Literature DB >> 32493788

Preprocedural Surveillance Testing for SARS-CoV-2 in an Asymptomatic Population in the Seattle Region Shows Low Rates of Positivity.

James A Mays1, Alexander L Greninger1, Keith R Jerome1,2, John B Lynch3, Patrick C Mathias4,5.   

Abstract

Entities:  

Keywords:  COVID-19; SARS-CoV-2; procedures; surveillance

Mesh:

Year:  2020        PMID: 32493788      PMCID: PMC7383532          DOI: 10.1128/JCM.01193-20

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


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LETTER

Seattle-region hospitals have been impacted for several months by community spread of the coronavirus disease of 2019 (COVID-19) (1, 2). Although testing was initially focused on the diagnosis of symptomatic patients, this effort has now expanded to include surveillance of asymptomatic patients to protect health care workers and prevent nosocomial infections. There is an urgent need to understand best practices for the delivery of routine medical care during an ongoing outbreak (3). Here, we report rates of SARS-CoV-2 infection in asymptomatic patients screened prior to admission or a surgical or aerosol-generating procedure. On 13 April 2020, our hospital system began universal surveillance screening of asymptomatic patients prior to admission (n = 1,269; 43.6% female; median age, 55 years; standard deviation [SD] = 20.2) and surgeries and aerosol-generating procedures (n = 787; 38% female; median age, 55 years; SD = 19.0). The testing indication was stated at the time of order. PCR testing was performed on nasopharyngeal swabs using the Washington State emergency use-authorized University of Washington CDC-based laboratory-developed test (n = 176) or FDA-authorized DiaSorin Simplexa SARS-CoV-2 (n = 1,241), Hologic Panther Fusion SARS-CoV-2 (n = 2,591), or Roche cobas SARS-CoV-2 tests (n = 423) (4). This study was approved by the Institutional Review Board of the University of Washington Medical Center under a consent waiver (STUDY00009734). For patients undergoing procedures, 5 of 787 patients (0.6%) were positive for SARS-CoV-2. For patients who were asymptomatic and tested at the time of admission, 4 of 1,269 patients (0.3%) were positive, and 2 of 1,269 (0.2%) were inconclusive; inconclusive results were treated as low-level positives and retested until negative. Among these patients, 4/9 positive and 1/2 inconclusive patients were intubated, sedated, intoxicated, or cognitively impaired at the time of assessment. By comparison, among inpatients with concerning symptoms (n = 1,336; 38.6% female; median age, 53; SD = 18.7), 137 of 1,336 patients (10.3%) were positive, and 1 of 1,336 (0.07%) was inconclusive. Among asymptomatic patients tested for any other reason (e.g., exposure risk), 32 of 425 (7.5%) were positive, and 1 of 425 (0.2%) was inconclusive. During this time, the outpatient prevalence of SARS-CoV-2 active infection in our region was 2 to 5% (5). The application in our region of universal testing for SARS-CoV-2 prior to surgery or aerosolizing procedures and hospital admissions shows that the positivity rate for SARS-CoV-2 is low (<1%) in asymptomatic patients without known exposure risk factors. This measure is notably lower than reported measurements during an outbreak in New York City that found a positivity rate of 13.7% in asymptomatic pregnant women (6). The rate of subclinical infection likely varies with the scale of the community outbreak. Even during a community-wide outbreak in Seattle, our data show a low prevalence of COVID-19 infection in the preprocedural setting. These data provide an assessment of exposure risk around the time of admission in a population that uses medical services. The Greater Seattle Coronavirus Assessment Network (SCAN) also published results from 18 days of home-based testing and reported no positive tests in 1,392 patients reporting no COVID-19-like illness (7). Although other studies support a large proportion of asymptomatic infections, data from this metropolitan outbreak suggest a different pattern. Importantly, this universal surveillance testing decreased the use of personal protective equipment (PPE), identified appropriate precautions for patients, and reduced the risk of nosocomial infection in cases where infection was not suspected.
  6 in total

1.  Changes in SARS-CoV-2 Positivity Rate in Outpatients in Seattle and Washington State, March 1-April 16, 2020.

Authors:  April Kaur Randhawa; Leigh H Fisher; Alexander L Greninger; Shuying Sue Li; Jessica Andriesen; Lawrence Corey; Keith R Jerome
Journal:  JAMA       Date:  2020-06-09       Impact factor: 56.272

2.  Managing Cancer Care During the COVID-19 Pandemic: Agility and Collaboration Toward a Common Goal.

Authors:  Masumi Ueda; Renato Martins; Paul C Hendrie; Terry McDonnell; Jennie R Crews; Tracy L Wong; Brittany McCreery; Barbara Jagels; Aaron Crane; David R Byrd; Steven A Pergam; Nancy E Davidson; Catherine Liu; F Marc Stewart
Journal:  J Natl Compr Canc Netw       Date:  2020-03-20       Impact factor: 11.908

3.  Comparison of Commercially Available and Laboratory-Developed Assays for In Vitro Detection of SARS-CoV-2 in Clinical Laboratories.

