Literature DB >> 32568531

Development of a Computer-Guided Workflow for Catalyst Optimization. Descriptor Validation, Subset Selection, and Training Set Analysis.

Jeremy J Henle1, Andrew F Zahrt1, Brennan T Rose1, William T Darrow1, Yang Wang1, Scott E Denmark1.   

Abstract

Modern, enantioselective catalyst development is driven largely by empiricism. Although this approach has fostered the introduction of most of the existing synthetic methods, it is inherently limited by the skill, creativity, and chemical intuition of the practitioner. Herein, we present a complementary approach to catalyst optimization in which statistical methods are used at each stage to streamline development. To construct the optimization informatics workflow, a number of critical components had to be subjected to rigorous validation. First, the critically important molecular descriptors were validated in two case studies to establish the importance of conformation-dependent molecular representations. Next, with a large data set available, it was possible to investigate the amount of data necessary to make predictive models with different modeling methods. Given the commercial availability of many catalyst structures, it was possible to compare models generated with algorithmically selected training sets and commercially available training sets. Finally, the augmentation of limited data sets is demonstrated in a method informed by unsupervised learning to restore the accuracy of the generated models.

Year:  2020        PMID: 32568531     DOI: 10.1021/jacs.0c04715

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  3 in total

1.  Compound Uptake into E. coli Can Be Facilitated by N-Alkyl Guanidiniums and Pyridiniums.

Authors:  Sarah J Perlmutter; Emily J Geddes; Bryon S Drown; Stephen E Motika; Myung Ryul Lee; Paul J Hergenrother
Journal:  ACS Infect Dis       Date:  2020-11-23       Impact factor: 5.084

2.  ChemSpaX: exploration of chemical space by automated functionalization of molecular scaffold.

Authors:  Adarsh V Kalikadien; Evgeny A Pidko; Vivek Sinha
Journal:  Digit Discov       Date:  2022-01-06

3.  Predicting relative efficiency of amide bond formation using multivariate linear regression.

Authors:  Brittany C Haas; Adam E Goetz; Ana Bahamonde; J Christopher McWilliams; Matthew S Sigman
Journal:  Proc Natl Acad Sci U S A       Date:  2022-04-11       Impact factor: 12.779

  3 in total

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