| Literature DB >> 32520210 |
Isabela Pereira de Oliveira Souza1, Marlene Salete Uberti2, Wagner de Souza Tassinari1,3.
Abstract
Leptospirosis is a reemerging zoonosis caused by bacteria of the genus Leptospira sp. with global importance in the medical and veterinary fields, being responsible for about 59 thousand deaths each year in the world. The use of Geographic Information Systems (GIS) in the health sector is propitious and has been adopted by human and animal health professionals as an important tool in spatial analyses of health. The objective of this study was to conduct a systematic review on the geoprocessing and spatial analysis techniques adopted for mapping risk areas of human and animal leptospirosis. The articles were collected on scientific platforms by entering the following terms: SIG/GIS, leptospirose/leptospirosis, area de risco/risk area and distribuicao espacial/spatial distribution, and included in the study if they met the following criteria: a) publication in the period from 1998 to 2017; b) identification of risk areas and/or spatial distribution of leptospirosis as one of the research topics; and c) application of GIS in the methodology. As a result, we found 40 articles, published by 15 different countries, which adopted GIS for the spatial analysis and identification of risk areas of leptospirosis. Among these, only 45% (18) conducted an spatial statistical analysis. Brazil and USA had the highest numbers of publications, 16 and 7 articles, respectively. From 2007, the use of GIS and spatial analysis techniques, applied to the theme of this study, have been intensified and diversified, and 93% of the articles elected for this review were published from 2007 to 2017. The results point to a progressive interest of health professionals in applying these techniques for monitoring and conducting epidemiological analyses of leptospirosis, besides indicating a greater need for intersectoral integration between health professionals and others, in the use of spatial analysis and GIS techniques.Entities:
Mesh:
Year: 2020 PMID: 32520210 PMCID: PMC7274766 DOI: 10.1590/S1678-9946202062035
Source DB: PubMed Journal: Rev Inst Med Trop Sao Paulo ISSN: 0036-4665 Impact factor: 1.846
Figure 1Flowchart of the procedure for including articles in the study.
Temporal distribution of the softwares used in studies on risk areas of leptospirosis in the last 20 years worldwide.
| Years of the publications | |||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Software | 1998 | 1999 | 2000 | 2001 | 2002 | 2003 | 2004 | 2005 | 2006 | 2007 | 2008 | 2009 | 2010 | 2011 | 2012 | 2013 | 2014 | 2015 | 2016 | 2017 | TOTAL |
| ArcGIS | 2 | 2 | 1 | 3 | 1 | 4 | 3 | 4 | 1 | 21 | |||||||||||
| ArcMap | 1 | 4 | 1 | 6 | |||||||||||||||||
| ArcView | 1 | 2 | 1 | 4 | |||||||||||||||||
| QGIS | 1 | 1 | |||||||||||||||||||
| MapInfo | 1 | 1 | 1 | 3 | |||||||||||||||||
| TerraView | 1 | 1 | 1 | 1 | 4 | ||||||||||||||||
| ArcSDE | 1 | 1 | |||||||||||||||||||
| Kosmo | 1 | 1 | |||||||||||||||||||
|
| |||||||||||||||||||||
| Total | 0 | 0 | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 2 | 3 | 0 | 2 | 2 | 9 | 2 | 6 | 6 | 5 | 1 | 41 |
Figure 2Map of the global distribution in number of articles published by countries from 1998 to 2017.
Ranking of countries of origin of the scientific articles elected for this study.
