Literature DB >> 32559338

Autopsy registry can facilitate COVID-19 research.

Saskia von Stillfried1, Roman David Bülow1, Rainer Röhrig2, Ruth Knüchel-Clarke1, Peter Boor1.   

Abstract

The WHO declared the global outbreak of SARS-CoV-2 a pandemic on March 11, 2020, and "call(ed) on all countries to exchange country experiences and practices in a transparent and timely way" (http://www.euro.who.int/en/health-topics/health-emergencies/pages/news/news/2020/03/who-announces-covid-19-outbreak-a-pandemic). To date, many medical societies have announced their intention to collect and analyze data from COVID-19 patients and some large-scale prospective data collections are already running, such as the LEOSS registry (Lean European Open Survey on SARS-CoV-2 Infected Patients) or the CAPACITYCOVID registry (registry of patients with COVID-19 including cardiovascular risk and complications). The necessity to mobilize and harmonize basic and applied research worldwide is of utmost importance (Sansonetti, 2020).
© 2020 The Authors. Published under the terms of the CC BY 4.0 license.

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Year:  2020        PMID: 32559338      PMCID: PMC7323227          DOI: 10.15252/emmm.202012885

Source DB:  PubMed          Journal:  EMBO Mol Med        ISSN: 1757-4676            Impact factor:   12.137


The autopsy is an important instrument to understand the pathogenesis of diseases, including infectious diseases and novel pathogens like Ebola, SARS, or SARS‐CoV‐2 (Nicholls et al, 2003; Mari Saez et al, 2015). The first autopsy studies already suggested important disease mechanisms in fatal COVID‐19 cases with potential therapeutic implications. These include increased thromboembolism and vascular dysfunction (Lax et al, 2020; Menter et al, 2020; Wichmann et al, 2020), infection of endothelial cells (Varga et al, 2020), viral spread in different organs (Puelles et al, 2020), or the pathological mechanisms of lung injury (Ackermann et al, 2020; Schaller et al, 2020). Despite this, no ongoing registry gathered autopsy data, and no specific autopsy registry existed until our recent initiative. We have established and launched the worldwide first national registry of COVID‐19 autopsies in Germany, the DeRegCOVID (Fig 1). The registry was launched in cooperation with the German professional societies of pathology and supported by the Federal Ministry of Health. It aims at gathering data on potentially all autopsies in Germany in a factually anonymized manner. The main focus is on the pathological findings and cause of death at autopsy according to the WHO recommendations, flanked by clinical disease course of the infection, known preexisting conditions, and basic demographic data. Central data curation ensures high data quality. The registry will serve as a central hub for data analyses, the results of which will be reported to the professional societies and the Federal Ministry of Health, and jointly communicated to the public. Detailed data on available biosamples, which remain decentralized with each participating center, are also gathered. This allows the registry to serve as an honest broker for national and international research inquiries, facilitating and supporting research, as recently shown in the analyses of the pulmonary involvement in COVID‐19 (Ackermann et al, 2020). The available samples from virtually all organs will enable the analyses of organ‐specific effects of COVID‐19. Interoperability with other registries, e.g. LEOSS, is being implemented. The registry also provides detailed standard operating procedures (SOP) and supports nationally and internationally centers and societies in performing COVID‐19 autopsies. Despite a non‐mandatory participation in the registry, the contribution of centers across Germany, both academic and non‐academic, is already high. Each center gets its profile and login data for the online secure platform for sustainable and prospective data reporting and management. The platform can be modularly expanded, include additional data, serve as a model for other national registries, or gather data on an international scale.
Figure 1

The German Registry for COVID‐19 Autopsies (DeRegCovid)

(A) DeRegCOVID workflow: The main aim of the registry is to centrally gather possibly all autopsy data from Germany. The registry supports centers in all questions related to COVID‐19 autopsies, e.g. providing detailed standard operating procedures. The biomaterial remains decentralized with each center. The centers report data to the registry. The registry reports the data to the pathology societies, the health authorities, i.e. German Federal Ministry of Health and Robert Koch Institute, and, jointly with these institutions, to the public. The registry also serves as an honest broker mediating national and international research inquiries to centers with available material. (B) Available material and data: More than 25 different tissues are available, mainly formalin‐fixed paraffin‐embedded (FFPE), but several centers also have unfixed frozen samples. Gathered data mainly focus on the pathological diagnosis derived from the autopsy. The registry was first launched on April 15, 2020. Green lines represent the tasks performed by the registry.

The German Registry for COVID‐19 Autopsies (DeRegCovid)

(A) DeRegCOVID workflow: The main aim of the registry is to centrally gather possibly all autopsy data from Germany. The registry supports centers in all questions related to COVID‐19 autopsies, e.g. providing detailed standard operating procedures. The biomaterial remains decentralized with each center. The centers report data to the registry. The registry reports the data to the pathology societies, the health authorities, i.e. German Federal Ministry of Health and Robert Koch Institute, and, jointly with these institutions, to the public. The registry also serves as an honest broker mediating national and international research inquiries to centers with available material. (B) Available material and data: More than 25 different tissues are available, mainly formalin‐fixed paraffin‐embedded (FFPE), but several centers also have unfixed frozen samples. Gathered data mainly focus on the pathological diagnosis derived from the autopsy. The registry was first launched on April 15, 2020. Green lines represent the tasks performed by the registry. We hope that this registry will serve as an example of how to further strengthen structured research on COVID‐19, potentially sparking and accelerating similar initiatives on an international level.

