Literature DB >> 32502433

Global outbreak research: harmony not hegemony.

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Year:  2020        PMID: 32502433      PMCID: PMC7266570          DOI: 10.1016/S1473-3099(20)30440-0

Source DB:  PubMed          Journal:  Lancet Infect Dis        ISSN: 1473-3099            Impact factor:   25.071


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To make clinical and biological observations within a timeframe that is likely to benefit patients during disease outbreaks, coordination of global research must match the speed of spread of novel pathogens. Time is short. Circumstances call for international collaboration to understand, treat, and prevent coronavirus disease 2019 (COVID-19). During previous infectious disease outbreaks, clinical research has often been established on an ad-hoc basis and done in silos, using different methodologies and designs. This approach limits opportunities to compare results, or to combine smaller studies to obtain answers quickly. Thus, perhaps it is self-evident that harmonisation of clinical investigation during outbreaks is desirable. In a meeting of the WHO clinical management research prioritisation group held in January, 2020, harmonised clinical characterisation research was identified as the first priority for COVID-19. Harmonisation creates opportunities for individual investigators to compare results or collaborate, without applying burdens or obligations. In our experience, the quality and breadth of research is improved by collaborative development and peer review of shared protocols. For example, in the current outbreak, a clinician might design a study to identify risk factors for progression, co-infections, and mechanisms of critical illness. However, clinicians might overlook the need to obtain serum for research groups with the capability to make new assays for seroepidemiology, or peripheral blood mononuclear cells for monoclonal antibody therapeutics during this process. Wide collaboration leads to better, faster science. Achieving global coordination is difficult enough at the best of times; during a crisis it might seem impossible. But with each new crisis, the same questions arise again and again, and so, the same designs can be used to tackle them. We believe that global harmonisation is possible, at least in the intermittently indispensable field of outbreak research. To achieve such a goal, harmonised investigation needs to be made easier than establishing isolated independent studies, must respect autonomy and sovereignty of investigators, and relinquish normal routes of academic recognition for this work. To this end, in 2012, a single, standardised generic research protocol was created for clinical characterisation of any emerging infection (the International Severe Acute Respiratory and Emerging Infection Consortium [ISARIC]/WHO Clinical Characterisation Protocol [CCP]), which was the result of many years of international and cross-speciality consensus-building. Since the fundamental research questions in a new outbreak are predictable, the protocol can be established and approved in so-called peacetime, maintained in a hibernating state, then rapidly implemented when required. Carefully designed, flexible biological sampling schedules are included in tiers according to local resources, modular additional studies for specific situations, and scalable case report forms. These tools were released under an open-source licence—ie, anyone can download these materials and use, adapt, or distribute them. Clinical research can feel like it is 95% about filling in forms. We filled in some of the forms, so you don't have to. In 2016, the ISARIC/WHO CCP was implemented in Brazil in response to the emergence of Zika virus and chikungunya virus in Latin America, facilitating studies of viral shedding and serology. The CCP was also used for the establishment of cohort studies of critically ill patients with Middle East respiratory syndrome. At present, the Uganda Virus Research Institute (Entebbe, Uganda) is using the protocol to study severe acute febrile illness and severe influenza. The value of this approach is becoming apparent in the age of COVID-19. The original reports on clinical findings in COVID-19 used harmonised data collection.5, 6 46 countries have registered to record clinical data using the ISARIC/WHO CCP Case Report Form and investigators in many countries are planning to use the CCP biological sampling protocol to coordinate studies of transmission, prognostication, pathogenesis, and diagnostics (appendix). Understanding the genetic mechanisms underlying susceptibility might directly advance our understanding of disease mechanisms and possible treatments, but robust studies require recruitment of large numbers of critically ill patients, which requires open, collegiate, and global collaboration. Genetics Of Mortality In Critical Care is an open consortium in which clinicians have been recruiting critically ill patients since 2016. Importantly, this work is led by the clinicians treating the patients, in collaboration with experts in host genetics. Operating clinical trials at global scale presents many additional challenges, but even in this domain, substantial progress has been made. Before the COVID-19 pandemic, the critical care community created a highly efficient, randomised, embedded multifactorial adaptive platform trial for community-acquired pneumonia (REMAP-CAP). This single trial was established in 13 countries with the capacity to test new hypotheses quickly. Perhaps most ambitious of all, WHO has developed a global platform—the SOLIDARITY trial—for the evaluation of widely-available interventions to treat COVID-19. Catastrophes, such as pandemics, drive innovation and lead to marked social change. Within the scientific research community, we believe that perceptions of academic excellence have long undervalued teamwork and collegiality. We hope our colleagues across the world will make use of these tools, either in collaboration or independently, to harmonise clinical research efforts and fulfil the duties of medical science to humanity in the shortest time possible.
  9 in total

