studies.

Authors:  Yu-Chan Kang; Ming-Hong Chen; Chung-Ying Lin; Chih-Yun Lin; Yen-Ta Chen
Journal:  Ther Adv Drug Saf       Date:  2021-03-21

9.  Molecular profiles and urinary biomarkers of upper tract urothelial carcinomas associated with aristolochic acid exposure.

Authors:  Sandra Karanović; Maude Ardin; Zuojian Tang; Karla Tomić; Stephanie Villar; Claire Renard; Elisa Venturini; Adam H Lorch; Daniel S Lee; Želimir Stipančić; Neda Slade; Ivana Vuković Brinar; Damir Dittrich; Krešimir Karlović; Fran Borovečki; Kathleen G Dickman; Magali Olivier; Arthur P Grollman; Bojan Jelaković; Jiri Zavadil
Journal:  Int J Cancer       Date:  2021-10-15       Impact factor: 7.316

10.  Immune Checkpoints Inhibitors and Chemotherapy as First-Line Treatment for Metastatic Urothelial Carcinoma: A Network Meta-Analysis of Randomized Phase III Clinical Trials.

Authors:  Hsiao-Ling Chen; Vinson Wai-Shun Chan; Yu-Kang Tu; Erica On-Ting Chan; Hsiu-Mei Chang; Yung-Shun Juan; Jeremy Yuen-Chun Teoh; Hsiang Ying Lee
Journal:  Cancers (Basel)       Date:  2021-03-23       Impact factor: 6.639

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