Literature DB >> 32540962

Comprehensive Analysis of Radiomic Datasets by RadAR.

Matteo Benelli1, Andrea Barucci2, Nicola Zoppetti2, Silvia Calusi3, Laura Redapi3, Giuseppe Della Gala3, Stefano Piffer3, Luca Bernardi4, Franco Fusi3, Stefania Pallotta3,5.   

Abstract

Quantitative analysis of biomedical images, referred to as radiomics, is emerging as a promising approach to facilitate clinical decisions and improve patient stratification. The typical radiomic workflow includes image acquisition, segmentation, feature extraction, and analysis of high-dimensional datasets. While procedures for primary radiomic analyses have been established in recent years, processing the resulting radiomic datasets remains a challenge due to the lack of specific tools for doing so. Here we present RadAR (Radiomics Analysis with R), a new software to perform comprehensive analysis of radiomic features. RadAR allows users to process radiomic datasets in their entirety, from data import to feature processing and visualization, and implements multiple statistical methods for analysis of these data. We used RadAR to analyze the radiomic profiles of more than 850 patients with cancer from publicly available datasets and showed that it was able to recapitulate expected results. These results demonstrate RadAR as a reliable and valuable tool for the radiomics community. SIGNIFICANCE: A new computational tool performs comprehensive analysis of high-dimensional radiomic datasets, recapitulating expected results in the analysis of radiomic profiles of >850 patients with cancer from independent datasets. ©2020 American Association for Cancer Research.

Entities:  

Year:  2020        PMID: 32540962     DOI: 10.1158/0008-5472.CAN-20-0332

Source DB:  PubMed          Journal:  Cancer Res        ISSN: 0008-5472            Impact factor:   12.701


  4 in total

1.  Coupling radiomics analysis of CT image with diversification of tumor ecosystem: A new insight to overall survival in stage I-III colorectal cancer.

Authors:  Yanqi Huang; Lan He; Zhenhui Li; Xin Chen; Chu Han; Ke Zhao; Yuan Zhang; Jinrong Qu; Yun Mao; Changhong Liang; Zaiyi Liu
Journal:  Chin J Cancer Res       Date:  2022-02-28       Impact factor: 5.087

2.  The incremental value of computed tomography of COVID-19 pneumonia in predicting ICU admission.

Authors:  Maurizio Bartolucci; Matteo Benelli; Margherita Betti; Sara Bicchi; Luca Fedeli; Federico Giannelli; Donatella Aquilini; Alessio Baldini; Guglielmo Consales; Massimo Edoardo Di Natale; Pamela Lotti; Letizia Vannucchi; Michele Trezzi; Lorenzo Nicola Mazzoni; Sandro Santini; Roberto Carpi; Daniela Matarrese; Luca Bernardi; Mario Mascalchi
Journal:  Sci Rep       Date:  2021-08-02       Impact factor: 4.379

Review 3.  Application of radiomics and machine learning in head and neck cancers.

Authors:  Zhouying Peng; Yumin Wang; Yaxuan Wang; Sijie Jiang; Ruohao Fan; Hua Zhang; Weihong Jiang
Journal:  Int J Biol Sci       Date:  2021-01-01       Impact factor: 6.580

Review 4.  Radiomics, deep learning and early diagnosis in oncology.

Authors:  Peng Wei
Journal:  Emerg Top Life Sci       Date:  2021-12-21
  4 in total

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