Literature DB >> 32490072

In situ soil moisture and temperature network in genhe watershed and saihanba area in China.

Lingmei Jiang1, Jian Wang1, Huizhen Cui1, Gongxue Wang1, Tianjie Zhao2, Shaojie Zhao3, Linna Chai3, Xiaojing Liu1, Jianwei Yang1.   

Abstract

The dataset presented in this article is related to the work "Evaluation and Analysis of SMAP, AMSR2, and MEaSUREs Freeze/Thaw Products in China [1]". Soil moisture and temperature are important variables of land-atmosphere energy exchange, monitoring vegetation growth, predicting drought disasters and climate and hydrological modelling [2], [3], [4], [5], [6]. This work provides detailed information on in situ soil moisture and temperature data network established in the Genhe watershed and Saihanba area in China, respectively. The Genhe watershed represents the complex surface heterogeneity in Northeast China. Therefore, data from 22 in situ sites were established in the Genhe watershed since March 2016 to improve the dynamic analysis and modeling of remotely sensed information for complex land surfaces. Saihanba is currently China's largest manmade forest and has a unique alpine wetland and a complete aquatic ecosystem. There are 29 in situ sites deployed in Saihanba since August 2018 for studying the cold temperate continental monsoon climate and estimating forest carbon storage capacity and carbon emissions from manmade forests. Soil temperature and permittivity data in the network were measured using ECH2O EC-5TM probes (Decagon Devices, Inc., Washington, USA, https://www.metergroup.com/) and XingShiTu (XST) probes (BEIJING XST Co., Ltd., www.xingshitu.com) every 30 min at depths of 3, 5, and 10 cm for the Genhe watershed continuous automatic observation network, and depths of 5 and 10 cm for the Saihanba continuous automatic observation network. In the Genhe watershed, soil moisture and soil temperature data in the network were automatically collected using the EM50 data collection system. The Saihanba area has the XST data collection system to record soil temperature and permittivity. The permittivity data collected with the XST data collector were transformed to soil moisture data (volumetric water content) based on the formula developed by [7]. The datasets of the Genhe watershed and Saihanba area consist of raw data acquired by the data collector and processed data of soil moisture and temperature. The Saihanba dataset also includes the calibration data based on soil texture. The result of temporal variations analysis in observed data in the Genhe Watershed and the processing in observed data in the saihanba area show that the long-term in situ soil moisture and temperature datasets can be used for the validation/calibration and improvement of the soil moisture and soil freeze/thaw algorithm.
© 2020 The Author(s).

Entities:  

Keywords:  China; Genhe watershed; Saihanba area; Soil moisture; Soil temperature

Year:  2020        PMID: 32490072      PMCID: PMC7256458          DOI: 10.1016/j.dib.2020.105693

Source DB:  PubMed          Journal:  Data Brief        ISSN: 2352-3409


Specifications table

Value of the Data

The dataset can provide ground truth of soil moisture and soil freeze/thaw spatial scales as evaluation or calibration of soil moisture and freeze/thaw estimates from microwave remote sensing and land hydrological modeling at regional scales. This dataset is beneficial to study the land surface and atmosphere interactions and climate change and water cycle on a regional scale. The dataset can be further used to optimize the distribution of sites by analyzing the representativeness of the data collected at those sites and to obtain high-quality observations at low cost. The dataset complements the existing ground observations in China.

Data Description

The dataset contains raw data and processed data collected from the Genhe watershed and the Saihanba area. All the data are stored in a ZIP archive. The data file of each automatic observation network is named with the site name and the data level. The observed variables and data profiles at each site in the Genhe watershed and Saihanba area are shown in Table 1. There are three depth measurements (3, 5, and 10 cm) in the Genhe watershed and two (5 and 10 cm) in Saihanba. In Table 1, field names such as Soil_moisture_5 and Soil_temperature_5 mean the measurements of soil moisture and soil temperature at the depth of 5 cm below the surface in the observational network. The raw data are soil temperature and permittivity for the Saihanba area and soil moisture and soil temperature for the Genhe watershed, respectively.
Table 1

Automatic observation network observation items and data overview.

