Literature DB >> 325519

Proton magnetic resonance spectra of tRNA-Met-f from Thermus thermophilus.

Y Kyogoku, T Inubushi, I Morishima, K Watanabe, T Oshima, S Nishimura.   

Abstract

220 MHz proton magnetic resonance spectra of tRNAs in bulk and tRNA-Met-f from Thermus thermophilus have been measured and compared with those of tRNAs from E. coli. Temperature dependences and chemical shift positions of the bulk tRNAs are well explained by the difference in their GC contents. It is known that the base sequence of the double helical regions in the cloverleaf structure of T. thermophilus tRNA-Met-f is different from that of E. coli tRNA-Met-f only at two positions in TpsiCarm; one more C:G pair is contained instead of a U:G pair of E. coli tRNA-Met-f and a C:G pair of E. coli is replaced by a G:C pair. In spite of the resembrance in the base sequences, nmr patterns around 13 ppm are fairly different from each other. The difference is discussed in relation with their tertiary structures and with the origin of chemical shift displacements.

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Year:  1977        PMID: 325519      PMCID: PMC342464          DOI: 10.1093/nar/4.3.585

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  27 in total

1.  Assignment of the hydrogen bonded proton resonances in (Escherichia coli) tRNAGlu by sequential melting.

Authors:  C W Hilbers; R G Shulman
Journal:  Proc Natl Acad Sci U S A       Date:  1974-08       Impact factor: 11.205

2.  Model for the secondary structure of the denaturated conformer of yeast tRNA3Leu.

Authors:  D R Kearns; Y P Wong; E Hawkins; S H Chang
Journal:  Nature       Date:  1974-02-22       Impact factor: 49.962

3.  Investigation of exchangeable protons and the extent of base pairings in yeast phenylalanine transfer RNA by high resolution nuclear magnetic resonance.

Authors:  Y P Wong; D R Kearns; B R Reid; R G Shulman
Journal:  J Mol Biol       Date:  1972-12-30       Impact factor: 5.469

4.  Ring-current shifts in the 300 MHz nuclear magnetic resonance spectra of six purified transfer RNA molecules.

Authors:  R G Shulman; C W Hilbers
Journal:  J Mol Biol       Date:  1973-06-25       Impact factor: 5.469

5.  Assignment of the low field proton nuclear magnetic resonance spectrum of yeast phenylalanine transfer RNA to specific base pairs.

Authors:  D R Lightfoot; K L Wong; D R Kearns; B R Reid; R G Shulman
Journal:  J Mol Biol       Date:  1973-06-25       Impact factor: 5.469

6.  NMR evidence for tertiary structure base pair in E. coli tRNA involving S4U8.

Authors:  K L Wong; D R Kearns
Journal:  Nature       Date:  1974-12-20       Impact factor: 49.962

7.  High resolution nuclear magnetic resonance studies of hydrogen bonded protons of tRNA in water.

Authors:  D R Kearns; D J Patel; R G Shulman
Journal:  Nature       Date:  1971-01-29       Impact factor: 49.962

8.  CD spectra of 5-methyl-2-thiouridine in tRNA-Met-f from an extreme thermophile.

Authors:  K Watanabe; T Oshima; S Nishimura
Journal:  Nucleic Acids Res       Date:  1976-07       Impact factor: 16.971

9.  Determination of secondary and tertiary structural features of transfer RNA molecules in solution by nuclear magnetic resonance.

Authors:  R G Shulman; C W Hilbers; Y P Wong; K L Wong; D R Lightfoot; B R Reid; D R Kearns
Journal:  Proc Natl Acad Sci U S A       Date:  1973-07       Impact factor: 11.205

10.  Changes in tertiary structure accompanying a single base change in transfer RNA. Proton magnetic resonance and aminoacylation studies of Escherichia coli tRNAMet f1 and tRNAMet f3 and their spin-labeled (s4U8) derivatives.

Authors:  W E Daniel; M Cohn
Journal:  Biochemistry       Date:  1976-09-07       Impact factor: 3.162

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