Literature DB >> 32503372

Archaeal DNA Replication.

Mark D Greci1, Stephen D Bell1,2.   

Abstract

It is now well recognized that the information processing machineries of archaea are far more closely related to those of eukaryotes than to those of their prokaryotic cousins, the bacteria. Extensive studies have been performed on the structure and function of the archaeal DNA replication origins, the proteins that define them, and the macromolecular assemblies that drive DNA unwinding and nascent strand synthesis. The results from various archaeal organisms across the archaeal domain of life show surprising levels of diversity at many levels-ranging from cell cycle organization to chromosome ploidy to replication mode and nature of the replicative polymerases. In the following, we describe recent advances in the field, highlighting conserved features and lineage-specific innovations.

Entities:  

Keywords:  CMG; DNA polymerase; DNA primase; Sulfolobus; archaea; helicase

Mesh:

Substances:

Year:  2020        PMID: 32503372      PMCID: PMC7712474          DOI: 10.1146/annurev-micro-020518-115443

Source DB:  PubMed          Journal:  Annu Rev Microbiol        ISSN: 0066-4227            Impact factor:   15.500


  62 in total

1.  The GAN Exonuclease or the Flap Endonuclease Fen1 and RNase HII Are Necessary for Viability of Thermococcus kodakarensis.

Authors:  Brett W Burkhart; Lubomira Cubonova; Margaret R Heider; Zvi Kelman; John N Reeve; Thomas J Santangelo
Journal:  J Bacteriol       Date:  2017-06-13       Impact factor: 3.490

2.  Formation of a Viral Replication Focus in Sulfolobus Cells Infected by the Rudivirus Sulfolobus islandicus Rod-Shaped Virus 2.

Authors:  Laura Martínez-Alvarez; Ling Deng; Xu Peng
Journal:  J Virol       Date:  2017-06-09       Impact factor: 5.103

3.  Physical and Functional Compartmentalization of Archaeal Chromosomes.

Authors:  Naomichi Takemata; Rachel Y Samson; Stephen D Bell
Journal:  Cell       Date:  2019-09-19       Impact factor: 41.582

4.  Nucleoid structure and distribution in thermophilic Archaea.

Authors:  A Popławski; R Bernander
Journal:  J Bacteriol       Date:  1997-12       Impact factor: 3.490

5.  The Sulfolobus solfataricus GINS Complex Stimulates DNA Binding and Processive DNA Unwinding by Minichromosome Maintenance Helicase.

Authors:  Shiwei Lang; Li Huang
Journal:  J Bacteriol       Date:  2015-08-17       Impact factor: 3.490

Review 6.  The ring-shaped hexameric helicases that function at DNA replication forks.

Authors:  Michael E O'Donnell; Huilin Li
Journal:  Nat Struct Mol Biol       Date:  2018-01-29       Impact factor: 15.369

7.  Atomic structure of an archaeal GAN suggests its dual roles as an exonuclease in DNA repair and a CMG component in DNA replication.

Authors:  Takuji Oyama; Sonoko Ishino; Tsuyoshi Shirai; Takeshi Yamagami; Mariko Nagata; Hiromi Ogino; Masami Kusunoki; Yoshizumi Ishino
Journal:  Nucleic Acids Res       Date:  2016-09-05       Impact factor: 16.971

8.  Evolution of Genome Architecture in Archaea: Spontaneous Generation of a New Chromosome in Haloferax volcanii.

Authors:  Darya Ausiannikava; Laura Mitchell; Hannah Marriott; Victoria Smith; Michelle Hawkins; Kira S Makarova; Eugene V Koonin; Conrad A Nieduszynski; Thorsten Allers
Journal:  Mol Biol Evol       Date:  2018-08-01       Impact factor: 16.240

9.  The Cdc45/RecJ-like protein forms a complex with GINS and MCM, and is important for DNA replication in Thermococcus kodakarensis.

Authors:  Mariko Nagata; Sonoko Ishino; Takeshi Yamagami; Hiromi Ogino; Jan-Robert Simons; Tamotsu Kanai; Haruyuki Atomi; Yoshizumi Ishino
Journal:  Nucleic Acids Res       Date:  2017-10-13       Impact factor: 16.971

10.  Novel Families of Archaeo-Eukaryotic Primases Associated with Mobile Genetic Elements of Bacteria and Archaea.

Authors:  Darius Kazlauskas; Guennadi Sezonov; Nicole Charpin; Česlovas Venclovas; Patrick Forterre; Mart Krupovic
Journal:  J Mol Biol       Date:  2017-12-11       Impact factor: 5.469

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  6 in total

1.  Chromosome organization affects genome evolution in Sulfolobus archaea.

Authors:  Catherine Badel; Rachel Y Samson; Stephen D Bell
Journal:  Nat Microbiol       Date:  2022-05-26       Impact factor: 30.964

Review 2.  Convergent evolution in two bacterial replicative helicase loaders.

Authors:  Jillian Chase; James Berger; David Jeruzalmi
Journal:  Trends Biochem Sci       Date:  2022-03-26       Impact factor: 14.264

Review 3.  The cell biology of archaea.

Authors:  Marleen van Wolferen; Andre Arashiro Pulschen; Buzz Baum; Simonetta Gribaldo; Sonja-Verena Albers
Journal:  Nat Microbiol       Date:  2022-10-17       Impact factor: 30.964

4.  Molecular mechanisms of eukaryotic origin initiation, replication fork progression, and chromatin maintenance.

Authors:  Zuanning Yuan; Huilin Li
Journal:  Biochem J       Date:  2020-09-30       Impact factor: 3.857

5.  Phenotypic Characterization of Sulfolobus islandicus Strains Lacking the B-Family DNA Polymerases PolB2 and PolB3 Individually and in Combination.

Authors:  Peter B Bohall; Stephen D Bell
Journal:  Front Microbiol       Date:  2021-04-22       Impact factor: 5.640

6.  The biology of thermoacidophilic archaea from the order Sulfolobales.

Authors:  April M Lewis; Alejandra Recalde; Christopher Bräsen; James A Counts; Phillip Nussbaum; Jan Bost; Larissa Schocke; Lu Shen; Daniel J Willard; Tessa E F Quax; Eveline Peeters; Bettina Siebers; Sonja-Verena Albers; Robert M Kelly
Journal:  FEMS Microbiol Rev       Date:  2021-08-17       Impact factor: 16.408

  6 in total

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