Literature DB >> 3256732

The general modifier ("allosteric") unireactant enzyme mechanism: redundant conditions for reduction of the steady state velocity equation to one that is first degree in substrate and effector.

I H Segel1, R L Martin.   

Abstract

The general unireactant modifier mechanism in the absence of product can be described by the following linked reactions: E + S k1 in equilibrium k-1 ES k3----E + P; E + I k5 in equilibrium k-5 EI; EI + S k2 in equilibrium k-2 ESI k4----EI + P; and ES + I k6 in equilibrium k-6 ESI where S is a substrate and I is an effector. A full steady state treatment yields a velocity equation that is second degree in both [S] and [I]. Two different conditions (or assumptions) permit reduction of the velocity equation to one that is first degree in [S] and [I]. These are (a) that k-2k3 = k-1k4 (Frieden, C., J. Biol. Chem. 239, pp. 3522-3531, (1964)) and (b) that the I-binding reactions are at equilibrium (Reinhart, G. D., Arch. Biochem. Biophys. 224, pp. 389-401 (1983)). It is shown that each condition gives rise to the other (i.e., if the I-binding reactions are at equilibrium, then k-2k3 must equal k-1k4 and vice-versa). If one assumes equilibrium for the I-binding steps, the velocity equation derived by the method of Cha (J. Biol. Chem. 243, pp. 820-825 (1968)) is apparently second degree in [I] (Segel, I. H., Enzyme Kinetics, p. 838, Wiley-Interscience (1975)), but reduces to a first degree equation when the relationship derived by Frieden is inserted. If one starts by assuming a single equilibrium condition for I binding, e.g., k-5[EI] = k5[E][I] or k-6[ESI] = k6[ES][I], then a traditional algebraic manipulation of the remaining steady state equations provides first degree expressions for the concentrations of all enzyme species and also discloses the Frieden relationship.

Entities:  

Mesh:

Substances:

Year:  1988        PMID: 3256732     DOI: 10.1016/s0022-5193(88)80269-8

Source DB:  PubMed          Journal:  J Theor Biol        ISSN: 0022-5193            Impact factor:   2.691


  5 in total

1.  The steady-state rate equation for the general modifier mechanism of Botts and Morales when the quasi-equilibrium assumption for the binding of the modifier is made.

Authors:  R Varón; M García-Moreno; C Garrido; F García-Cánovas
Journal:  Biochem J       Date:  1992-12-15       Impact factor: 3.857

2.  In defence of the general validity of the Cha method of deriving rate equations. The importance of explicit recognition of the thermodynamic box in enzyme kinetics.

Authors:  C M Topham; K Brocklehurst
Journal:  Biochem J       Date:  1992-02-15       Impact factor: 3.857

3.  Inhibition of NUDEL (nuclear distribution element-like)-oligopeptidase activity by disrupted-in-schizophrenia 1.

Authors:  Mirian A F Hayashi; Fernanda C V Portaro; Marta F Bastos; Juliano R Guerreiro; Vitor Oliveira; Silvia S Gorrão; Denise V Tambourgi; Osvaldo A Sant'Anna; Paul J Whiting; L Miguel Camargo; Katsuhiro Konno; Nicholas J Brandon; Antonio C M Camargo
Journal:  Proc Natl Acad Sci U S A       Date:  2005-02-23       Impact factor: 11.205

4.  Some classical errors in the kinetic analysis of enzyme reactions.

Authors:  K Brocklehurst; C M Topham
Journal:  Biochem J       Date:  1993-11-01       Impact factor: 3.857

5.  Structure of the Mycobacterium tuberculosis D-alanine:D-alanine ligase, a target of the antituberculosis drug D-cycloserine.

Authors:  John B Bruning; Ana C Murillo; Ofelia Chacon; Raúl G Barletta; James C Sacchettini
Journal:  Antimicrob Agents Chemother       Date:  2010-10-18       Impact factor: 5.191

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.