1.  Translational genomics. Targeting the host immune response to fight infection.

Authors:  J Kenneth Baillie
Journal:  Science       Date:  2014-05-23       Impact factor: 47.728

2.  Critically Ill Patients With the Middle East Respiratory Syndrome: A Multicenter Retrospective Cohort Study.

Authors:  Yaseen M Arabi; Awad Al-Omari; Yasser Mandourah; Fahad Al-Hameed; Anees A Sindi; Basem Alraddadi; Sarah Shalhoub; Abdullah Almotairi; Kasim Al Khatib; Ahmed Abdulmomen; Ismael Qushmaq; Ahmed Mady; Othman Solaiman; Abdulsalam M Al-Aithan; Rajaa Al-Raddadi; Ahmed Ragab; Ghaleb A Al Mekhlafi; Abdulrahman Al Harthy; Ayman Kharaba; Mashael Al Ahmadi; Musharaf Sadat; Hanan Al Mutairi; Eman Al Qasim; Jesna Jose; Maliha Nasim; Abdulaziz Al-Dawood; Laura Merson; Robert Fowler; Frederick G Hayden; Hanan H Balkhy
Journal:  Crit Care Med       Date:  2017-10       Impact factor: 7.598

Review 3.  Treatable traits and therapeutic targets: Goals for systems biology in infectious disease.

Authors:  Clark D Russell; J Kenneth Baillie
Journal:  Curr Opin Syst Biol       Date:  2017-04-27

4.  Open source clinical science for emerging infections.

Authors:  Jake W Dunning; Laura Merson; Gernot G U Rohde; Zhancheng Gao; Malcolm G Semple; Dat Tran; Anthony Gordon; Piero L Olliaro; Saye H Khoo; Roberto Bruzzone; Peter Horby; J Perren Cobb; Kajsa-Stina Longuere; Paul Kellam; Alistair Nichol; Stephen Brett; Dean Everett; Timothy S Walsh; Tran-Tinh Hien; Hongjie Yu; Maria Zambon; Guillermo Ruiz-Palacios; Trudie Lang; Tamuna Akhvlediani; Frederick G Hayden; John Marshall; Steve Webb; Derek C Angus; Nahoko Shindo; Sylvie van der Werf; Peter J M Openshaw; Jeremy Farrar; Gail Carson; J Kenneth Baillie
Journal:  Lancet Infect Dis       Date:  2014-01       Impact factor: 25.071

5.  Clinical features of patients infected with 2019 novel coronavirus in Wuhan, China.

Authors:  Chaolin Huang; Yeming Wang; Xingwang Li; Lili Ren; Jianping Zhao; Yi Hu; Li Zhang; Guohui Fan; Jiuyang Xu; Xiaoying Gu; Zhenshun Cheng; Ting Yu; Jiaan Xia; Yuan Wei; Wenjuan Wu; Xuelei Xie; Wen Yin; Hui Li; Min Liu; Yan Xiao; Hong Gao; Li Guo; Jungang Xie; Guangfa Wang; Rongmeng Jiang; Zhancheng Gao; Qi Jin; Jianwei Wang; Bin Cao
Journal:  Lancet       Date:  2020-01-24       Impact factor: 79.321

6.  Clinical course and outcomes of critically ill patients with SARS-CoV-2 pneumonia in Wuhan, China: a single-centered, retrospective, observational study.

