Literature DB >> 32534852

Equine Genotyping Arrays.

Robert J Schaefer1, Molly E McCue2.   

Abstract

High-quality genomic tools have been integral in understanding genomic architecture and function in the modern-day horse. The equine genetics community has a long tradition of pooling resources to develop genomic tools. Since the equine genome was sequenced in 2006, several iterations of high throughput genotyping arrays have been developed and released, enabling rapid and cost-effective genotyping. This review highlights the design considerations of each iteration, focusing on data available during development and outlining considerations in selecting the genetic variants included on each array. Additionally, we outline recent applications of equine genotyping arrays as well as future prospects and applications.
Copyright © 2020 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Equine; GWAS; Genotyping array; Imputation; Population genomics; SNP

Mesh:

Year:  2020        PMID: 32534852     DOI: 10.1016/j.cveq.2020.03.001

Source DB:  PubMed          Journal:  Vet Clin North Am Equine Pract        ISSN: 0749-0739            Impact factor:   1.792


  2 in total

Review 1.  The Genetic Basis of Obesity and Related Metabolic Diseases in Humans and Companion Animals.

Authors:  Natalie Wallis; Eleanor Raffan
Journal:  Genes (Basel)       Date:  2020-11-20       Impact factor: 4.096

2.  Development and validation of a horse reference panel for genotype imputation.

Authors:  Paula Reich; Clemens Falker-Gieske; Torsten Pook; Jens Tetens
Journal:  Genet Sel Evol       Date:  2022-07-04       Impact factor: 5.100

  2 in total

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