| Literature DB >> 32546844 |
Rafael Pablo Lozano1, Ricardo Pérez-de la Fuente2, Eduardo Barrón3, Ana Rodrigo3, José Luis Viejo4, Enrique Peñalver5.
Abstract
Fossilized remains preserved in amber provide abundant data on the paleobiota surrounding theEntities:
Mesh:
Substances:
Year: 2020 PMID: 32546844 PMCID: PMC7297994 DOI: 10.1038/s41598-020-66631-4
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Figure 1Banding pattern in a kidney-shaped amber piece from Rábago/El Soplao amber and fungal colonization. (a) Surface appearance of the piece. (b) Polished section of the same piece (1 mm thick; preparation 18067). Note the areas where the layers with high and low density of pseudoinclusions are evident. (c) Long-wave ultraviolet light image of the same section. The darker (less fluorescent) layers are the richest in pseudoinclusions and thus richest in fossilized phloem sap. (d) Drawing of the same amber piece, showing layers with low, moderate, and high concentration of pseudoinclusions (white, light grey and dark grey, respectively) and fungal colonization (black). (e) Magnified inset in (d), showing how fungal colonization took place preferentially along resin layers richest in pseudoinclusions (richest in fossilized phloem sap). (f) Detail of pseudoinclusion-rich amber layer shown in (e). (g) Front of advance of a fungal colonization (mycelium) shown in (e). Scale bars: 3 cm (a–d), 2 mm (e), 0.5 mm (f–g). Illustration created using CorelDRAW Graphics Suite X8 (www.coreldraw.com).
Figure 2Layers of pseudoinclusions in kidney-shaped amber pieces. (a) Amber section where deformed and undeformed layers are found together (from preparation 18068). (b) Detail of the contact between deformed and undeformed amber layers in (a), showing deformed and undeformed pseudoinclusions, respectively. (c) Layer rich in pseudoinclusions (at the middle of the photograph) cutting off previous layers (or resin inputs) (from preparation 18070). Scale bars: 3 mm (a), 1 mm (b), 300 µm (c). Illustration created using CorelDRAW Graphics Suite X8 (www.coreldraw.com).
Figure 3General aspect of pseudoinclusions showing the manner in which the phloem sap is present in the amber pieces, and the different degrees of deformation of the pseudoinclusions. Pseudoinclusions as seen with Light (a‒j) and Scanning Electron Microscopy (k‒o, k and l with BSE). (a‒c) Undeformed, nearly spherical pseudoinclusions (from preparations 18068, 18069 and 18711). (d‒f) Moderately deformed, ovoid pseudoinclusions (from preparation 18068). Note that the pseudoinclusion shown in (e) was analyzed with MRS, EMP and LSCM. (g) Large, highly deformed, elongate pseudoinclusion (from preparation 18068). (h) Undeformed pseudoinclusion of irregular morphology (from preparation 18711). (i‒j) Moderately deformed pseudoinclusion of irregular morphology (from preparation 18711). Arrows in (b) and (j) point to one of the light spheroids/ellipsoids (respectively) composing the pseudoinclusions and surrounded by dark matter. (k‒l) Moderately deformed, ovoid pseudoinclusions imaged at polished amber (from preparation 18068). Note the presence of electron-dense (mineralized) sub-inclusions located within the dark matter (arrows). (m) Moderately deformed, ovoid pseudoinclusion imaged on a broken amber surface (from sample 18614). Scale bars: 30 µm (a,c), 50 µm (b,d,f,g,h,i,j), 100 µm (e), 20 µm (k,l,m).
Figure 4Histogram of size frequencies in two layers with high density of undeformed pseudoinclusions. Measurements taken from preparation 18068. Scale bar: 300 µm.
Figure 5Measured spectroscopic profiles from Rábago/El Soplao amber, (a‒c) are FT-IR spectra and (d‒f) are MRS spectra; and MRS profiles of sugars (g‒i) taken from the literature. (a) Measured profile from a pseudoinclusion-rich amber fraction. (b) Measured profile from a pseudoinclusion-void amber fraction. (c) Orange amber from Rábago/El Soplao, extracted from[19]. (d) Measured profile from amber matrix. (e‒f) Measured profiles from the dark matter partly constituting the pseudoinclusions (each from a section belonging to different kidney-shaped pieces mounted on preparation 18068). (g) Profile of D-(-)-fructose; extracted from[33]. (h) Profile of b-D-glucose; extracted from[33]. (i) Profile of crystalline sucrose; extracted from[32]. Illustration created using CorelDRAW Graphics Suite X8 (www.coreldraw.com).