Authors:  Xiaobo Yang; Yuan Yu; Jiqian Xu; Huaqing Shu; Jia'an Xia; Hong Liu; Yongran Wu; Lu Zhang; Zhui Yu; Minghao Fang; Ting Yu; Yaxin Wang; Shangwen Pan; Xiaojing Zou; Shiying Yuan; You Shang
Journal:  Lancet Respir Med       Date:  2020-02-24       Impact factor: 30.700

7.  Epidemiologic and Spatiotemporal Characterization of Influenza and Severe Acute Respiratory Infection in Uganda, 2010-2015.

Authors:  Matthew J Cummings; Barnabas Bakamutumaho; John Kayiwa; Timothy Byaruhanga; Nicholas Owor; Barbara Namagambo; Allison Wolf; Joseph F Wamala; Stephen S Morse; Julius J Lutwama; Max R O'Donnell
Journal:  Ann Am Thorac Soc       Date:  2016-12

Review 8.  The role of host genetic factors in respiratory tract infectious diseases: systematic review, meta-analyses and field synopsis.

Authors:  Inga Patarčić; Andrea Gelemanović; Mirna Kirin; Ivana Kolčić; Evropi Theodoratou; Kenneth J Baillie; Menno D de Jong; Igor Rudan; Harry Campbell; Ozren Polašek
Journal:  Sci Rep       Date:  2015-11-03       Impact factor: 4.379

9.  Differential Shedding and Antibody Kinetics of Zika and Chikungunya Viruses, Brazil.

Authors:  Fernando A Bozza; Andres Moreira-Soto; Alexandra Rockstroh; Carlo Fischer; Alessandra D Nascimento; Andrea S Calheiros; Christian Drosten; Patrícia T Bozza; Thiago Moreno L Souza; Sebastian Ulbert; Jan Felix Drexler
Journal:  Emerg Infect Dis       Date:  2019-02       Impact factor: 6.883

  9 in total
  19 in total

1.  Enabling evidence to tackle everyday diseases to mitigate another pandemic.

Authors:  Trudie Lang
Journal:  Gates Open Res       Date:  2022-04-07

2.  An Electronic Data Capture Tool for Data Collection During Public Health Emergencies: Development and Usability Study.

Authors:  Joan Brown; Manas Bhatnagar; Hugh Gordon; Jared Goodner; J Perren Cobb; Karen Lutrick
Journal:  JMIR Hum Factors       Date:  2022-06-09

3.  Platelet proteome reveals features of cell death, antiviral response and viral replication in covid-19.

Authors:  Monique R O Trugilho; Isaclaudia G Azevedo-Quintanilha; João S M Gesto; Emilly Caroline S Moraes; Samuel C Mandacaru; Mariana M Campos; Douglas M Oliveira; Suelen S G Dias; Viviane A Bastos; Marlon D M Santos; Paulo C Carvalho; Richard H Valente; Eugenio D Hottz; Fernando A Bozza; Thiago Moreno L Souza; Jonas Perales; Patrícia T Bozza
Journal:  Cell Death Discov       Date:  2022-07-16

4.  Tocilizumab for treatment of mechanically ventilated patients with COVID-19.

Authors:  Emily C Somers; Gregory A Eschenauer; Jonathan P Troost; Jonathan L Golob; Tejal N Gandhi; Lu Wang; Nina Zhou; Lindsay A Petty; Ji Hoon Baang; Nicholas O Dillman; David Frame; Kevin S Gregg; Dan R Kaul; Jerod Nagel; Twisha S Patel; Shiwei Zhou; Adam S Lauring; David A Hanauer; Emily Martin; Pratima Sharma; Christopher M Fung; Jason M Pogue
Journal:  medRxiv       Date:  2020-06-03