| Ranking | Country | Number of articles published (1998-2017) | Year(s) of publication |
|---|---|---|---|
| 1st | Brazil | 16 Articles | 2000, 2001, 2004, 2008, 2010, 2011, 2012, 2014, 2015, 2016, 2017. |
| 2nd | Usa | 7 Articles | 2007, 2008, 2011, 2012 and 2013. |
| 3rd | Canada | 2 Articles | 2013 and 2014. |
| 3rd | American Samoa | 2 Articles | 2012 |
| 3rd | Thailand | 2 Articles | 2008 and 2015. |
| 4th | Kenya | 1 Articles | 2017 |
| 4th | China | 1 Article | 2016 |
| 4th | Fiji | 1 Article | 2016 |
| 4th | Iran | 1 Article | 2015 |
| 4th | Mexico | 1 Article | 2015 |
| 4th | Nicaragua | 1 Article | 2012 |
| 4th | Trinidad And Tobago | 1 Article | 2014 |
| 4th | Usa (Hawai) | 1 Article | 2007 |
| 4th | Australia | 1 Article | 2015 |
| 4th | Taiwan | 1 Article | 2012 |
| 4th | Colombia | 1 Article | 2015 |
List of the elected articles with their respective descriptions regarding the year of publication, authors, country of origin, title, scientific journal, software and method of analysis in the 2007-2017 period
| Year of Publication | Authors | Country | Title | Scientific Journal | Software | Method of Analysis |
|---|---|---|---|---|---|---|
| 2000 | Barcellos and Sabroza33 | Brazil | Socio-environmental determinants of the leptospirosis outbreak of 1996 in western Rio de Janeiro: a geographical approach. | International Journal of Environmental Health Research. | MapInfo and SPSS | Statistical analysis to verify the correlation and significance by using the Pearson’s coefficient and ANOVA, respectively. Spatial operations of variables distribution were performed with thematic maps entered in MapInfo. |
| 2001 | Barcellos and Sabroza17 | Brazil | The place behind the case: leptospirosis risks and associated environmental conditions in a flood-related outbreak in Rio de Janeiro. | Cadernos de Saude Publica. | MapInfo. | Significance analysis using Poisson and map of risk. |
| 2004 | Tassinari et al.38 | Brazil | Distribuição espacial da leptospirose no Município do Rio de Janeiro, Brasil, ao longo dos anos de 1996-1999. | Cadernos de Saude Publica. | TerraView, “R”. | Kernel ratio. |
| 2007 | Littnan et al.39 | USA (Hawai) | Survey for selected pathogens and evaluation of disease risk factors for endangered Hawaian Monk Seals in the main Hawaian Islands. | EcoHealth. | ArcGIS. | Kernel density |
| 2007 | Ghneim et al.14 | USA | Use of a case-control study and geographic information systems to determine environmental and demographic risk factors for canine leptospirosis. | EDP Sciences, Veterinary Research. | EGRET, ArcGIS and JMP. | Bivariate and multivariate logistic regression models. |
| 2008 | Reis et al.5 | Brazil | Impact of environment and social gradient on Leptospira infection in urban slums. | PLOS Neglected Tropical Diseases. | ArcView, EpiInfo, “R”. | Chi-square correlation and Wilcoxon tests. Kernel density analysis and Spearman’s correlation coefficient. |
| 2008 | Norman et al.40 | USA | Risk factors for an outbreak of leptospirosis in California sea lions (Zalophus californianus) in California, 2004. | Journal of Wildlife Diseases. | ArcGIS, STATA. | Regression model and thematic maps. |
| 2008 | Lerdthusnee et al.41 | Thailand | Surveys of rodent-borne disease in Thailand with a focus on scrub typhus assessment. | Integrative Zoology. | ArcGIS. | Kernel density. |
| 2010 | Soares et al.6 | Brazil | Spatial and seasonal analysis of leptospirosis in the city of São Paulo, SP, 1998 to 2006 | Revista de Saude Publica. | ArcGIS, MapInfo | Global and local Moran indices and the Spearman’s correlation coefficient. |
| 2011 | Raghavan et al.15 | USA | Evaluations of land cover risk factors for canine leptospirosis: 94 cases (2002-2009). | Preventive Veterinary Medicine. | ArcMap, Google Earth, “R” | Logistic regression model and distribution map. |