Chemical composition of amber, dark matter/phloem sap and mineralized sub-inclusions (aggregates).
| Element | Amber | DM | C-Ca aggregates | C-Ca-Mg aggregates | Ca-P aggregates | C-K-Al aggregates |
|---|---|---|---|---|---|---|
| C | 82.51 | 74.56 | 45.22 | 54.67 | 3.36 | 58.83 |
| O | 6.81 | 9.19 | 27.52 | 23.09 | 38.83 | 14.40 |
| S | 5194 | 33367 | 4367 | 4295 | 2963 | 11400 |
| Ca | 329 | 1427 | 194816 | 82050 | 365043 | 1440 |
| Mg | 157 | 957 | 641 | 26475 | 1193 | 1390 |
| K | 139 | 3556 | 750 | 795 | 1473 | 128140 |
| Na | (34) | 420 | 277 | 550 | 3147 | 6500 |
| Fe | (185) | (595) | (850) | 0 | 1230 | (660) |
| Ti | (298) | (273) | 643 | 390 | 565 | 0 |
| P | (56) | (120) | 1926 | 200 | 152373 | 0 |
| Al | 150 | 408 | 246 | 895 | 1840 | 28180 |
| Cl | 206 | 2231 | n.d. | n.d. | n.d. | n.d. |
| Total | 90.00 | 88.08 | 93.19 | 89.33 | 95.17 | 91.01 |
| H* | 10.00 | 11.92 | n.d. | n.d. | n.d. | n.d. |
| n | 27 | 20 | 7 | 2 | 3 | 1 |
All mean values obtained by EMP in three sections from different kidney-shaped pieces mounted on preparation 18068. C, O, H and Total data are in wt%, the rest in ppm. Hydrogen (H*) = 100-Total. Values for elements below the detection limit are shown between parentheses. Abbreviations: DM, dark matter/ phloem sap; n, number of measurements; n.d., not determined.
Figure 6Chemical composition of pseudoinclusions. (a) Chemical composition map of a moderately deformed pseudoinclusion. Note how Ca and Mg are concentrated in mineralized sub-inclusions. Data obtained from a pseudoinclusion in preparation 18068 (left: BSE image) using EMP. Vertical lines in the C map are due to deterioration of the amber surface during scanning using the LDE1 multilayer diffracting crystal. (b) Chemical composition (lateral profile) of an irregular pseudoinclusion. Data obtained from a pseudoinclusion in preparation 18068 (top: BSE image) using EMP. Scale bars: 20 µm. Illustration created using Adobe Photoshop CS2, version 9.0 (www.adobe.com).
Figure 7LSCM images of two pseudoinclusions at different magnification. Images taken from two sections obtained from different kidney-shaped pieces and mounted on preparation 18068. (a) Amber autofluorescence detected between 410 and 560 nm (max. at 437 nm) using 405 nm laser excitation. Note how under this excitation the dark matter (= fossilized phloem sap) is not fluorescent. (b) Dark matter/phloem sap autofluorescence detected between 570 and 700 nm (max. at 576 nm), using 552 nm laser excitation. (c) Reflection of mineralized sub-inclusions using 488 nm laser excitation. (d) Composite of (a–c) images by superimposing their pseudocolors. (e–h) Same as (a–d), respectively, but in a larger pseudoinclusion (ca. 200 ×300 µm; see Fig. 3e). Blue and red pseudocolors correspond to 405 and 552 nm laser excitation, respectively. Green pseudocolor in reflection mode appeared after excitation by 488 nm light. Scale bars: 15 µm (a–d), 50 µm (e–h).
Figure 8Fluorescence emission in Rábago/El Soplao amber. (a) Fluorescence emission spectra from the “only amber” (continuous line) and “pseudoinclusions” (dashed line) experiments (each from a section obtained from different kidney-shaped pieces and mounted on preparation 18068). (b) “Only amber experiment”. The two spectra obtained with 488 and 552 nm laser excitation have been magnified 10× for improved visualization (brown line, sowing blue amber Dominican Republic spectrum to comparison, from the literature[44]). (c) “Pseudoinclusions experiment” (area corresponding to Fig. 7e–h, from a pseudoinclusion shown in Fig. 3e). The three spectra obtained with 488, 552 and 638 nm laser excitation (dark matter/phloem sap fluorescence) have been magnified 4× for improved visualization. Illustration created using CorelDRAW Graphics Suite X8 (www.coreldraw.com).