Literature DB >> 32492582

Unsupervised lesion detection via image restoration with a normative prior.

Xiaoran Chen1, Suhang You2, Kerem Can Tezcan3, Ender Konukoglu4.   

Abstract

Unsupervised lesion detection is a challenging problem that requires accurately estimating normative distributions of healthy anatomy and detecting lesions as outliers without training examples. Recently, this problem has received increased attention from the research community following the advances in unsupervised learning with deep learning. Such advances allow the estimation of high-dimensional distributions, such as normative distributions, with higher accuracy than previous methods. The main approach of the recently proposed methods is to learn a latent-variable model parameterized with networks to approximate the normative distribution using example images showing healthy anatomy, perform prior-projection, i.e. reconstruct the image with lesions using the latent-variable model, and determine lesions based on the differences between the reconstructed and original images. While being promising, the prior-projection step often leads to a large number of false positives. In this work, we approach unsupervised lesion detection as an image restoration problem and propose a probabilistic model that uses a network-based prior as the normative distribution and detect lesions pixel-wise using MAP estimation. The probabilistic model punishes large deviations between restored and original images, reducing false positives in pixel-wise detections. Experiments with gliomas and stroke lesions in brain MRI using publicly available datasets show that the proposed approach outperforms the state-of-the-art unsupervised methods by a substantial margin, +0.13 (AUC), for both glioma and stroke detection. Extensive model analysis confirms the effectiveness of MAP-based image restoration.
Copyright © 2020 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Autoencoding models; Lesion detection; Unsupervised learning

Mesh:

Year:  2020        PMID: 32492582     DOI: 10.1016/j.media.2020.101713

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  7 in total

1.  A large, curated, open-source stroke neuroimaging dataset to improve lesion segmentation algorithms.

Authors:  Sook-Lei Liew; Bethany P Lo; Miranda R Donnelly; Artemis Zavaliangos-Petropulu; Jessica N Jeong; Giuseppe Barisano; Alexandre Hutton; Julia P Simon; Julia M Juliano; Anisha Suri; Zhizhuo Wang; Aisha Abdullah; Jun Kim; Tyler Ard; Nerisa Banaj; Michael R Borich; Lara A Boyd; Amy Brodtmann; Cathrin M Buetefisch; Lei Cao; Jessica M Cassidy; Valentina Ciullo; Adriana B Conforto; Steven C Cramer; Rosalia Dacosta-Aguayo; Ezequiel de la Rosa; Martin Domin; Adrienne N Dula; Wuwei Feng; Alexandre R Franco; Fatemeh Geranmayeh; Alexandre Gramfort; Chris M Gregory; Colleen A Hanlon; Brenton G Hordacre; Steven A Kautz; Mohamed Salah Khlif; Hosung Kim; Jan S Kirschke; Jingchun Liu; Martin Lotze; Bradley J MacIntosh; Maria Mataró; Feroze B Mohamed; Jan E Nordvik; Gilsoon Park; Amy Pienta; Fabrizio Piras; Shane M Redman; Kate P Revill; Mauricio Reyes; Andrew D Robertson; Na Jin Seo; Surjo R Soekadar; Gianfranco Spalletta; Alison Sweet; Maria Telenczuk; Gregory Thielman; Lars T Westlye; Carolee J Winstein; George F Wittenberg; Kristin A Wong; Chunshui Yu
Journal:  Sci Data       Date:  2022-06-16       Impact factor: 8.501

2.  Using Occlusion-Based Saliency Maps to Explain an Artificial Intelligence Tool in Lung Cancer Screening: Agreement Between Radiologists, Labels, and Visual Prompts.

Authors:  Ziba Gandomkar; Pek Lan Khong; Amanda Punch; Sarah Lewis
Journal:  J Digit Imaging       Date:  2022-04-28       Impact factor: 4.903

Review 3.  Recent advances and clinical applications of deep learning in medical image analysis.

Authors:  Xuxin Chen; Ximin Wang; Ke Zhang; Kar-Ming Fung; Theresa C Thai; Kathleen Moore; Robert S Mannel; Hong Liu; Bin Zheng; Yuchen Qiu
Journal:  Med Image Anal       Date:  2022-04-04       Impact factor: 13.828

4.  WVALE: Weak variational autoencoder for localisation and enhancement of COVID-19 lung infections.

Authors:  Qinghua Zhou; Shuihua Wang; Xin Zhang; Yu-Dong Zhang
Journal:  Comput Methods Programs Biomed       Date:  2022-05-14       Impact factor: 7.027

5.  Anomaly detection for the individual analysis of brain PET images.

Authors:  Ninon Burgos; M Jorge Cardoso; Jorge Samper-González; Marie-Odile Habert; Stanley Durrleman; Sébastien Ourselin; Olivier Colliot
Journal:  J Med Imaging (Bellingham)       Date:  2021-04-05

6.  Study protocol: retrospectively mining multisite clinical data to presymptomatically predict seizure onset for individual patients with Sturge-Weber.

Authors:  Pooja Vedmurthy; Anna L R Pinto; Doris D M Lin; Anne M Comi; Yangming Ou
Journal:  BMJ Open       Date:  2022-02-04       Impact factor: 2.692

Review 7.  Interpretation and visualization techniques for deep learning models in medical imaging.

Authors:  Daniel T Huff; Amy J Weisman; Robert Jeraj
Journal:  Phys Med Biol       Date:  2021-02-02       Impact factor: 3.609

  7 in total

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