| Literature DB >> 32547886 |
Haidong Wang1, Chao Wang2, Xingfa Song1, Hai Liu1, Yun Zhang1, Pei Jiang3.
Abstract
BACKGROUND: Coronary artery disease (CAD) and depression cause great burden to society and frequently co-occur. The exact mechanisms of this comorbidity are unclear. FK506-binding protein 51 (FKBP51) is correlated with cardiovascular disease and depression. The aim of this study was to determine the role of the seven single nucleotide polymorphisms (SNPs) of FKBP5 that code FKBP51, namely, rs1360780 (C>T), rs2817032 (T>C), rs2817035 (G>A), rs9296158 (G>A), rs9470079 (G>A), rs4713902 (T>C), and rs3800373 (C>T) in a patient's susceptibility to comorbid CAD and depression.Entities:
Keywords: Coronary artery disease; Depression; FKBP5; Polymorphisms
Year: 2020 PMID: 32547886 PMCID: PMC7275678 DOI: 10.7717/peerj.9286
Source DB: PubMed Journal: PeerJ ISSN: 2167-8359 Impact factor: 2.984
Primers of FKBP5 genes used in the PCR.
| SNP | Ancestor allele | Primer sequence | Product size |
|---|---|---|---|
|
| C | 5′-ACGTTGGATGTGCCAGCAGTAGCAAGTAAG-3′ 5′-ACGTTGGATGCAGGCACAGAAGGCTTTCAC-3′ | 88 |
|
| T | 5′- ACGTTGGATGTTTCACAGGTACCCCATTCC-3′ 5′-ACGTTGGATGAATATCACAGGCTTGCTGGG-3′ | 103 |
|
| G | 5′-ACGTTGGATGGTTGCAAACAGAGGTAGGAG-3′ 5′- ACGTTGGATGCTCTTTTCTCCTAGGATCCC-3′ | 99 |
|
| G | 5′- ACGTTGGATGGACCTGGTAATATCACTCTC-3′ 5′- ACGTTGGATGCTGGGCTAGGGGTAATTCAA-3′ | 118 |
|
| G | 5′- ACGTTGGATGGCCTCCCAAAATGCTATATC-3′ 5′-ACGTTGGATGATACCATACTCTAGGCTGGG-3′ | 104 |
|
| T | 5′-ACGTTGGATGGGAGCCAAAACATGAAGAGC-3′ 5′-ACGTTGGATGTAGGCAACCTGTATAAGCTG-3′ | 99 |
|
| C | 5′-ACGTTGGATGTGACTTTTTAGTACTAAGC-3′ 5′-ACGTTGGATGCCCTAGTGTAGAAGAGCAAC-3′ | 101 |
Demographic and clinical characteristics of the participants.
| Variables | CAD ( | Controls ( | CAD+D ( | CAD-D ( | |||
|---|---|---|---|---|---|---|---|
| Age (yrs) | 56.2 ± 10.4 | 52.9 ± 10.2 | 0.887 | 57.1 ± 10.2 | 0.977 | 55.5 ± 10.5 | 0.820 |
| Gender (M/F, n) | 128/142 | 52/61 | 0.804 | 53/70 | 0.651 | 75/72 | 0.424 |
| Smoking (n, %) | 88, 32.5 | 28, 24.8 | 0.129 | 36, 29.3 | 0.438 | 52, 35.3 | 0.067 |
| Drinking (n, %) | 93, 34.4 | 33, 29.2 | 0.319 | 35, 28.4 | 0.899 | 58, 39.4 | 0.086 |
| BMI (kg/m2) | 24.3 ± 3.3 | 24.0 ± 3.0 | 0.205 | 24.4 ± 3.6 | 0.119 | 24.2 ± 2.9 | 0.983 |
Notes.
CAD versus Controls.
CAD+D versus Controls.