Field nameColumn nameData typeDimensionExample
Measurement TimeData acquisition time//8/29/2018 1:30 (Saihanba area, A1)
Soil_moisture_3−3 cm soil volumetric water contentFloatm3/m3/
Soil_temperature_3−3 cm soil temperatureFloat°C/
Soil_ permittivity_5−5 cm soil permittivityFloat/12.7
Soil_moisture_5−5 cm soil volumetric water contentFloatm3/m30.2379
Soil_temperature_5−5 cm soil temperatureFloat°C15.6
Soil_ permittivity_10−10 cm soil permittivityFloat/15.02
Soil_moisture_10−10 cm soil volumetric water contentFloatm3/m30.2761
Soil_temperature_10−10 cm soil temperatureFloat°C17.1
Automatic observation network observation items and data overview. According to the sensor specifications, the accuracy of soil temperature and soil moisture observations in the Genhe watershed taken with the EC-5TM probes are 1°C and 2–3%, respectively. The accuracy of soil temperature and soil moisture observations in Saihanba area taken with the XST probes are 0.5°C and 3%, respectively. The data that could not be collected are marked as NaN. There are four sites (A8, A10, A12, and P4) with data collection failure, five sites (A2, A4, P1, P3, and P5) with data collection failure during winter, and one site (P10) with data collection failure at 10 cm depth in Saihanba.

Experimental Design, Materials, and Methods

Automatic observation network design and data acquisition method

Genhe Watershed Observation Network The Genhe watershed has a cold and humid temperate forest climate and a continental monsoon climate. It is located in northern Inner Mongolia on the western slope of the northern Greater Khingan Range. This region has hills with gentle slopes (slopes of less than 15 degrees occupy 80% of the area) and a mean altitude of approximately 800 m. The overall geomorphology is represented by quasi-flat ground and rounded mountains with flat tops at similar altitudes [8,9]. Because of its significant geographical location, the Genhe watershed provides a representative coverage of the complex land surface and hydrometeorological conditions in Northeast China. Therefore, the in situ soil moisture and temperature observed network was conducted in the Genhe watershed to improve the dynamic analysis and remote sensing modeling of surface parameters, including soil moisture and surface frozen/thaw status [1,9]. In addition, the dataset would provide the surface condition to the regional biomass and carbon fluxes estimation of forest vegetation in Northeast China. The Genhe Watershed Observation Network has been operated on both sides of the Genhe watershed (50.16°–50.66°N, 120.5°–121°E) since October 2013 (7 sites), and the number of available sites was gradually increased to 22 from October 2015 to May 2017. There are four (site 1–site 3 and site 5), one (site 9), three (sites 11, 12, and 14), nine (site 15–20, 22, 24, and 26), and five (site 21, 23, 27–29) sites that have been collecting data successfully since October 2013, April 2015, October 2015, September 2016, and May 2017, respectively. Therefore, to ensure the validity of the dataset, we only provide the data with continuity and integrity and the description of observation sites from March 2016 to February 2018. The detailed information on the sites is presented in Fig. 1 and Table 2. The land cover map in Fig. 1 is from the National Geomatics Center of China (GlobeLand30-2010, http://glc30.tianditu.com).
Fig. 1

Distribution of sites in Genhe Watershed Observation Network.

Table 2

Site information of Genhe Watershed Observation Network.