| 2011 | Melo et al.42 | Brazil | Espacialização da leptospirose em Aracaju, Estado de Sergipe, no período de 2001 a 2007. | Revista da Sociedade Brasileira de Medicina Tropical. | TerraView. | Kernel density. |
| 2012 | Bier et al.43 | Brazil | Spatial distribution of seropositive dogs to Leptospira spp. and evaluation of leptospirosis risk factors using a decision tree. | Acta Scientiae Veterinariae. | ArcView. | Matrix and decision tree. |
| 2012 | Raghavan et al.44 | USA | Evaluations of hydrologic risk factors for canine leptospirosis: 94 cases (2002-2009). | Preventive Veterinary Medicine. | ArcGis | Logistic regression model and map of distribution of cases. |
| 2012 | Roug et al.45 | USA | Serosurveillance for livestock pathogens in free-ranging mule deer (Odocoileus hemionus). | PLOS One. | STATA and ArcMap | Logistic regression model and thematic map. |
| 2012 | Raghavan et al.31 | USA | Neighborhood -level socioeconomic and urban land use risk factors of canine leptospirosis: 94 cases (2002-2009). | Preventive Veterinary Medicine. | ArcMap, TIGER, SAS and “R”. | Logistic regression model and spatial autocorrelation by geoR. |
| 2012 | Lau et al.43 | Samoa | Leptospirosis in American Samoa - estimating and mapping risk using environmental data. | PLOS Neglected Tropical Diseases. | ArcMap, SaTScan, STATA, “R”. | Logistic regression model. Kulldorff’s scan statistic and SaTScan were used to identify clusters. Construction of thematic map. |
| 2012 | Lau et al.46 | Samoa | Emergence of new leptospiral serovars American Samoa - ascertainment or ecological change? | BMC Infectious Diseases. | ArcMap, STATA. | Logistic regression model and thematic map. |
| 2012 | Fonzar and Langoni47 | Brazil | Geographic analysis on the occurrence of human and canine leptospirosis in the city of Maringá, state of Paraná, Brazil. | Revista da Sociedade Brasileira de Medicina Tropical. | ArcView. | Risk areas were determined by the construction of thematic maps. |
| 2012 | Schneider et al.48 | Nicaragua | Leptospirosis outbreak in Nicaragua: identifying critical areas and exploring drivers for evidence-based planning. | International Journal of Environmental Research and Public Health. | ArcGIS, SAS. | Logistic regression model and thematic map. |
| 2012 | Chen et al.49 | Taiwan | Effects of extreme precipitation to the distribution of infectious diseases in Taiwan, 1994-2008. | PLOS One | ArcGIS. | Geospatial Kriging method. |
| 2013 | Raghavan et al.50 | USA | Spatial scale effects in environmental risk-factor modelling for diseases. | Geospatial Health. | ArcSDE , ArcMap, “R”. | Construction of buffers by NLCD |
| 2013 | Himsworth et al.13 | Canada | Ecology of Leptospira interrogans in Norway rats (Rattus novergicus) in an Inner-city neighborhood of Vancouver, Canada. | PLOS Neglected Tropical Diseases. | “R”, ArcGIS and SaTScan. | Logistic regression model. Identification of clusters by SaTScan. |
| 2014 | Himsworth et al.51 | Canada | The characteristics of wild rat (Rattus spp.) populations from an Inner-city neighborhood with a focus on factors critical to the understanding of rat-associated zoonoses. | PLOS One. | ArcGIS and “R”. | Logistic regression model and map of distribution. |
| 2014 | Felzemburgh et al.52 | Brazil | Prospective study of leptospirosis transmission in an urban slum community: role of poor environment in repeated exposures to the Leptospira agent. | PLOS Neglected Tropical Diseases. | ArcView | Logistic regression model and thematic map. |
| 2014 | Oliveira Filho et al.53 | Brazil | Spatial characterization of Leptospira spp. Infection in equids from the Brejo Paraibano micro-region in Brazil. | Geospatial Health | TerraView | Spatial statistical analysis with application of Kernel density. |
