| Literature DB >> 32542305 |
Adriana S Melo1, Geyner A S Cruz1,2, Aline P Félix1, Marília F Rocha1, Vilma Loreto3, Rita C Moura1.
Abstract
The grasshopper Rhammatocerus brasiliensis shows polymorphism of B chromosomes, but the magnitude of B-chromosome occurrence and the factors that may contribute to their dispersion in the species remain unknown thus far. The present study analyzed the occurrence and dispersion of B chromosomes in R. brasiliensis individuals from 21 populations widely distributed in the Brazilian Northeast. The genetic connectivity between 10 populations was verified through analysis of ISSR markers from 200 individuals. Of the 21 populations, 19 presented individuals with one B chromosome, three with two, and one with three B chromosomes. The B chromosome is of medium size and constitutive heterochromatin (CH) located in the pericentromeric region. A variant B chromosome was observed in three populations, similar in size to that of chromosome X, gap and CH, and located in the terminal region. B chromosome frequencies in different populations varied from 0% to 18,8%, mean 8,5%. The wide distribution of the B chromosome is likely a consequence of the positive gene flow among the analyzed populations. B-chromosome occurrence in populations of R. brasiliensis possibly follows the population genetic structure of the species and, owing to the existence of a variant, its origin may not be recent.Entities:
Year: 2020 PMID: 32542305 PMCID: PMC7295183 DOI: 10.1590/1678-4685-GMB-2019-0077
Source DB: PubMed Journal: Genet Mol Biol ISSN: 1415-4757 Impact factor: 1.771
Figure 1Partial map of the Brazilian Northeast indicating the sampling locations of Rhammatocerus brasiliensis populations. Aracaju (ARA) – SE; Maceió (MAC) – AL; João Pessoa (JP) – PB; Itamaracá (ITA) – PE; Vitória de Santo Antão (VIT) – PE; Goiana (GOI) – PE; Gravatá (GRA) – PE; Bonito (BON) – PE; Toritama (TOR) – PE; Saloá (SAL) – PE; Buíque (BUI) – PE; Lagoa do Carro (LC) – PE; Surubim (SUR) – PE; Bezerros (BEZ) – PE; Serra Talhada (ST) – PE; Ouricuri (OUR) – PE; Juazeiro do Norte (JN) – CE; Picos (PIC) – PI; Sobradinho (SOB) – BA; Itaberaba (ITAB) – BA; and Rio de Contas (RC) – BA. Circles indicate populations with karyotyped individuals. Stars indicate populations with karyotyped individuals also analyzed for population genetics.
State, mesoregion, altitude and geographic coordinate for the sampled populations of Rhammatocerus brasiliensis in the Northeast of Brazil.
| State/ Mesoregion | Locality | Altitude | Geographic coordinates | Predominant biome / sampled area |
|---|---|---|---|---|
| Pernambuco/ Metropolitana do Recife | ITA - PE | 3 m | 07°45’0”S; 34°05’10”W | Atlantic forest - Mangrove/open area |
| GOI - PE | 13 m | 07º33’38”S; 35º00’9”W | Atlantic forest - Restinga/open area | |
| Pernambuco/ Zona da Mata | VIT - PE | 162 m | 08º07’35”S; 35º18’27”W | Atlantic forest/open area |
| LC - PE | 128 m | 07º50’56”S; 35º19’14”W | Atlantic forest/open area | |
| Pernambuco/ Agreste | GRA - PE | 447 m | 08º12’04”S; 35º33’53”W | Atlantic forest - Brejo de altitude/open area |
| SAL - PE | 745m | 08º58’33”S; 35º41’15”W | Caatinga/open area | |
| BON - PE | 443 m | 08º28’13”S; 35º43’43”W | Atlantic forest - Brejo de Altitude/open area | |