CAD+D versus CAD-D.
coronary heart disease
CHD with depression
CAD without depression
Genotypic and allelic distribution of seven FKBP5 genes between all CAD patients (n = 270) and Controls (n = 113).
| SNP | Genotype/ allele | Case,(%) | Control,(%) | OR (95% CI) | ||
|---|---|---|---|---|---|---|
|
| CC | 134 (49.6) | 60 (53.1) | 0.644 (0.879) | 1.00 | Referent |
| CT | 121 (44.8) | 49 (43.4) | 1.106 (0.705–1.735) | 0. 622 | ||
| TT | 15 (5.6) | 4 (3.5) | 1.679 (0.535–5.272) | 0.375 | ||
| CT+TT | 136 (50.4) | 53 (46.9) | 0.536 (0.383) | 1.149 (0.740–1.784) | 0.563 | |
| C | 389 (72.0) | 169 (74.8) | 0.437 (0.605) | 1.00 | Referent | |
| T | 151 (28.0) | 57 (25.2) | 1.151 (0.808–1.640) | 0.151 | ||
|
| TT | 142 (52.6) | 69 (61.1) | 0.253 (2.748) | 1.00 | Referent |
| TC | 108 (40.0) | 39 (34.5) | 1.346 (0.845–2.144) | 0.211 | ||
| CC | 20 (7.4) | 5 (4.4) | 1.944 (0.700–5.397) | 0.202 | ||
| TC+CC | 128 (47.4) | 44 (38.9) | 0.129 (2.310) | 1.414 (0.904–2.211) | 0.129 | |
| T | 392 (72.6) | 177 (78.3) | 0.098 (2.734) | 1.00 | Referent | |
| C | 148 (27.4) | 49 (21.7) | 1.364 (0.943–1.972) | 0.099 | ||
|
| GG | 121 (44.8) | 61 (54.0) | 0.040 (6.429) | 1.00 | Referent |
| GA | 138 (51.1) | 52 (46.0) | 1.338 (0.859–2.084) | 0.198 | ||
| AA | 11 (4.1) | 0 (0.0) | – | – | ||
| GA+AA | 149 (55.2) | 52 (46.0) | 0.101 (2.685) | 1.445 (0.930–2.245) | 0.102 | |
| G | 380 (70.4) | 174 (77.0) | 0.062 (3.489) | 1.00 | Referent | |
| A | 160 (29.6) | 52 (23.0) | 1.409 (0.982–2.021) | 0.062 | ||
|
| GG | 112 (41.5) | 47 (41.6) | 0.994 (0.013) | 1.00 | Referent |
| GA | 121 (44.8) | 51 (45.1) | 0.996 (0.621–1.597) | 0.985 | ||
| AA | 37 (13.7) | 15 (13.3) | 1.035 (0.519–2.064) | 0.922 | ||
| GA+AA | 158 (58.5) | 66 (58.4) | 0.984 (0.000) | 1.005 (0.643–1.569) | 0.984 | |
| G | 345 (63.9) | 145 (64.2) | 0.943 (0.005) | 1.00 | Referent | |
| A | 195 (36.1) | 81 (35.8) | 1.012 (0.732–1.398) | 0.943 | ||
|
| GG | 146 (54.1) | 42 (37.2) | 0.010 (9.121) | 1.00 | Referent |
| GA | 102 (37.8) | 58 (51.3) | 0.506 (0.316–0.810) | 0.005 | ||
| AA | 22 (8.1) | 13 (11.5) | 0.487 (0.226–1.048) | 0.066 | ||
| GA+AA | 124 (45.9) | 71 (62.8) | 0.003 (9.110) | 0.502 (0.320–0.788) | 0.003 | |
| G | 394 (73.0) | 142 (62.8) | 0.005 (7.783) | 1.00 | Referent | |
| A | 146 (27.0) | 84 (37.2) | 0.626 (0.450–0.871) | 0.005 | ||
|
| TT | 145 (53.7) | 73 (64.6) | 0.114 (4.351) | 1.00 | Referent |
| TC | 109 (40.4) | 33 (29.2) | 1.663 (1.029–2.688) | 0.038 | ||
| CC | 16 (5.9) | 7 (6.2) | 1.151 (0.435–2.921) | 0.768 | ||
| TC+CC | 125 (46.3) | 40 (35.4) | 0.049 (3.858) | 1.573 (0.999–2.477) | 0.050 | |
| T | 399 (73.9) | 179 (79.2) | 0.119 (2.430) | 1.00 | Referent | |
| C | 141 (26.1) | 47 (20.8) | 1.346 (0.999–2.477) | 0.120 | ||
|
| CC | 72 (26.7) | 36 (31.9) | 0.422 (1.724) | 1.00 | Referent |
| CA | 182 (67.4) | 73 (64.6) | 2.000 (0.623–6.421) | 0.244 | ||
| AA | 16 (5.9) | 4 (3.5) | 1.247 (0.769–2.022) | 0.372 | ||
| CA+AA | 198 (73.3) | 77 (68.1) | 0.980 (0.001) | 0.994 (0.607–1.625) | 0.980 | |
| C | 326 (60.4) | 145 (64.2) | 0.326 (0.966) | 1.00 | Referent | |
| A | 214 (39.6) | 81 (35.8) | 1.175 (0.852–1.621) | 0.326 |
Notes.