Site nameLongitude (deg.)Latitude (deg.)Altitude (m)Land coverData available time (Month/Day/Year)
Site 1120.52250.505705Grass10/07/2013–02/28/2018
Site 2120.71150.451699Larix gmelinii10/10/2013–02/28/2018
Site 3120.84050.450628Shrub, birch forest10/06/2013–02/28/2018
Site 4120.52550.426608Grass, Shrub10/07/2013–03/31/2014
Site 5120.53150.413628Grass, Shrub10/07/2013–02/28/2018
Site 6120.53350.412673Grass10/07/2013–10/09/2015
Site 7120.53950.415792Grass10/07/2013–09/19/2015
Site 8120.57550.509738Birch forest09/26/2014–04/22/2015
Site 9120.87650.565705Birch forest04/21/2015–02/28/2018
Site 10120.95450.555728Larix gmelinii04/21/2015–10/02/2015
Site 11120.83650.300724Shrub, Birch forest10/10/2015–02/28/2018
Site 12120.88350.367651Shrub, Birches10/10/2015–02/28/2018
Site 13120.76150.364754Birch forest10/10/2015–05/10/2017
Site 14120.58150.511731Birch forest10/09/2015–02/28/2018
Site 15120.84350.575730Larix gmelinii, Birches09/22/2016–02/28/2018
Site 16120.92650.492763Birch forest09/22/2016–02/28/2018
Site 17120.98750.451640Grass, Shrub09/23/2016–02/28/2018
Site 18120.48450.327608Crop09/24/2016–02/28/2018
Site 19120.69650.329644Shrub, Birches09/24/2016–02/28/2018
Site 20120.58950.310714Grass, Birches09/25/2016–02/28/2018
Site 21120.58650.220731Grass05/14/2017–02/28/2018
Site 22120.49950.209654Crop09/24/2016–02/28/2018
Site 23120.67550.223754Grass, Birches05/12/2017–02/28/2018
Site 24120.92750.309668Grass09/25/2016–02/28/2018
Site 25120.90450.344681Grass, Birches09/25/2016–05/10/2017
Site 26120.94850.257691Grass09/25/2016–02/28/2018
Site 27120.51050.530788Birch forest05/09/2017–02/28/2018
Site 28120.53750.463641Grass, Shrub05/09/2017–02/28/2018
Site 29120.97750.340802birch forest05/15/2017–02/28/2018
Distribution of sites in Genhe Watershed Observation Network. Site information of Genhe Watershed Observation Network. The Genhe Watershed features forests, shrubland, grassland, and cultivated land. The soil texture is silt (50–54%), sand (6–9%), clay (39–44%), and organic matter (7–8%). The site of the Genhe Watershed Observation Network is equipped with the EM50 data collection system with EC-5TM probes. Soil temperature and moisture were measured every 30 min at depths of 3, 5, and 10 cm below the surface at each site. The raw data obtained using the probes are collected and stored by the data collection system, and the time series of data are stored manually from the data collection system. To ensure the reliability of the Genhe Watershed observation data, this work evaluated the relationship between soil moisture, soil temperature, and precipitation time series (Fig. 2) (precipitation data from the China Meteorological Data Service Center, http://data.cma.cn/). Fig. 2 (a) shows that the seasonal variations in soil moisture at depths of 3, 5, and 10 cm are similar, and the fluctuations in soil moisture at different depths within a day are not obvious. Soil moisture at three depths increases with precipitation. As the frequency of rainfall increases, soil moisture at three depths varies significantly and show an obvious stratification. Overall, the response of soil moisture to precipitation is relatively sensitive. Fig. 2 (a) shows that temporal variations in soil temperature at the depths of 3, 5, and 10 cm are similar. From January to March and from mid-October to December, surface temperature is below 0°C and the soil is frozen. When the soil is frozen, the soil moisture value remains relatively stable without significant changes. At the beginning of April, soil temperature increases above 0°C, the frozen soil begins to melt, and soil moisture gradually increases. This result is consistent with the local climate patterns. With outlier filtering, this dataset meets the requirements of data accuracy for the soil moisture retrieval algorithm development and satellite soil moisture product validation.
Fig. 2

Temporal variations in observed data in the Genhe Watershed Observation Network (a: soil moisture and precipitation; b: soil temperature).

Temporal variations in observed data in the Genhe Watershed Observation Network (a: soil moisture and precipitation; b: soil temperature).

