Literature DB >> 32528218

Conditional generative adversarial network for synthesizing hyperspectral images of breast cancer cells from digitized histology.

Martin Halicek1,2, Samuel Ortega1,3, Himar Fabelo3, Carlos Lopez4,5, Marylene Lejaune4,5, Gustavo M Callico3, Baowei Fei1,6,7.   

Abstract

Hyperspectral imaging (HSI), which acquires up to hundreds of bands, has been proposed as a promising imaging modality for digitized histology beyond RGB imaging to provide more quantitative information to assist pathologists with disease detection in samples. While digitized RGB histology is quite standardized and easy to acquire, histological HSI often requires custom-made equipment and longer imaging times compared to RGB. In this work, we present a dataset of corresponding RGB digitized histology and histological HSI of breast cancer, and we develop a conditional generative adversarial network (GAN) to artificially synthesize HSI from standard RGB images of normal and cancer cells. The results of the GAN synthesized HSI are promising, showing structural similarity (SSIM) of approximately 80% and mean absolute error (MAE) of 6 to 11%. Further work is needed to establish the ability of generating HSI from RGB images on larger datasets.

Entities:  

Year:  2020        PMID: 32528218      PMCID: PMC7289182          DOI: 10.1117/12.2549994

Source DB:  PubMed          Journal:  Proc SPIE Int Soc Opt Eng        ISSN: 0277-786X


  2 in total

1.  Image quality assessment: from error visibility to structural similarity.

Authors:  Zhou Wang; Alan Conrad Bovik; Hamid Rahim Sheikh; Eero P Simoncelli
Journal:  IEEE Trans Image Process       Date:  2004-04       Impact factor: 10.856

Review 2.  In-Vivo and Ex-Vivo Tissue Analysis through Hyperspectral Imaging Techniques: Revealing the Invisible Features of Cancer.

Authors:  Martin Halicek; Himar Fabelo; Samuel Ortega; Gustavo M Callico; Baowei Fei
Journal:  Cancers (Basel)       Date:  2019-05-30       Impact factor: 6.639

  2 in total
  4 in total

1.  Unsupervised super-resolution reconstruction of hyperspectral histology images for whole-slide imaging.

Authors:  Ling Ma; Armand Rathgeb; Hasan Mubarak; Minh Tran; Baowei Fei
Journal:  J Biomed Opt       Date:  2022-05       Impact factor: 3.758

Review 2.  Deep Learning in Mining Biological Data.

Authors:  Mufti Mahmud; M Shamim Kaiser; T Martin McGinnity; Amir Hussain
Journal:  Cognit Comput       Date:  2021-01-05       Impact factor: 5.418

Review 3.  A Comprehensive Survey on Deep-Learning-Based Breast Cancer Diagnosis.

Authors:  Muhammad Firoz Mridha; Md Abdul Hamid; Muhammad Mostafa Monowar; Ashfia Jannat Keya; Abu Quwsar Ohi; Md Rashedul Islam; Jong-Myon Kim
Journal:  Cancers (Basel)       Date:  2021-12-04       Impact factor: 6.639

4.  Synthesis of Microscopic Cell Images Obtained from Bone Marrow Aspirate Smears through Generative Adversarial Networks.

Authors:  Debapriya Hazra; Yung-Cheol Byun; Woo Jin Kim; Chul-Ung Kang
Journal:  Biology (Basel)       Date:  2022-02-10
  4 in total

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