5.  Liver injury predicts overall mortality in severe COVID-19: a prospective multicenter study in Brazil.

Authors:  Fernanda Manhães Pozzobon; Hugo Perazzo; Fernando Augusto Bozza; Rosana Souza Rodrigues; Renata de Mello Perez; Maria Chiara Chindamo
Journal:  Hepatol Int       Date:  2021-02-03       Impact factor: 6.047

6.  The prevalence and impact of pre-existing sleep disorder diagnoses and objective sleep parameters in patients hospitalized for COVID-19.

Authors:  Cathy A Goldstein; Muneer Rizvydeen; Deirdre A Conroy; Louise M O'Brien; Gita Gupta; Emily C Somers; Pratima Sharma; Jonathan L Golob; Jonathan P Troost; Helen J Burgess
Journal:  J Clin Sleep Med       Date:  2021-05-01       Impact factor: 4.062

7.  Inflammatory profiles across the spectrum of disease reveal a distinct role for GM-CSF in severe COVID-19.

Authors:  Ryan S Thwaites; Ashley Sanchez Sevilla Uruchurtu; Matthew K Siggins; Felicity Liew; Clark D Russell; Shona C Moore; Cameron Fairfield; Edwin Carter; Simon Abrams; Charlotte-Eve Short; Thilipan Thaventhiran; Emma Bergstrom; Zoe Gardener; Stephanie Ascough; Christopher Chiu; Annemarie B Docherty; David Hunt; Yanick J Crow; Tom Solomon; Graham P Taylor; Lance Turtle; Ewen M Harrison; Jake Dunning; Malcolm G Semple; J Kenneth Baillie; Peter Jm Openshaw
Journal:  Sci Immunol       Date:  2021-03-10

8.  Platelet activation and platelet-monocyte aggregate formation trigger tissue factor expression in patients with severe COVID-19.

Authors:  Eugenio D Hottz; Isaclaudia G Azevedo-Quintanilha; Lohanna Palhinha; Lívia Teixeira; Ester A Barreto; Camila R R Pão; Cassia Righy; Sérgio Franco; Thiago M L Souza; Pedro Kurtz; Fernando A Bozza; Patrícia T Bozza
Journal:  Blood       Date:  2020-09-10       Impact factor: 22.113

9.  What is the recovery rate and risk of long-term consequences following a diagnosis of COVID-19? A harmonised, global longitudinal observational study protocol.

Authors:  Louise Sigfrid; Muge Cevik; Edwin Jesudason; Wei Shen Lim; Jordi Rello; John Amuasi; Fernando Bozza; Carlo Palmieri; Daniel Munblit; Jan Cato Holter; Anders Benjamin Kildal; Luis Felipe Reyes; Clark D Russell; Antonia Ho; Lance Turtle; Thomas M Drake; Anna Beltrame; Katrina Hann; Ibrahim Richard Bangura; Robert Fowler; Sulaiman Lakoh; Colin Berry; David J Lowe; Joanne McPeake; Madiha Hashmi; Anne Margarita Dyrhol-Riise; Chloe Donohue; Daniel Plotkin; Hayley Hardwick; Natalie Elkheir; Nazir I Lone; Annemarie Docherty; Ewen Harrison; J Kenneth Baille; Gail Carson; Malcolm G Semple; Janet T Scott
Journal:  BMJ Open       Date:  2021-03-10       Impact factor: 2.692

10.  COVID-19 symptoms at hospital admission vary with age and sex: results from the ISARIC prospective multinational observational study.

Authors: 
Journal:  Infection       Date:  2021-06-25       Impact factor: 3.553

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