| 2014 | Gracie et al.54 | Brazil | Geographical scale effects on the analysis of leptospirosis determinants. | International Journal of Environmental Research and Public Health. | ArcGIS, SPSS and ArcInfo. | Moran’s index to test autocorrelation between data. |
| 2014 | Costa et al.55 | Brazil | Influence of household rat infestation on Leptospira transmission in the urban slum environment. | PLOS Neglected Tropical Diseases. | ArcGIS and Epi-Info. | Logistic regression model and spatial analysis by ArcGIS. |
| 2014 | Vega-Corredor and Opadeyi56 | Trinidad and Tobago | Hydrology and public health: linking human leptospirosis and local hydrological dynamics in Trinidad, West Indies. | Earth Perspectives. | ArcGIS. | Kernel density. |
| 2015 | Suwanpakdee et al.32 | Thailand | Spatio-temporal patterns of leptospirosis in Thailand: is flooding a risk factor? | Epidemiology & Infection. | ArcGIS and Stata. | Logistic regression model and spatial analysis using ArcGIS. |
| 2015 | Lau et al.57 | Australia | The emergency of Leptospirosa borgpetersenii serovar Arborea in Queensland, Australia, 2001 to 2013. | BMC Infectious Diseases. | ArcMap and Stata. | Logistic regression model and map of incidence of cases. |
| 2015 | Dutra et al.58 | Brazil | A influência da variabilidade da precipitação no padrão de distribuição dos casos de leptospirose em Minas Gerais, no período de 1998-2012. | Revista Brasileira de Geografia Medica e da Saude | ArcGIS. | Spatialization of cases by ArcGIS. |
| 2015 | Sánches-Montes et al.59 | Mexico | Leptospirosis in Mexico: epidemiology and potential distribution of human cases. | PLOS One. | QGIS, GARP and SPSS. | Creation of potential distribution model by GARP and map of distribution of cases. |
| 2015 | Nia et al.60 | Iran | Spatial and statistical analysis of Leptospirosis in Guilan Province, Iran. | Remote Sensing and Spatial Information Sciences. | ArcGIS, | Use of Moran technique to identify clusters and spatial autocorrelation. |
| 2015 | García-Ramirez et al.61 | Colombia | Geographical and occupational aspects of Leptospirosis in the Coffee-Triangle region of Colombia, 2007-2011. | Recent Patents on Anti-Infective Drug Discovery. | Kosmo | Construction of regional and epidemiological map with rate of annual incidence of cases. |
| 2016 | Gonçalves et al.34 | Brazil | Distribuição espaço-temporal da leptospirose e fatores de risco em Belém, Pará, Brasil | Ciencia & Saude Coletiva. | TerraView, EpiInfo and Biostat. | Moran’s estimation technique to measure spatial autocorrelation. |
| 2016 | Hagan et al.62 | Brazil | Spatiotemporal determinants of urban leptospirosis transmission: four-year prospective cohort study of slum residents in Brazil. | PLOS Neglected Tropical Diseases. | ArcGIS. | Construction of choropleth map of risk distribution. |
| 2016 | Lau et al.63 | Fiji | Human leptospirosis infection in Fiji: an ecoepidemiological approach to identifying risk factors and environmental drivers for transmission. | PLOS Neglected Tropical Diseases. | ArcGIS and STATA | Production of risk map through analysis of risk factors by regression model. |
| 2016 | Zhao et al.64 | China | Mapping risk of leptospirosis in China using environmental and socioeconomic data. | BMC Infectious Diseases. | ArcGIS and “R”. | Identification of risk areas by ecological niche model. |
| 2017 | Cook et al.65 | Kenya | Risk factors for leptospirosis seropositivity in slaughterhouse workers in western Kenya. | Occupational and Environmental Medicine. | ArcGIS and “R”. | Application of Kernel technique by R and Moran. |
| 2017 | Chaiblich et al.66 | Brazil | Estudo espacial de riscos à leptospirose no município do Rio de Janeiro (RJ). | Saude em Debate. | ArcGIS | Empirical Bayesian estimator and Kernel density. |
Figure 3Cloud of words representing the distribution of their frequencies in the abstracts of the analyzed articles.