Authors:  Joshua A Lieberman; Gregory Pepper; Samia N Naccache; Meei-Li Huang; Keith R Jerome; Alexander L Greninger
Journal:  J Clin Microbiol       Date:  2020-07-23       Impact factor: 5.948

4.  First Case of 2019 Novel Coronavirus in the United States.

Authors:  Michelle L Holshue; Chas DeBolt; Scott Lindquist; Kathy H Lofy; John Wiesman; Hollianne Bruce; Christopher Spitters; Keith Ericson; Sara Wilkerson; Ahmet Tural; George Diaz; Amanda Cohn; LeAnne Fox; Anita Patel; Susan I Gerber; Lindsay Kim; Suxiang Tong; Xiaoyan Lu; Steve Lindstrom; Mark A Pallansch; William C Weldon; Holly M Biggs; Timothy M Uyeki; Satish K Pillai
Journal:  N Engl J Med       Date:  2020-01-31       Impact factor: 91.245

5.  Universal Screening for SARS-CoV-2 in Women Admitted for Delivery.

Authors:  Desmond Sutton; Karin Fuchs; Mary D'Alton; Dena Goffman
Journal:  N Engl J Med       Date:  2020-04-13       Impact factor: 91.245

6.  Covid-19 in Critically Ill Patients in the Seattle Region - Case Series.

Authors:  Pavan K Bhatraju; Bijan J Ghassemieh; Michelle Nichols; Richard Kim; Keith R Jerome; Arun K Nalla; Alexander L Greninger; Sudhakar Pipavath; Mark M Wurfel; Laura Evans; Patricia A Kritek; T Eoin West; Andrew Luks; Anthony Gerbino; Chris R Dale; Jason D Goldman; Shane O'Mahony; Carmen Mikacenic
Journal:  N Engl J Med       Date:  2020-03-30       Impact factor: 91.245

  6 in total
  3 in total

1.  Viral genomes reveal patterns of the SARS-CoV-2 outbreak in Washington State.

Authors:  Nicola F Müller; Cassia Wagner; Chris D Frazar; Pavitra Roychoudhury; Jover Lee; Louise H Moncla; Benjamin Pelle; Matthew Richardson; Erica Ryke; Hong Xie; Lasata Shrestha; Amin Addetia; Victoria M Rachleff; Nicole A P Lieberman; Meei-Li Huang; Romesh Gautom; Geoff Melly; Brian Hiatt; Philip Dykema; Amanda Adler; Elisabeth Brandstetter; Peter D Han; Kairsten Fay; Misja Ilcisin; Kirsten Lacombe; Thomas R Sibley; Melissa Truong; Caitlin R Wolf; Michael Boeckh; Janet A Englund; Michael Famulare; Barry R Lutz; Mark J Rieder; Matthew Thompson; Jeffrey S Duchin; Lea M Starita; Helen Y Chu; Jay Shendure; Keith R Jerome; Scott Lindquist; Alexander L Greninger; Deborah A Nickerson; Trevor Bedford
Journal:  Sci Transl Med       Date:  2021-05-03       Impact factor: 17.956

Review 2.  Use of emerging testing technologies and approaches for SARS-CoV-2: review of literature and global experience in an Australian context.

Authors:  Maryza Graham; Susan A Ballard; Shivani Pasricha; Belinda Lin; Tuyet Hoang; Timothy Stinear; Julian Druce; Mike Catton; Norelle Sherry; Deborah Williamson; Benjamin P Howden
Journal:  Pathology       Date:  2021-08-10       Impact factor: 5.306

3.  Viral genomes reveal patterns of the SARS-CoV-2 outbreak in Washington State.

Authors:  Nicola F Müller; Cassia Wagner; Chris D Frazar; Pavitra Roychoudhury; Jover Lee; Louise H Moncla; Benjamin Pelle; Matthew Richardson; Erica Ryke; Hong Xie; Lasata Shrestha; Amin Addetia; Victoria M Rachleff; Nicole A P Lieberman; Meei-Li Huang; Romesh Gautom; Geoff Melly; Brian Hiatt; Philip Dykema; Amanda Adler; Elisabeth Brandstetter; Peter D Han; Kairsten Fay; Misja Llcisin; Kristen Lacombe; Thomas R Sibley; Melissa Truong; Caitlin R Wolf; Michael Boeckh; Janet A Englund; Michael Famulare; Barry R Lutz; Mark J Rieder; Matthew Thompson; Jeffrey S Duchin; Lea M Starita; Helen Y Chu; Jay Shendure; Keith R Jerome; Scott Lindquist; Alexander L Greninger; Deborah A Nickerson; Trevor Bedford
Journal:  medRxiv       Date:  2020-09-30
  3 in total

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