Saihanba Observation Network

The Saihanba area is located in the transition zone from Yanshan Mountain to Inner Mongolia, with an elevation of 1100–1800 m and a semi-arid and semi-humid climate. As the source of the Luan River, Saihanba is a key area for global change research [10]. The soil of this area is composed of silt (12%), sand (79%), and clay (9%). With complex climate conditions and large spatial heterogeneity of soil moisture and temperature within the satellite radiometer coarse pixels of 10–50 km, sparse meteorological observation sites cannot reflect the spatial distribution of soil moisture and temperature in Saihanba. Therefore, it is important to set up a soil temperature and moisture observation network at the microwave pixel scale over the Saihanba area. The Saihanba soil temperature and moisture automatic observation network (42°–42.5°N, 117°–117.5°E) measures data both at the passive microwave pixel scale (e.g., SMAP, SMOS, AMSR2, and FY-3B) and active microwave satellite pixel scale (e.g., Sentinel-1). The observation area of the active and passive microwave pixels is 0.1° × 0.1° and 0.25° × 0.25°, respectively. There are 12 sites (named hereafter A (Active)) in active microwave pixels and 17 sites (named hereafter P (Passive)) in passive microwave pixels. The distribution of automatic observation sites is shown in Fig. 3. The land cover map is from GlobeLand30-2010 as in Fig. 1. The detailed geographical location and data availability time window at each site are shown in Table 3. Each site is equipped with the XST data collection system. In active and passive microwave pixels, XST and 5TM probes are used to measure soil temperature and permittivity at each site, respectively. One site in the passive microwave pixel (P5) also belongs to the active microwave pixel, and both XST (P5_XST) and 5TM (P5_5TM) probes are buried. At each station, two probes are used to measure soil temperature and permittivity. The two probes are horizontally inserted at 5 and 10 cm depths. The XST data loggers supplied by two dry batteries record data every 30 min and can keep working for more than one year. Same as the automatic observation network in the Genhe watershed, to prevent the rainwater damage to the data collector, the XST data loggers are sealed with a self-sealing bag. The raw soil temperature and permittivity data are measured at 5 and 10 cm depths below the surface and transformed back to the indoor server daily using a data transmission device.
Fig. 3

Distribution of sites in Saihanba observation network.

Table 3

Site information of Saihanba observation network.

Site nameLongitude (deg.)Latitude (deg.)Altitude (m)Land coverData available time (Month/Day/Year)
A1117.231142.31311470Coniferous forests08/28/2018–02/28/2019
A2117.236742.31271498Grassland08/28/2018–02/28/2019
A3117.241642.31241520Grassland08/28/2018–02/28/2019
A4117.231042.30841500Coniferous forests08/27/2018–02/28/2019
A5117.236542.30891512Grassland08/28/2018-02/28/2019
A6117.241442.30821522Grassland08/28/2018–02/28/2019
A7117.230642.30511450Grassland08/27/2018–02/28/2019
A8117.235842.30551468Grassland/
A9117.233142.31081500Coniferous forests08/28/2018–02/28/2019
A10117.239042.31021515Coniferous forests/
A11117.233242.30721499Coniferous forests08/27/2018–02/28/2019
A12117.239242.30671492Grassland/
P1117.134642.36001442Coniferous forests09/24/2018–02/28/2019
P2117.207042.35051454Coniferous forests09/24/2018–02/28/2019
P3117.348342.35721753Grassland08/29/2018–02/28/2019
P4117.282242.34751520Grassland/
P5117.241942.30511498Grassland08/28/2018–02/28/2019
P6117.296442.32691532Coniferous forests08/29/2018–02/28/2019
P7117.130242.26101353Grassland08/29/2018–02/28/2019
P8117.187042.28741428Shrub08/29/2018–02/28/2019
P9117.293642.24951494Grassland09/23/2018–02/28/2019
P10117.359742.25591555Coniferous forests09/22/2018–02/28/2019
P11117.199442.20121436Shrub09/24/2018–02/28/2019
P12117.236042.23691500Grassland09/23/2018–02/28/2019
P13117.302142.16441349Birch forest09/23/2018–02/28/2019
P14117.133342.13021612Coniferous forests09/23/2018–02/28/2019
P15117.242342.13581314Coniferous forests09/23/2018–02/28/2019
P16117.370142.14921334Coniferous forests09/22/2018–02/28/2019
P17117.336742.18781639Coniferous forests09/22/2018–02/28/2019
Distribution of sites in Saihanba observation network. Site information of Saihanba observation network. In order to ensure the authenticity of the observation data, we collected soil samples and used the soil texture data to calibrate the soil moisture data in Saihanba. The field soil samples were collected horizontally using a ring cutter with a volume of 100 mL and diameter of 5 cm (Fig. 4). The ring cutter's center corresponds to the measured depth (−5 cm, −10 cm) while collecting the soil samples. Soil permittivity data, recorded using the probes, were converted into the volumetric water content (W) using the formula developed by [7] (Eq. 1). The volumetric water content of the soil samples collected at each site was obtained in the laboratory using a drying box at 105°C for 24 h. Then, the linear relationship between the volumetric water content of soil samples and probes was used to calibrate the soil moisture observed by XST.
Fig. 4