Conflict of interest

The authors declare that they have no conflict of interest.
  10 in total

1.  Postmortem Examination of Patients With COVID-19.

Authors:  Tina Schaller; Klaus Hirschbühl; Katrin Burkhardt; Georg Braun; Martin Trepel; Bruno Märkl; Rainer Claus
Journal:  JAMA       Date:  2020-06-23       Impact factor: 56.272

2.  Pulmonary Vascular Endothelialitis, Thrombosis, and Angiogenesis in Covid-19.

Authors:  Maximilian Ackermann; Stijn E Verleden; Mark Kuehnel; Axel Haverich; Tobias Welte; Florian Laenger; Arno Vanstapel; Christopher Werlein; Helge Stark; Alexandar Tzankov; William W Li; Vincent W Li; Steven J Mentzer; Danny Jonigk
Journal:  N Engl J Med       Date:  2020-05-21       Impact factor: 91.245

3.  Investigating the zoonotic origin of the West African Ebola epidemic.

Authors:  Almudena Marí Saéz; Sabrina Weiss; Kathrin Nowak; Vincent Lapeyre; Fee Zimmermann; Ariane Düx; Hjalmar S Kühl; Moussa Kaba; Sebastien Regnaut; Kevin Merkel; Andreas Sachse; Ulla Thiesen; Lili Villányi; Christophe Boesch; Piotr W Dabrowski; Aleksandar Radonić; Andreas Nitsche; Siv Aina J Leendertz; Stefan Petterson; Stephan Becker; Verena Krähling; Emmanuel Couacy-Hymann; Chantal Akoua-Koffi; Natalie Weber; Lars Schaade; Jakob Fahr; Matthias Borchert; Jan F Gogarten; Sébastien Calvignac-Spencer; Fabian H Leendertz
Journal:  EMBO Mol Med       Date:  2015-01       Impact factor: 12.137

4.  COVID-19, chronicle of an expected pandemic.

Authors:  Philippe J Sansonetti
Journal:  EMBO Mol Med       Date:  2020-05-04       Impact factor: 12.137

5.  Pulmonary Arterial Thrombosis in COVID-19 With Fatal Outcome : Results From a Prospective, Single-Center, Clinicopathologic Case Series.

Authors:  Sigurd F Lax; Kristijan Skok; Peter Zechner; Harald H Kessler; Norbert Kaufmann; Camillo Koelblinger; Klaus Vander; Ute Bargfrieder; Michael Trauner
Journal:  Ann Intern Med       Date:  2020-05-14       Impact factor: 25.391

6.  Multiorgan and Renal Tropism of SARS-CoV-2.

Authors:  Victor G Puelles; Marc Lütgehetmann; Maja T Lindenmeyer; Jan P Sperhake; Milagros N Wong; Lena Allweiss; Silvia Chilla; Axel Heinemann; Nicola Wanner; Shuya Liu; Fabian Braun; Shun Lu; Susanne Pfefferle; Ann S Schröder; Carolin Edler; Oliver Gross; Markus Glatzel; Dominic Wichmann; Thorsten Wiech; Stefan Kluge; Klaus Pueschel; Martin Aepfelbacher; Tobias B Huber
Journal:  N Engl J Med       Date:  2020-05-13       Impact factor: 91.245

7.  Endothelial cell infection and endotheliitis in COVID-19.

Authors:  Zsuzsanna Varga; Andreas J Flammer; Peter Steiger; Martina Haberecker; Rea Andermatt; Annelies S Zinkernagel; Mandeep R Mehra; Reto A Schuepbach; Frank Ruschitzka; Holger Moch
Journal:  Lancet       Date:  2020-04-21       Impact factor: 79.321

8.  Postmortem examination of COVID-19 patients reveals diffuse alveolar damage with severe capillary congestion and variegated findings in lungs and other organs suggesting vascular dysfunction.

Authors:  Thomas Menter; Jasmin D Haslbauer; Ronny Nienhold; Spasenija Savic; Helmut Hopfer; Nikolaus Deigendesch; Stephan Frank; Daniel Turek; Niels Willi; Hans Pargger; Stefano Bassetti; Joerg D Leuppi; Gieri Cathomas; Markus Tolnay; Kirsten D Mertz; Alexandar Tzankov
Journal:  Histopathology       Date:  2020-07-05       Impact factor: 5.087

9.  Lung pathology of fatal severe acute respiratory syndrome.

Authors:  John M Nicholls; Leo L M Poon; Kam C Lee; Wai F Ng; Sik T Lai; Chung Y Leung; Chung M Chu; Pak K Hui; Kong L Mak; Wilina Lim; Kin W Yan; Kwok H Chan; Ngai C Tsang; Yi Guan; Kwok Y Yuen; J S Malik Peiris
Journal:  Lancet       Date:  2003-05-24       Impact factor: 79.321

