Literature DB >> 32533923

Acetylation of Cytidine Residues Boosts HIV-1 Gene Expression by Increasing Viral RNA Stability.

Kevin Tsai1, Ananda Ayyappan Jaguva Vasudevan1, Cecilia Martinez Campos1, Ann Emery2, Ronald Swanstrom3, Bryan R Cullen4.   

Abstract

Epitranscriptomic RNA modifications, including methylation of adenine and pan class="Chemical">cytidine residues, are now recognized as key regulators of both cellular and viral mRNA function. Moreover, acetylation of the N4 position of cytidine (ac4C) was recently reported to increase the translation and stability of cellular mRNAs. Here, we show that ac4C and N-acetyltransferase 10 (NAT10), the enzyme that adds ac4C to RNAs, have been subverted by human immunodeficiency virus 1 (HIV-1) to increase viral gene expression. HIV-1 transcripts are modified with ac4C at multiple discrete sites, and silent mutagenesis of these ac4C sites led to decreased HIV-1 gene expression. Similarly, loss of ac4C from viral transcripts due to depletion of NAT10 inhibited HIV-1 replication by reducing viral RNA stability. Interestingly, the NAT10 inhibitor remodelin could inhibit HIV-1 replication at concentrations that have no effect on cell viability, thus identifying ac4C addition as a potential target for antiviral drug development.
Copyright © 2020 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  HIV-1; N-acetyltransferase 10; N4-acetylcytidine; NAT10; RNA modification; ac4C; epitranscriptomic; gene regulation; human immunodeficiency virus 1; retrovirus; virus

Mesh:

Substances:

Year:  2020        PMID: 32533923      PMCID: PMC7429276          DOI: 10.1016/j.chom.2020.05.011

Source DB:  PubMed          Journal:  Cell Host Microbe        ISSN: 1931-3128            Impact factor:   21.023


  41 in total

1.  Production of acquired immunodeficiency syndrome-associated retrovirus in human and nonhuman cells transfected with an infectious molecular clone.

Authors:  A Adachi; H E Gendelman; S Koenig; T Folks; R Willey; A Rabson; M A Martin
Journal:  J Virol       Date:  1986-08       Impact factor: 5.103

2.  Epitranscriptomic Enhancement of Influenza A Virus Gene Expression and Replication.

Authors:  David G Courtney; Edward M Kennedy; Rebekah E Dumm; Hal P Bogerd; Kevin Tsai; Nicholas S Heaton; Bryan R Cullen
Journal:  Cell Host Microbe       Date:  2017-09-13       Impact factor: 21.023

3.  Murine CXCR-4 is a functional coreceptor for T-cell-tropic and dual-tropic strains of human immunodeficiency virus type 1.

Authors:  P D Bieniasz; R A Fridell; K Anthony; B R Cullen
Journal:  J Virol       Date:  1997-09       Impact factor: 5.103

4.  Ultrafast and memory-efficient alignment of short DNA sequences to the human genome.

Authors:  Ben Langmead; Cole Trapnell; Mihai Pop; Steven L Salzberg
Journal:  Genome Biol       Date:  2009-03-04       Impact factor: 13.583

5.  Integrative genomics viewer.

Authors:  James T Robinson; Helga Thorvaldsdóttir; Wendy Winckler; Mitchell Guttman; Eric S Lander; Gad Getz; Jill P Mesirov
Journal:  Nat Biotechnol       Date:  2011-01       Impact factor: 54.908

6.  N6-methyladenosine modification and the YTHDF2 reader protein play cell type specific roles in lytic viral gene expression during Kaposi's sarcoma-associated herpesvirus infection.

Authors:  Charles R Hesser; John Karijolich; Dan Dominissini; Chuan He; Britt A Glaunsinger
Journal:  PLoS Pathog       Date:  2018-04-16       Impact factor: 6.823

7.  Viral N6-methyladenosine upregulates replication and pathogenesis of human respiratory syncytial virus.

Authors:  Miaoge Xue; Boxuan Simen Zhao; Zijie Zhang; Mijia Lu; Olivia Harder; Phylip Chen; Zhike Lu; Anzhong Li; Yuanmei Ma; Yunsheng Xu; Xueya Liang; Jiyong Zhou; Stefan Niewiesk; Mark E Peeples; Chuan He; Jianrong Li
Journal:  Nat Commun       Date:  2019-10-09       Impact factor: 14.919