Soil sample collection with a ring cutter.

Soil sample collection with a ring cutter.

Data processing

The raw data stored using the EM50 data logger included soil moisture and temperature data in the Genhe watershed, while the raw data collected with the XST data logger were soil permittivity and temperature data in the Saihanba area. Permittivity was converted to the volumetric water content (W) using Eq. (1).where ɛ is the measured soil permittivity. The observation data of the Genhe watershed are composed of level 0 (L0) and level 1 (L1) data, and the observation data of Saihanba are composed of L0, L1, and level 2 (L2) in the Microsoft Excel format. L0 data are the raw observation data of surface parameters taken every 30 min in the Excel format. L1 data are the valid soil temperature and moisture data taken every 30 min in the Excel format. L2 data of Saihanba are L1 soil temperature data and calibrated soil moisture data obtained by calibrating the L1 soil moisture data using the linear calibration equation in the Excel format. Fig. 5 shows the relationship between the volumetric water content calculated using the soil samples and measured with sensors over the Saihanba area.
Fig. 5

Relationship between the volumetric water content (W) calculated using soil samples and measured with the sensors over Saihanba area.

Relationship between the volumetric water content (W) calculated using soil samples and measured with the sensors over Saihanba area.
SubjectEarth-Surface Processes
Specific subject areaSoil moisture and temperature, Remote Sensing, Validation.
Type of dataTables, figures.The data are stored in Microsoft Excel format in a zip package.
How data were acquiredSoil temperature and permittivity were automatically measured using 5TM and XST probes. Processed data were obtained using MATLAB software processing tool.
Data formatRaw and processed.
Parameters for data collectionSoil moisture and temperature at the depths of 3, 5, and 10 cm for the Genhe watershed and 5 and 10 cm for the Saihanba area.
Description of data collectionSoil moisture (m3/m3) and temperature (°C) data were collected and stored using the EM50 data logger in the Genhe watershed. Soil permittivity (dimensionless) and temperature (°C) data were collected and stored using the XST data logger in the Saihanba area.The long-term observation data of the Genhe watershed were manually exported and stored. The observation data of the Saihanba area were transferred back to the indoor wireless network server every day.
Data source locationGenhe watershed, Inner Mongolia, China (50.16°–50.66°N, 120.5°–121°E)Saihanba area, Hebei Province, China (42°–42.5°N, 117°–117.5°E)
Data accessibilityRepository name: Mendeley DataData identification number: http://dx.doi.org/10.17632/hj22ymt7xj.1Direct URL to data: https://data.mendeley.com/datasets/hj22ymt7xj/1
Related research articleJ. Wang, L.M. Jiang, H.Z. Cui, G.X. Wang, J.W. Yang, X.J. Liu, and X. Su, Evaluation and analysis of SMAP, AMSR2 and MEaSUREs freeze/thaw products in China. Remote Sensing of Environment, 2020. 242: p. 111734. https://doi.org/10.1016/j.rse.2020.111734.
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1.  The Complicate Observations and Multi-Parameter Land Information Constructions on Allied Telemetry Experiment (COMPLICATE).

Authors:  Xin Tian; Zengyuan Li; