| Literature DB >> 32547927 |
Evangelia Dimitriou1, Marina Moraitou1, Mónica Cozar2, Jenny Serra-Vinardell2, Lluïsa Vilageliu2, Daniel Grinberg2, Irene Mavridou1, Helen Michelakakis1.
Abstract
Gaucher disease (GD) is characterized by a marked phenotypic and genetic diversity. It is caused by the functional deficiency of the lysosomal enzyme β-glucocerebrosidase (GCase), which in most instances results from mutations in the GBA1 gene and over 500 different disease causing mutations have been described. We present the biochemical and molecular findings in 141 GD cases (14 were siblings) with the three types of the disorder diagnosed in Greece over the last 35 years. 111/141 (78%) GD patients were of Greek origin. The remaining patients were Albanian (24/141; 17%), Syrian (2/141; 1.4%), Egyptian (2/141; 1.4%), Italian (1/141; 0.7%) and Polish (1/141; 0.7%). Mutation analysis identified 28 different mutations and 37 different genotypes. Seven of the mutations were not previously reported (T231I, D283N, N462Y, LI75P, F81L, Y135S and T482K). The most frequent mutations were N370S, D409H;H255Q and L444P. Mutation D409H;H255Q was only identified in Greek and Albanian patients. Sixteen mutations, including the novel ones, were identified only in one allele. Although the N370S mutation was identified only in type 1 patients, not all of type 1 patients carried this mutation. Our results highlight the heterogeneity of Gaucher disease and support the Balkan origin of the double mutant allele D409H;H255Q.Entities:
Keywords: GBA; GBA1, Glucocerebrosidase gene; GCase, β-Glucocerebrosidase; GD; GD, Gaucher disease; Gaucher disease; Glucocerebrosidase; Greek; Mutation analysis
Year: 2020 PMID: 32547927 PMCID: PMC7284128 DOI: 10.1016/j.ymgmr.2020.100614
Source DB: PubMed Journal: Mol Genet Metab Rep ISSN: 2214-4269
Age of diagnosis and clinical characteristics of the Gaucher disease patients diagnosed in Greece.
| GD patients | Age of diagnosis | Reasons for referral |
|---|---|---|
| Type 1 | 3–77 years | Splenomegaly |
| Type 2 | Birth – 8 months | Hepatosplenomegaly |
| Type 3 | 10 months – 8 years | Hepatosplenomegaly |
Biochemical findings in the Gaucher disease patients diagnosed in Greece.
| Patients | Chitotriosidase Activity (nmoles/ml/h) | β-Glucosidase Activity WBC (nmoles/mg Protein/h) | β-Glucosidase Activity |
|---|---|---|---|
| Type 1 | 426–35,825 | 0.25–4.6 | 0–8.0 |
| Type 2 | 720–7236 | 0.25–3.5 | 0.34–4.0 |
| Type 3 | 8332–35,000 | 1.9–2.5 | 0–1.6 |
| Normal Range | 0–150 | 6–23 | 19–113 |
Two patients had zero chitotriosidase activity being homozygotes for the 24 bp duplication.
Allele distribution in our cohort of patients (n = 125).
| Mutations | |||
|---|---|---|---|
| cDNA | Protein (Traditional in GD | Protein (as recommended by HGVS | No. of alleles |
| c.1226A > G | N370S | p.N409S | 121 (49.2%) |
| c.1342G > C;c.882 T > G | D409H;H255Q | p.D448H;H294Q | 46 (18.7%) |
| c.1448 T > G | L444P | p.L483P | 25 (10.2%) |
| c.475C > T | R120W | p.R159Q | 8 (3.3%) |
| c.1505G > A | 7 (2.8%) | ||
| c.762-2A > G | 6 (2.4%) | ||
| exons 7–11 | RecNciI | 5 (2.0%) | |
| c.1043C > T | A309V | p.A348V | 3 (1.2%) |
| c.721G > A | G202R | p.G241R | 3 (1.2%) |
| c.886C > T | R257X | p.R296* | 2 (0.8%) |
| c.256C > T | R47X | p.R86* | 2 (0.8%) |
| c.260G > A | R48Q | p.R87Q | 2 (0.8%) |
| c.440A > G | Y108C | p.Y147C | 1(0.4%) |
| c.115 + 1 G > A | 1 (0.4%) | ||
| c.1603C > T | R496C | p.R535C | 1 (0.4%) |
| c.754 T > A | F213L | p.F252I | 1 (0.4%) |
| c.1049A > G | H311R | p.H350R | 1 (0.4%) |
| c.667 T > C | W184R | p.W223R | 1 (0.4%) |
| c.463 T > C | Y116H | p.Y155H | 1 (0.4%) |
| c.1342G > C | D409H | p.D448H | 1 (0.4%) |
| c.1192C > T | R359X | p.R398* | 1 (0.4%) |
| T231I | p.T270I | 1 (0.4%) | |
| N462Y | p.N501Y | 1 (0.4%) | |
| L175P | p.L214P | 1 (0.4%) | |
| F81L | p.F120L | 1 (0.4%) | |
| Y135S | p.Y174S | 1 (0.4%) | |
| D283N | p.D322N | 1 (0.4%) | |
| T482K | p.T521K | 1 (0.4%) | |
Nucleotide numbering reflects cDNA numbering with +1 corresponding to the A of the first ATG translation initiation codon in the reference cDNA sequence (M16328.1)
Traditional codon numbering begins 39 codons downstream from the first ATG.