| BUI - PE | 798 m | 08º37’23”S; 37º09’21”W | Atlantic forest - Brejo de Altitude/open area | |
| SUR - PE | 394 m | 07º59’31”S; 38º17’54”W | Caatinga/open area | |
| BEZ - PE | 470 m | 08º14’00”S; 35º47’49”W | Atlantic forest - Brejo de Altitude/open area | |
| TOR - PE | 349 m | 08°00’24”S; 36°03’24”W | Caatinga/open area | |
| Pernambuco/ Sertão | ST - PE | 444 m | 07º49’59”S; 35º45’17”W | Caatinga/open area |
| OUR - PE | 451 m | 07º52’57”S; 40º04’54”W | Caatinga/open area | |
| Aracaju/ Leste Sergipano | ARA - SE | 4 m | 10º59’07”S; 37º04’24”W | Atlantic forest - Restinga/open area |
| Alagoas/ Leste Alagoano | MAC - AL | 4 m | 09º39’59”S; 35º44’06”W | Atlantic forest - Restinga/open area |
| Paraíba/ Mata Paraibana | JP - PB | 37m | 07º06’54”S; 34º51’47”W | Atlantic forest - Restinga/open area |
| Ceará/ Sul Cearense | JN - CE | 377 m | 07º12’47”S; 39º18’55”W | Caatinga/open area |
| Piauí/ Sudeste Piauiense | PIC - PI | 206 m | 07º04’37”S; 41º28’01”W | Caatinga/open area |
| Bahia/ Vale São Franciscano | SOB - BA | 0 m | 09º27’19”S; 40º49’24”W | Caatinga/open area |
| Bahia/ Centro-Sul | RC - BA | 999 m | 13º34’44”S; 41º48’41”W | Caatinga/open area |
| Bahia/ Centro-Norte | ITAB - BA | 265 m | 12º31’39”S; 40º18’25”W | Caatinga/open area |
Figure 2Meiotic cells of the species Rhammatocerus brasiliensis conventionally stained (a, b, c) and C-banded (d, e). a, c, d, e) Diplotene stage with one B chromosome. b) Diakinesis with two B chromosomes. c) Observe the variant B and the insect with three variant B chromosomes. Bar = 5 μm.
Occurrence, distribution, frequency and confidence interval of B chromosomes in the analyzed populations of Rhammatocerus brasiliensis in the Northeast of Brazil.
| Locality | Individuals 1B | Individuals > 1B | Total | Prevalence (%) | Confidence Interval 95% | Number of individuals analyzed / reference |
|---|---|---|---|---|---|---|
| ITA - PE | 8 | 2 | 73 | 13.69 | 7.2 - 23% | 27/ |
| GOI - PE | 4 | 36 | 11.11 | 3.6 - 25% | Present study | |
| VIT - PE | 11 | 101 | 10.89 | 5.8 - 18% | 57/ | |
| LC - PE | 4 | 27 | 14.8 | 4.9 - 32% | Present study | |
| GRA - PE | 15 | 84 | 17.85 | 10 - 28% |
| |
| SAL - PE | 1 | 43 | 2.32 | 0.12 - 11% | Present study | |
| BON - PE | 8 | 64 | 12.5 | 6 - 22% |
| |
| BUI - PE | 1 | 27 | 3.7 | 0.18 – 16% | Present study | |
| SUR - PE | 11 | 147 | 7,48 | 4 - 13% |
| |
| BEZ - PE | 15 | 2 | 142 | 11.97 | 7.4 - 18% | 88/ |
| TOR - PE | 6 | 66 | 9.1 | 3.8 - 18% |
| |
| ST - PE | 9 | 144 | 6.25 | 3.1 - 11% | 12/ | |
| OUR - PE | 1 | 1 | 46 | 4.35 | 0.7 - 14% | Present study |
| ARA - SE | 0 | 10 | − | 0 - 26% | Present study | |
| MAC - AL | 2 | 63 | 3.17 | 0.5 - 10% | Present study | |
| JP - PB | 0 | 35 | − | 0 - 8.2% | Present study | |
| JN - CE | 3 | 61 | 4.92 | 1.3 - 13% | Present study | |
| PIC - PI | 2 | 46 | 4.35 | 0.7 - 14% | Present study | |
| SOB - BA | 2 | 30 | 6.7 | 1.1 - 20% |
| |
| RC - BA | 2 | 13 | 15.4 | 2.7 - 42% |
| |
| ITAB - BA | 3 | 16 | 18.8 | 5 - 43% |
| |
| Total | 107 | 5 | 1274 |
Statistical significance by Fisher's exact test between populations of Rhammatocerus brasiliensis analyzed for the presence of B chromosomes. Values of p < 0.05 are in boldface.