10.  Autopsy Findings and Venous Thromboembolism in Patients With COVID-19: A Prospective Cohort Study.

Authors:  Dominic Wichmann; Jan-Peter Sperhake; Marc Lütgehetmann; Stefan Steurer; Carolin Edler; Axel Heinemann; Fabian Heinrich; Herbert Mushumba; Inga Kniep; Ann Sophie Schröder; Christoph Burdelski; Geraldine de Heer; Axel Nierhaus; Daniel Frings; Susanne Pfefferle; Heinrich Becker; Hanns Bredereke-Wiedling; Andreas de Weerth; Hans-Richard Paschen; Sara Sheikhzadeh-Eggers; Axel Stang; Stefan Schmiedel; Carsten Bokemeyer; Marylyn M Addo; Martin Aepfelbacher; Klaus Püschel; Stefan Kluge
Journal:  Ann Intern Med       Date:  2020-05-06       Impact factor: 25.391

  10 in total
  12 in total

Review 1.  Pulmonary and Systemic Pathology in COVID-19.

Authors:  Danny Jonigk; Christopher Werlein; Peter D Lee; Hans-Ulrich Kauczor; Florian Länger; Maximilian Ackermann
Journal:  Dtsch Arztebl Int       Date:  2022-06-24       Impact factor: 8.251

2.  SARS-CoV-2 RNA screening in routine pathology specimens.

Authors:  Saskia von Stillfried; Sophia Villwock; Roman D Bülow; Sonja Djudjaj; Eva M Buhl; Angela Maurer; Nadina Ortiz-Brüchle; Peter Celec; Barbara M Klinkhammer; Dickson W L Wong; Claudio Cacchi; Till Braunschweig; Ruth Knüchel-Clarke; Edgar Dahl; Peter Boor
Journal:  Microb Biotechnol       Date:  2021-05-16       Impact factor: 6.575

Review 3.  [Cooperative approach of pathology and neuropathology in the COVID-19 pandemic : German registry for COVID-19 autopsies (DeRegCOVID) and German network for autopsies in pandemics (DEFEAT PANDEMIcs)].

Authors:  Saskia von Stillfried; Till Acker; Martin Aepfelbacher; Gustavo Baretton; Roman David Bülow; Karl-Friedrich Bürrig; Hans-Ulrich Holtherm; Danny Jonigk; Ruth Knüchel; Raphael W Majeed; Rainer Röhrig; Jan Wienströer; Peter Boor
Journal:  Pathologe       Date:  2021-02-16       Impact factor: 0.973

Review 4.  [Late Breaking Session Pathology and COVID-19 Report].

Authors:  P Boor; A Hartmann
Journal:  Pathologe       Date:  2020-12-11       Impact factor: 1.011

5.  Regional COVID-19 registry in Khuzestan, Iran: A study protocol and lessons learned from a pilot implementation.

Authors:  Javad Zarei; Maryam Dastoorpoor; Amir Jamshidnezhad; Maria Cheraghi; Abbas Sheikhtaheri
Journal:  Inform Med Unlocked       Date:  2021-01-19

6.  Use of Telepathology to Facilitate COVID-19 Research and Education through an Online COVID-19 Autopsy Biorepository.

Authors:  Paul V Benson; Silvio H Litovsky; Adrie J C Steyn; Camilla Margaroli; Egiebade Iriabho; Peter G Anderson
Journal:  J Pathol Inform       Date:  2021-12-01

Review 7.  [Development of a cooperative autopsy network of pathology, neuropathology and forensic medicine].

Authors:  Saskia von Stillfried; Peter Boor
Journal:  Pathologe       Date:  2021-10-29       Impact factor: 1.011

Review 8.  [Practical aspects of COVID-19 autopsies].

Authors:  Peter Boor; Philip Eichhorn; Arndt Hartmann; Sigurd F Lax; Bruno Märkl; Thomas Menter; Kristijan Skok; Julia Slotta-Huspenina; Saskia von Stillfried; Alexandar Tzankov; Gregor Weirich
Journal:  Pathologe       Date:  2021-02-24       Impact factor: 0.973

Review 9.  Cooperative approach of pathology and neuropathology in the COVID-19 pandemic : German registry for COVID-19 autopsies (DeRegCOVID) and German network for autopsies in pandemics (DEFEAT PANDEMIcs).

Authors:  Saskia von Stillfried; Till Acker; Martin Aepfelbacher; Gustavo Baretton; Roman David Bülow; Karl-Friedrich Bürrig; Hans-Ulrich Holtherm; Danny Jonigk; Ruth Knüchel; Raphael W Majeed; Rainer Röhrig; Jan Wienströer; Peter Boor
Journal:  Pathologe       Date:  2021-03-15       Impact factor: 1.011

10.  Cave canem: urine is not urine in corona times.

Authors:  Kunz Yannic; Horninger Wolfgang; Pinggera Germar-Michael
Journal:  Future Oncol       Date:  2020-11-27       Impact factor: 3.404

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