Literature DB >> 32551499

Robust Heterochiral Strand Displacement Using Leakless Translators.

Tracy L Mallette1, Milan N Stojanovic2,3, Darko Stefanovic1,4, Matthew R Lakin1,4.   

Abstract

Molecular computing offers a powerful framework for in situ biosensing and signal processing at the nanoscale. However, for in vivo applications, the use of conventional DNA components can lead to false positive signals being generated due to degradation of circuit components by nuclease enzymes. Here, we use hybrid chiral molecules, consisting of both l- and d-nucleic acid domains, to implement leakless signal translators that enable d-nucleic acid signals to be detected by hybridization and then translated into a robust l-DNA signal for further analysis. We show that our system is robust to false positive signals even if the d-DNA components are degraded by nucleases, thanks to circuit-level robustness. This work thus broadens the scope and applicability of DNA-based molecular computers for practical, in vivo applications.

Keywords:  DNA strand displacement; biosensing; chirality; leak; molecular computing

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Year:  2020        PMID: 32551499     DOI: 10.1021/acssynbio.0c00131

Source DB:  PubMed          Journal:  ACS Synth Biol        ISSN: 2161-5063            Impact factor:   5.110


  1 in total

1.  Direct Comparison of d-DNA and l-DNA Strand-Displacement Reactions in Living Mammalian Cells.

Authors:  Wenrui Zhong; Jonathan T Sczepanski
Journal:  ACS Synth Biol       Date:  2020-12-21       Impact factor: 5.110

  1 in total

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