| Locality | ITA | GOI | VIT | LC | GRA | SAL | BON | BUI | SUR | BEZ | TOR | ST | OUR | ARA | MAC | JP | JN | PIC | SOB | RC | ITAB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ITA-PE | − | 0.961 | 0.739 | 0.633 | 0.625 | 0.077 | 0.999 | 0.287 | 0.220 | 0.871 | 0.562 | 0.119 | 0.173 | 0.510 | 0.057 | 0.032 | 0.152 | 0.173 | 0.517 | 0.999 | 0.851 |
| GOI-PE | − | 0.999 | 0.965 | 0.523 | 0.258 | 0.999 | 0.559 | 0.673 | 0.999 | 0.993 | 0.494 | 0.458 | 0.721 | 0.251 | 0.121 | 0.457 | 0.458 | 0.855 | 0.999 | 0.733 | |
| VIT-PE | − | 0.908 | 0.252 | 0.154 | 0.936 | 0.462 | 0.480 | 0.962 | 0.921 | 0.285 | 0.326 | 0.671 | 0.128 | 0.065 | 0.306 | 0.326 | 0.778 | 0.908 | 0.586 | ||
| LC-PE | − | 0.315 | 0.658 | 0.762 | 0.350 | 0.999 | 0.765 | 0.999 | 0.999 | 0.947 | 0.999 | 0.694 | 0.371 | 0.977 | 0.947 | 0.999 | 0.783 | 0.519 | |||
| GRA-PE | − |
| 0.511 | 0.113 |
| 0.303 | 0.191 |
|
| 0.318 |
|
| 0.031 | 0.045 | 0.231 | 0.999 | 0.999 | ||||
| SAL-PE | − | 0.121 | 0.999 | 0.396 | 0.093 | 0.314 | 0.569 | 0.999 | 0.999 | 0.999 | 0.999 | 0.900 | 0.999 | 0.732 | 0.262 | 0.113 | |||||
| BON-PE | − | 0.375 | 0.360 | 0.999 | 0.731 | 0.217 | 0.255 | 0.587 | 0.100 | 0.051 | 0.236 | 0.255 | 0.642 | 0.999 | 0.764 | ||||||
| BUI-PE | − | 0.831 | 0.353 | 0.682 | 0.999 | 0.999 | 0.999 | 0.999 | 0.871 | 0.999 | 0.999 | 0.999 | 0.484 | 0.274 | |||||||
| SUR-PE | − | 0.275 | 0.876 | 0.855 | 0.722 | 0.945 | 0.387 | 0.177 | 0.739 | 0.722 | 0.999 | 0.570 | 0.287 | ||||||||
| BEZ-PE | − | 0.720 | 0.138 | 0.217 | 0.587 | 0.067 |
| 0.188 | 0.217 | 0.633 | 0.985 | 0.656 | |||||||||
| TOR-PE | − | 0.633 | 0.570 | 0.831 | 0.304 | 0.143 | 0.573 | 0.570 | 0.999 | 0.783 | 0.482 | ||||||||||
| ST-PE | − | 0.952 | 0.999 | 0.590 | 0.268 | 0.995 | 0.952 | 0.999 | 0.454 | 0.206 | |||||||||||
| OUR-PE | − | 0.999 | 0.999 | 0.638 | 0.999 | 0.999 | 0.999 | 0.415 | 0.206 | ||||||||||||
| ARA-SE | − | 0.999 |
| 0.999 | 0.999 | 0.999 | 0.616 | 0.430 | |||||||||||||
| MAC-AL | − | 0.821 | 0.969 | 0.999 | 0.775 | 0.266 | 0.107 | ||||||||||||||
| JP-PB | − | 0.503 | 0.638 | 0.418 | 0.138 | 0.053 | |||||||||||||||
| JN-CE | − | 0.999 | 0.999 | 0.419 | 0.200 | ||||||||||||||||
| PIC-PI | − | 0.999 | 0.415 | 0.206 | |||||||||||||||||
| SOB-BA | − | 0.700 | 0.441 | ||||||||||||||||||
| RC-BA | − | 0.999 | |||||||||||||||||||
| ITAB-BA | − |
Genetic diversity (GD) and mean heterozygosity (HE) estimated for the analyzed populations of Rhammatocerus brasiliensis.