confidence interval
odds ratio
P < 0.05.
P value for genotype and allelefrequencies in cases and controls using 2-sided χ2 test.
P values adjusted by age and genderusing logistic regression.
Genotypic and allelic distribution of FKBP5 (rs9470079) genes between female CAD patients (n = 142) and Controls (n = 61).
| SNP | Genotype/ allele | Case,(%) | Control,(%) | OR (95% CI) | ||
|---|---|---|---|---|---|---|
|
| GG | 85 (59.9) | 23 (37.7) | 0.014 (8.540) | 1.00 | Referent |
| GA | 58 (40.8) | 31 (50.8) | 0.419 (0.220–0.799) | 0.008 | ||
| AA | 9 (6.3) | 7 (11.5) | 0.348 (0.117–1.035) | 0.058 | ||
| GA+AA | 57 (47.1) | 38 (62.3) | 0.004 (8.412) | 0.406 (0.219–0.752) | 0.004 | |
| G | 210 (73.9) | 77 (63.1) | 0.009 (6.804) | 1.00 | Referent | |
| A | 66 (26.1) | 45 (36.9) | 0.545 (0.344–0.862) | 0.010 |
Notes.
confidence interval
odds ratio
P < 0.05.
P value for genotype and allelefrequencies in cases and controls using 2-sided χ2 test.
P values adjusted by age and genderusing logistic regression.
Genotypic and allele Distribution of seven FKBP polymorphisms among the CAD with depression group, CAD without depression group and control group.
| SNP | 1 | 2 | 3 | ||||
|---|---|---|---|---|---|---|---|
| CAD +H ( | CAD−H ( | Control ( | 1vs.2 | 1vs.3 | 2vs.3 | ||
|
| CC | 60 (48.8) | 74 (50.3) | 60 (53.1) | 0.968 | 0.650 | 0.739 |
| CT | 56 (45.5) | 65 (44.2) | 49 (43.4) | ||||
| TT | 7 (5.7) | 8 (5.5) | 4 (3.5) | ||||
| C | 176 (48.8) | 213 (48.8) | 169 (48.8) | 0.816 | 0.429 | 0.551 | |
| T | 70 (48.8) | 81 (48.8) | 57 (48.8) | ||||
|
| TT | 63 (51.2) | 79 (53.7) | 69 (61.1) | 0.733 | 0.301 | 0.334 |
| TC | 52 (42.3) | 56 (38.1) | 39 (34.5) | ||||
| CC | 8 (6.5) | 12 (8.2) | 5 (4.4) | ||||
| T | 178 (48.8) | 214 (48.8) | 177 (48.8) | 0.991 | 0.134 | 0.148 | |
| C | 68 (48.8) | 80 (48.8) | 49 (48.8) | ||||
|
| GG | 52 (42.3) | 67 (45.6) | 61 (54.0) | 0.665 | 0.021 | 0.098 |
| GA | 65 (52.8) | 75 (51.0) | 52 (46.0) | ||||
| AA | 6 (4.9) | 5 (3.4) | 0 (0.0) | ||||
| G | 169 (48.8) | 209 (48.8) | 174 (48.8) | 0.546 | 0.043 | 0.130 | |
| A | 77 (48.8) | 85 (48.8) | 52 (48.8) | ||||
|
| GG | 53 (43.1) | 59 (40.1) | 47 (41.6) | 0.590 | 0.903 | 0.865 |
