Literature DB >> 32567854

Simulating Solvation and Acidity in Complex Mixtures with First-Principles Accuracy: The Case of CH3SO3H and H2O2 in Phenol.

Kevin Rossi1, Veronika Jurásková2, Raphael Wischert3, Laurent Garel4, Clémence Corminbœuf2,5, Michele Ceriotti1,5.   

Abstract

We present a generally applicable computational framework for the efficient and accurate characterization of molecular structural patterns and acid properties in an explicit solvent using H2O2 and CH3SO3H in phenol as an example. To address the challenges posed by the complexity of the problem, we resort to a set of data-driven methods and enhanced sampling algorithms. The synergistic application of these techniques makes the first-principle estimation of the chemical properties feasible without renouncing to the use of explicit solvation, involving extensive statistical sampling. Ensembles of neural network (NN) potentials are trained on a set of configurations carefully selected out of preliminary simulations performed at a low-cost density functional tight-binding (DFTB) level. The energy and forces of these configurations are then recomputed at the hybrid density functional theory (DFT) level and used to train the neural networks. The stability of the NN model is enhanced by using DFTB energetics as a baseline, but the efficiency of the direct NN (i.e., baseline-free) is exploited via a multiple-time-step integrator. The neural network potentials are combined with enhanced sampling techniques, such as replica exchange and metadynamics, and used to characterize the relevant protonated species and dominant noncovalent interactions in the mixture, also considering nuclear quantum effects.

Entities:  

Year:  2020        PMID: 32567854     DOI: 10.1021/acs.jctc.0c00362

Source DB:  PubMed          Journal:  J Chem Theory Comput        ISSN: 1549-9618            Impact factor:   6.006


  4 in total

1.  How to Predict the pK a of Any Compound in Any Solvent.

Authors:  Michael Busch; Ernst Ahlberg; Elisabet Ahlberg; Kari Laasonen
Journal:  ACS Omega       Date:  2022-05-09

Review 2.  Ab Initio Machine Learning in Chemical Compound Space.

Authors:  Bing Huang; O Anatole von Lilienfeld
Journal:  Chem Rev       Date:  2021-08-13       Impact factor: 60.622

3.  Local Kernel Regression and Neural Network Approaches to the Conformational Landscapes of Oligopeptides.

Authors:  Raimon Fabregat; Alberto Fabrizio; Edgar A Engel; Benjamin Meyer; Veronika Juraskova; Michele Ceriotti; Clemence Corminboeuf
Journal:  J Chem Theory Comput       Date:  2022-02-18       Impact factor: 6.006

4.  How Robust Is the Reversible Steric Shielding Strategy for Photoswitchable Organocatalysts?

Authors:  Simone Gallarati; Raimon Fabregat; Veronika Juraskova; Theo Jaffrelot Inizan; Clemence Corminboeuf
Journal:  J Org Chem       Date:  2022-06-28       Impact factor: 4.198

  4 in total

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