HGVS recommended nomenclature numbers codons beginning with the first ATG as codon 1.
Mutation first described in this study which overall accounted for 1.6% of the identified alleles.
Genotypes and clinical subtypes of all diagnosed Gaucher disease patients.
| Genotypes | TYPE 1 | TYPE 2 | TYPE 3 | TOTAL |
|---|---|---|---|---|
| N370S/D409H;H255Q | 29 | 29 (23.4%) | ||
| N370S/N370S | 17 | 17 (13.7%) | ||
| N370S/L444P | 14 | 14 (11.3%) | ||
| N370S/IVS6-2A → G | 6 | 6 (4.8%) | ||
| N370S/R120W | 6 | 6 (4.8%) | ||
| N370S/IVS10-1G → A | 5 | 5 (4%) | ||
| N370S/? | 3 | 3 (2.4%) | ||
| N370S/A309V | 3 | 3 (2.4%) | ||
| N370S/RecNciI | 3 | 3 (2.4%) | ||
| N370S/R257X | 2 | 2 (1.6%) | ||
| N370S/R47X | 2 | 2 (1.6%) | ||
| N370S/R48Q | 2 | 2 (1.6%) | ||
| N370S/T231I | 1 | 1 (0.8%) | ||
| N370S/N462Y | 1 | 1 (0.8%) | ||
| N370S/L175P | 1 | 1 (0.8%) | ||
| N370S/R496C | 1 | 1 (0.8%) | ||
| N370/F213L | 1 | 1 (0.8%) | ||
| N370S/H311R | 1 | 1 (0.8%) | ||
| N370S/W184R | 1 | 1 (0.8%) | ||
| N370S/R359X | 1 | 1 (0.8%) | ||
| N370S/D283N | 1 | 1 (0.8%) | ||
| L444P/F81L | 1 | 1 (0.8%) | ||
| N370S/Y135S | 1 | 1 (0.8%) | ||
| N370S/ G202R | 1 | 1 (0.8%) | ||
| N370S/ T482K | 1 | 1 (0.8%) | ||
| L444P/ Y116H | 1 | 1 (0.8%) | ||
| D409H;H255Q/D409H; | 5 | 5 (4%) | ||
| D409H;H255Q/R120W | 2 | 2 (1.6%) | ||
| IVS10-1G → A/D409H;H255Q | 1 | 1 (0.8%) | ||
| D409H;H255Q/RecNciI | 1 | 1 (0.8%) | ||
| G202R/G202R | 1 | 1 (0.8%) | ||
| IVS2 + 1G → A/? | 1 | 1 (0.8%) | ||
| RecNcil/IVS10-1G → A | 1 | 1 (0.8%) | ||
| L444P/L444P | 3 | 3 (2.4%) | ||
| L444P/D409H;H255Q | 2 | 2 (1.6%) | ||
| D409H;H255Q/Y108C | 1 | 1 (0.8%) | ||
| L444P/D409H | 1 | 1 (0.8%) |
Genotypes and clinical subtypes of Gaucher disease patients of Greek origin.