| GA | 56 (45.5) | 65 (44.2) | 51 (45.1) | ||||
| AA | 14 (11.4) | 23 (15.7) | 15 (13.3) | ||||
| G | 162 (48.8) | 183 (48.8) | 145 (48.8) | 0.385 | 0.700 | 0.654 | |
| A | 84 (48.8) | 111 (48.8) | 81 (48.8) | ||||
|
| GG | 71 (57.7) | 75 (51.0) | 42 (37.2) | 0.462 | 0.006 | 0.083 |
| GA | 44 (35.8) | 58 (39.5) | 58 (51.3) | ||||
| AA | 8 (6.5) | 14 (9.5) | 13 (11.5) | ||||
| G | 186 (48.8) | 208 (48.8) | 142 (48.8) | 0.205 | 0.003 | 0.056 | |
| A | 60 (48.8) | 86 (48.8) | 84 (48.8) | ||||
|
| TT | 62 (50.4) | 83 (56.5) | 73 (64.6) | 0.140 | 0.088 | 0.139 |
| TC | 50 (40.7) | 59 (40.1) | 33 (29.2) | ||||
| CC | 11 (8.9) | 5 (3.4) | 7 (6.2) | ||||
| T | 174 (48.8) | 225 (48.8) | 179 (48.8) | 0.127 | 0.034 | 0.468 | |
| C | 72 (48.8) | 69 (48.8) | 47 (48.8) | ||||
|
| CC | 35 (28.5) | 37 (25.2) | 36 (31.9) | 0.702 | 0.773 | 0.302 |
| CA | 82 (66.7) | 100 (68.0) | 73 (64.6) | ||||
| AA | 6 (4.8) | 10 (6.8) | 4 (3.5) | ||||
| C | 152 (48.8) | 174 (48.8) | 145 (48.8) | 0.538 | 0.594 | 0.248 | |
| A | 94 (48.8) | 120 (48.8) | 81 (48.8) | ||||
Notes.
confidence interval
odds ratio
CAD with depression
CAD without depression
P value for genotype and allele frequencies in cases and controls using 2-sided χ2 test.
P values adjusted by age and gender using logistic regression.
P < 0.05.
Genotypic and Allelic Distribution of FKBP5 (rs9470079) polymorphisms among the three studied groups between different genders.
| SNP | 1 | 2 | 3 | ||||
|---|---|---|---|---|---|---|---|
| CAD +H | CAD−H | Control | 1vs.2 | 1vs.3 | 2vs.3 | ||
| Males | |||||||
| GG | 29 (54.7) | 32 (42.7) | 19 (36.5) | 0.236 | 0.148 | 0.679 | |
| GA | 21 (39.6) | 33 (44.0) | 27 (52.0) | ||||
| AA | 3 (5.7) | 10 (13.3) | 6 (11.5) | ||||
| G | 79 (74.5) | 97 (64.7) | 65 (62.5) | 0.094 | 0.060 | 0.724 | |
| A | 27 (25.5) | 53 (35.3) | 39 (37.5) | ||||
| Females | |||||||
| GG | 42 (60.0) | 43 (59.7) | 23 (37.7) | 0.975 | 0.039 | 0.036 | |
| GA | 23 (32.9) | 25 (34.7) | 31 (50.8) | ||||
| AA | 5 (7.1) | 4 (5.6) | 7 (11.5) | ||||
| G | 107 (76.4) | 111 (77.1) | 77 (63.1) | 0.896 | 0.019 | 0.013 | |
| A | 33 (23.6) | 33 (22.9) | 45 (36.9) | ||||
Notes.
CAD with depression
CAD without depression
P < 0.05.