| Locality | HE | DG |
|---|---|---|
| ARA – SE | 0.312 | 13.6 |
| MAC – AL | 0.285 | 68.4 |
| JP – PB | 0.320 | 83.1 |
| ITA - PE | 0.297 | 74.7 |
| VIT – PE | 0.329 | 50.5 |
| BUI – PE | 0.324 | 87.3 |
| ST – PE | 0.291 | 81.0 |
| OUR - PE | 0.363 | 90.5 |
| JN – CE | 0.290 | 82.1 |
| PIC – PI | 0.298 | 78.9 |
| 0.311 | 71.0 |
Parameters estimated by the software Hickory for the model f = 0.
| Parameter | Mean | S.D. | 2.5% | 97.5% |
|---|---|---|---|---|
| Theta-I | 0.223 | 0.016 | 0.193 | 0.258 |
| Theta-II | 0.104 | 0.006 | 0.092 | 0.117 |
| Theta-III | 0.087 | 0.003 | 0.080 | 0.094 |
| Theta-Y | 0.132 | 0.018 | 0.101 | 0.172 |
| Rho | 0.591 | 0.041 | 0.512 | 0.673 |
| Hs [ARA] | 0.257 | 0.005 | 0.245 | 0.268 |
| Hs [MAC] | 0.257 | 0.005 | 0.246 | 0.268 |
| Hs [JP] | 0.270 | 0.005 | 0.259 | 0.281 |
| Hs [ITA] | 0.259 | 0.005 | 0.247 | 0.270 |
| Hs [VIT] | 0.293 | 0.005 | 0.282 | 0.304 |
| Hs [BUI] | 0.262 | 0.006 | 0.250 | 0.273 |
| Hs [ST] | 0.279 | 0.005 | 0.268 | 0.291 |
| Hs [OUR] | 0.290 | 0.005 | 0.279 | 0.301 |
| Hs [JN] | 0.279 | 0.005 | 0.269 | 0.290 |
| Hs [PIC] | 0.259 | 0.005 | 0.248 | 0.269 |
| Hs | 0.270 | 0.002 | 0.267 | 0.274 |
| HT | 0.298 | 0.002 | 0.294 | 0.302 |
| GSTB | 0.092 | 0.004 | 0.084 | 0.100 |
Mantel test based on pairwise F in 10 analyzed populations of R. brasiliensis.
| Locality | ARA - SE | MAC - AL | JP - PB | ITA - PE | VIT - PE | BUI - PE | ST - PE | OUR - PE | PIC - PI | JN - CE |
|---|---|---|---|---|---|---|---|---|---|---|
| ARA - SE | − | 208 km | 488 km | 437 km | 374 km | 260 km | 360 km | 475 km | 488 km | 652 km |
| MAC - AL | 0.113 | − | 292 km | 217 km | 165 km | 196 km | 342 km | 523 km | 480 km | 695 km |
| JP - PB | 0.074 | 0.112 | − | 070 km | 112 km | 300 km | 388 km | 600 km | 497 km | 726 km |
| ITA - PE | 0.184 | 0.183 | 0.129 | − | 057 km | 269 km | 381 km | 589 km | 499 km | 729 km |
| VIT - PE | 0.145 | 0.128 | 0.123 | 0.183 | − | 216 km | 334 km | 533 km | 458 km | 694 km |
| BUI - PE | 0.166 | 0.161 | 0.077 | 0.113 | 0.203 | − | 142 km | 326 km | 284 km | 500 km |
| ST - PE | 0.156 | 0.147 | 0.171 | 0.240 | 0.124 | 0.226 | − | 197 km | 138 km | 363 km |
| OUR - PE | 0.154 | 0.165 | 0.119 | 0.154 | 0.113 | 0.146 | 0.159 | − | 124 km | 163 km |
| JN - CE | 0.179 | 0.229 | 0.139 | 0.130 | 0.182 | 0.162 | 0.224 | 0.162 | − | 232 km |
| PIC -PI | 0.128 | 0.178 | 0.098 | 0.127 | 0.134 | 0.164 | 0.191 | 0.116 | 0.098 | − |
Figure 3Delta K values according to the method of Evanno . Note the highest peak of K = 2.
Figure 4Ancestry of Rhammatocerus brasiliensis specimens traced by the software Structure version 2.3.1, using seven ISSR primers and 95 polymorphic bands. Each vertical bar corresponds to one of the 200 analyzed individuals and its population of origin. Bar length is proportional to parentage values inferred in each group for each individual.