| Genotypes | TYPE 1 | TYPE 2 | TYPE 3 | TOTAL |
|---|---|---|---|---|
| N370S/D409H;H255Q | 19 | 19 (19.4%) | ||
| N370S/N370S | 14 | 14 (14.3%) | ||
| N370S/L444P | 9 | 9 (9.2%) | ||
| N370S/IVS6-2A → G | 6 | 6 (6.1%) | ||
| N370S/R120W | 5 | 5 (5.1%) | ||
| N370S/IVS10-1G → A | 5 | 5 (5.1%) | ||
| N370S/? | 3 | 3 (3.1%) | ||
| N370S/A309V | 3 | 3 (3.1%) | ||
| N370S/RecNciI | 3 | 3 (3.1%) | ||
| N370S/R257X | 2 | 2 (2.0%) | ||
| N370S/R48Q | 2 | 2 (2.0%) | ||
| N370S/R47X | 1 | 1 (1.0%) | ||
| N370S/T231I | 1 | 1 (1.0%) | ||
| N370S/N462Y | 1 | 1 (1.0%) | ||
| N370/F213L | 1 | 1 (1.0%) | ||
| N370S/H311R | 1 | 1 (1.0%) | ||
| N370S/W184R | 1 | 1 (1.0%) | ||
| N370S/R359X | 1 | 1 (1.0%) | ||
| L444P/F81L | 1 | 1 (1.0%) | ||
| N370S/Y135S | 1 | 1 (1.0%) | ||
| N370S/ G202R | 1 | 1 (1.0%) | ||
| N370S/ D283N | 1 | 1 (1.0%) | ||
| N370S/ T482K | 1 | 1 (1.0%) | ||
| L444P/ Y116H | 1 | 1 (1.0%) | ||
| D409H;H255Q/D409H;H255Q | 2 | 2 (2.0%) | ||
| D409H;H255Q/R120W | 2 | 2 (2.0%) | ||
| IVS101G → A/ | 1 | 1 (1.0%) | ||
| D409H;H255Q/RecNciI | 1 | 1 (1.0%) | ||
| G202R/G202R | 1 | 1 (1.0%) | ||
| IVS2 + 1G → A/? | 1 | 1 (1.0%) | ||
| RecNcil/IVS10-1G → A | 1 | 1 (1.0%) | ||
| L444P/L444P | 2 | 2 (20%) | ||
| L444P/D409H;H255Q | 1 | 1 (1.0%) | ||
| D409H;H255Q/Y108C | 1 | 1 (1.0%) | ||
| L444P/D409H | 1 | 1 (1.0%) |
Genotypes, Clinical subtypes and origin of non-Greek Gaucher disease patients.
| GENOTYPES | Origin | TYPE 1 | TYPE 2 | TYPE 3 | TOTAL |
|---|---|---|---|---|---|
| N370S/D409H;H255Q | Albanian (10) | 10 | 10 (37%) | ||
| N370S/L444P | Syrian (1) | 5 | 5 (18.5%) | ||
| N370S/N370S | Albanian (3) | 3 | 3 (11.1%) | ||
| N370S/R47X | Albanian (1) | 1 | 1 (3.7%) | ||
| N370S/L175P | Albanian (1) | 1 | 1 (3.7%) | ||
| N370S/R496C | Albanian (1) | 1 | 1 (3.7%) | ||
| N370S/R120W | Albanian (1) | 1 | 1 (3.7%) | ||
| D409H;H255Q/D409H; | Albanian (3) | 3 | 3 (11.1%) | ||
| L444P/L444P | Egyptian (1) | 1 | 1 (3.7%) | ||
| L444P/D409H;H255Q | Albanian (1) | 1 | 1 (3.7%) |
In silico prediction of the effect of the novel GBA mutations identified in this study.
| cDNAa | Protein (Traditional in GDb) | Protein (as recommended by HGVSc) | Pathogenicity Poly Phen SIFT MUT TASTER | ||
|---|---|---|---|---|---|
| c.809C > T | Thr231Ile | p.T270I | pr da | da | dis causing |
| c.1501 A > T | Asn462Tyr | p.N501Y | pr da | da | dis causing |
| c.641 T > C | Leu175Pro | p.L214P | pr da | da | dis causing |
| c.358 T > C | Phe81Leu | p.F120L | pr da | da | dis causing |
| c.521 A > C | Tyr135Ser | p.Y174S | pr da | da | dis causing |
| c.1562C > A | Thr482Lys | p.T521K | be | da* | be |
| c.964G > A | Asp283Asn | p.D322N | pr da | da | dis causing |