Literature DB >> 32560103

Meta-Analysis of Microbial Communities in Hot Springs: Recurrent Taxa and Complex Shaping Factors beyond pH and Temperature.

Francisco L Massello1, Chia Sing Chan2, Kok-Gan Chan3, Kian Mau Goh2, Edgardo Donati1, María Sofía Urbieta1.   

Abstract

The study of microbial communities from extreme environments is a fascinating topic. With every study, biologists and ecologists reveal interesting facts and questions that dispel the old belief that these are inhospitable environments. In this work, we assess the microbial diversity of three hot springs from Neuquén, Argentina, using high-throughput amplicon sequencing. We predicted a distinct metabolic profile in the acidic and the circumneutral samples, with the first ones being dominated by chemolithotrophs and the second ones by chemoheterotrophs. Then, we collected data of the microbial communities of hot springs around the world in an effort to comprehend the roles of pH and temperature as shaping factors. Interestingly, there was a covariation between both parameters and the phylogenetic distance between communities; however, neither of them could explain much of the microbial profile in an ordination model. Moreover, there was no correlation between alpha diversity and these parameters. Therefore, the microbial communities' profile seemed to have complex shaping factors beyond pH and temperature. Lastly, we looked for taxa associated with different environmental conditions. Several such taxa were found. For example, Hydrogenobaculum was frequently present in acidic springs, as was the Sulfolobaceae family; on the other hand, Candidatus Hydrothermae phylum was strongly associated with circumneutral conditions. Interestingly, some singularities related to sites featuring certain taxa were also observed.

Entities:  

Keywords:  Caviahue-Copahue; Domuyo; amplicon sequencing; extreme environments; extremophiles; hot springs; microbial communities

Year:  2020        PMID: 32560103     DOI: 10.3390/microorganisms8060906

Source DB:  PubMed          Journal:  Microorganisms        ISSN: 2076-2607


  4 in total

1.  Comparative Metagenomic Analysis of Two Hot Springs From Ourense (Northwestern Spain) and Others Worldwide.

Authors:  María-Eugenia DeCastro; Juan-José Escuder-Rodríguez; Manuel Becerra; Esther Rodríguez-Belmonte; María-Isabel González-Siso
Journal:  Front Microbiol       Date:  2021-11-26       Impact factor: 5.640

2.  Thermophiles and carbohydrate-active enzymes (CAZymes) in biofilm microbial consortia that decompose lignocellulosic plant litters at high temperatures.

Authors:  Kok Jun Liew; Chee Hung Liang; Yee Ting Lau; Amira Suriaty Yaakop; Kok-Gan Chan; Saleha Shahar; Mohd Shahir Shamsir; Kian Mau Goh
Journal:  Sci Rep       Date:  2022-02-18       Impact factor: 4.379

3.  Culture-Independent Survey of Thermophilic Microbial Communities of the North Caucasus.

Authors:  Stepan V Toshchakov; Anna O Izotova; Elizaveta N Vinogradova; Gennady S Kachmazov; Albina Y Tuaeva; Vladimir T Abaev; Martha A Evteeva; Natalia M Gunitseva; Aleksei A Korzhenkov; Alexander G Elcheninov; Maxim V Patrushev; Ilya V Kublanov
Journal:  Biology (Basel)       Date:  2021-12-20

4.  The Evaluation of Bacterial Abundance and Functional Potentials in the Three Major Watersheds, Located in the Hot Spring Zone of the Tatun Volcano Group Basin, Taiwan.

Authors:  Viji Nagarajan; Hsin-Chi Tsai; Jung-Sheng Chen; Bashir Hussain; Cheng-Wei Fan; Aslia Asif; Bing-Mu Hsu
Journal:  Microorganisms       Date:  2022-02-23
  4 in total

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