8.  MetaPlotR: a Perl/R pipeline for plotting metagenes of nucleotide modifications and other transcriptomic sites.

Authors:  Anthony O Olarerin-George; Samie R Jaffrey
Journal:  Bioinformatics       Date:  2017-05-15       Impact factor: 6.937

9.  Model-based analysis of ChIP-Seq (MACS).

Authors:  Yong Zhang; Tao Liu; Clifford A Meyer; Jérôme Eeckhoute; David S Johnson; Bradley E Bernstein; Chad Nusbaum; Richard M Myers; Myles Brown; Wei Li; X Shirley Liu
Journal:  Genome Biol       Date:  2008-09-17       Impact factor: 13.583

10.  N6-methyladenosine modification and METTL3 modulate enterovirus 71 replication.

Authors:  Haojie Hao; Sujuan Hao; Honghe Chen; Zhen Chen; Yanfang Zhang; Jun Wang; Hanzhong Wang; Bo Zhang; Jianming Qiu; Fei Deng; Wuxiang Guan
Journal:  Nucleic Acids Res       Date:  2019-01-10       Impact factor: 16.971

View more
  26 in total

1.  Mapping of pseudouridine residues on cellular and viral transcripts using a novel antibody-based technique.

Authors:  Cecilia Martinez Campos; Kevin Tsai; David G Courtney; Hal P Bogerd; Christopher L Holley; Bryan R Cullen
Journal:  RNA       Date:  2021-08-10       Impact factor: 4.942

Review 2.  How RNA modifications regulate the antiviral response.

Authors:  Matthew G Thompson; Matthew T Sacco; Stacy M Horner
Journal:  Immunol Rev       Date:  2021-08-17       Impact factor: 12.988

3.  Direct epitranscriptomic regulation of mammalian translation initiation through N4-acetylcytidine.

Authors:  Daniel Arango; David Sturgill; Renbin Yang; Tapan Kanai; Paulina Bauer; Jyoti Roy; Ziqiu Wang; Masaki Hosogane; Sarah Schiffers; Shalini Oberdoerffer
Journal:  Mol Cell       Date:  2022-06-08       Impact factor: 19.328

4.  NAT10 regulates mitotic cell fate by acetylating Eg5 to control bipolar spindle assembly and chromosome segregation.

Authors:  Jiaojiao Zheng; Yuqin Tan; Xiaofeng Liu; Chunfeng Zhang; Kunqi Su; Yang Jiang; Jianyuan Luo; Li Li; Xiaojuan Du
Journal:  Cell Death Differ       Date:  2022-02-24       Impact factor: 12.067

5.  Identification and mapping of post-transcriptional modifications on the HIV-1 antisense transcript Ast in human cells.

Authors:  Mariana Estevez; Rui Li; Biplab Paul; Kaveh Daneshvar; Alan C Mullen; Fabio Romerio; Balasubrahmanyam Addepalli
Journal:  RNA       Date:  2022-02-15       Impact factor: 5.636

Review 6.  Emerging role of N4-acetylcytidine modification of RNA in gene regulation and cellular functions.

Authors:  R Karthiya; S Mohammed Wasil; Piyush Khandelia
Journal:  Mol Biol Rep       Date:  2020-11-10       Impact factor: 2.316

7.  Mapping RNA Modifications Using Photo-Crosslinking-Assisted Modification Sequencing.

Authors:  Bryan R Cullen; Kevin Tsai
Journal:  Methods Mol Biol       Date:  2021

8.  Quantitative nucleotide resolution profiling of RNA cytidine acetylation by ac4C-seq.

Authors:  Supuni Thalalla Gamage; Aldema Sas-Chen; Schraga Schwartz; Jordan L Meier
Journal:  Nat Protoc       Date:  2021-03-26       Impact factor: 17.021

9.  Structural insights of human N-acetyltransferase 10 and identification of its potential novel inhibitors.

Authors:  Mahmood Hassan Dalhat; Hisham N Altayb; Mohammad Imran Khan; Hani Choudhry
Journal:  Sci Rep       Date:  2021-03-15       Impact factor: 4.379

10.  Prognostic and Immunological Role of mRNA ac4C Regulator NAT10 in Pan-Cancer: New Territory for Cancer Research?

Authors:  Chuanxi Yang; Tingting Wu; Jing Zhang; Jinhui Liu; Kun Zhao; Wei Sun; Xin Zhou; Xiangqing Kong; Jing Shi
Journal:  Front Oncol       Date:  2021-05-19       Impact factor: 6.244

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.