| Literature DB >> 32493341 |
El Tigani Ahmed El Tigani-Asil1, Ghada Elderdiri Abdelwahab1, Jayamohanan Thikkal Veedu Payyan Veedu1, Abdelmalik Ibrahim Khalafalla1, Zayed Saud Abdullah Mohamed1, Hassan Zackaria Ali Ishag2, Asma Abdi Mohamed Shah1, Mohamed Ali Abdulla Alhosani1, Salama Suhail Mohammed Al Muhairi1.
Abstract
BACKGROUND: Mastitis is a disease of economic concern that affects dairy industry worldwide. This study aimed to investigate and identify possible etiologies encountered in an episode of acute gangrenous mastitis in lactating she-camels in Al Dhafra region, Abu Dhabi Emirate, United Arab Emirates (UAE). Beside the routine clinical examination, conventional bacteriological methods were used to isolate and identify possible aerobic/anaerobic bacterial or fungal pathogens from cultured milk samples collected from the mastitic she-camels. Moreover, quantitative real-time polymerase chain reaction (qPCR) was used for the detection of Mycoplasma agalactiae and Mycoplasma bovis strains, and the 16S rRNA gene was sequenced to confirm the isolation. The isolates were also tested for their susceptibility to antimicrobials.Entities:
Keywords: 16S rRNA gene; Agalactiae; Dromedary camels; Gangrenous mastitis; Streptococcus agalactiae
Mesh:
Substances:
Year: 2020 PMID: 32493341 PMCID: PMC7271422 DOI: 10.1186/s12917-020-02382-8
Source DB: PubMed Journal: BMC Vet Res ISSN: 1746-6148 Impact factor: 2.741
Fig. 1Acute swelling of udder quarters and formation of scabs
Fig. 2Acute swelling of udder with gangrenous inflammation and amputation of teats, quarters or entire udder (arrows)
Fig. 3Colony morphology of Streptococcus agalactiae, blood agar 24 h at 37 °C
Fig. 4β-hemolytic colonies of Streptococcus agalactiae, blood agar 24 h at 37 °C
Fig. 5Gram stain film showing single and short chains of Streptococcus spp
GenBank accession numbers from the 16S rRNA gene partial sequence of Streptococcus agalactiae isolated from she-camels collected milk with mastitis
| GenBank submission | Isolate sequence (strain) | Accession number |
|---|---|---|
| SUB6137525 | Seq1 (CMAUAE) | MN267805.1 |
| SUB6137525 | Seq2 (CMBUAE) | MN267806.1 |
| SUB6137525 | Seq3 (CMCUAE) | MN267807.1 |
| SUB6137525 | Seq4 (CMDUAE) | MN267808.1 |
| SUB6137525 | Seq5 (CMEUAE) | MN267809.1 |
| SUB6137525 | Seq6 (CMFUAE) | MN267810.1 |
Fig. 6Mapping of the isolates (accession numbers: MN267805.1 to MN267810.1) to the reference genome (Streptococcus agalactiae 2603 V/R, NC_004116.1). Mapping and visualization performed with NCBI-BLASTN services
Mapping of the isolates (accession numbers: MN267805.1 to MN267810.1) against reference genome (Streptococcus agalactiae 2603 V/R, NC_004116.1). Span of mapped isolates including identity information were shown
| Accession number/locus tag | Span | Length (bp) | Identity | |
|---|---|---|---|---|
| Start | End | |||
| Sa16SA (16S rRNA gene of Ref. genome, complete) | 16,411 | 17,917 | 1507 | |
| MN267806 (16S rRNA gene of isolate1, partial) | 16,425 | 17,324 | 900 | 100% |
| MN267807 (16S rRNA gene of isolate 2, partial) | 16,427 | 17,317 | 891 | 100% |
| MN267805 (16S rRNA gene of isolate 3, partial) | 16,431 | 17,293 | 863 | 100% |
| MN267810 (16S rRNA gene of isolate 4, partial) | 16,433 | 17,315 | 883 | 100% |
| MN267809 (16S rRNA gene of isolate 5, partial) | 16,439 | 17,300 | 862 | 100% |
| MN267808 (16S rRNA gene of isolate 6, partial) | 16,453 | 17,315 | 863 | 100% |
Fig. 7Phylogenetic analysis of 16S rRNA gene partial sequences. Phylogenetic analysis of partial sequence (862 bp) of 16S rRNA gene sequence was constructed with Neighbor-Joining method [17]. The optimal tree with sum of branch length = 1.11754156 is shown. The evolutionary distances were computed using the Kimura 2-parameter method [18]. Analysis involved 32 nucleotide sequences. Evolutionary analyses were conducted in MEGA X with Bootstrap test at 1000 replicates. Sequences from the present study are colored. Sequences from GenBank were given the accession number followed by the name of the circulated strain, species infected and then the country name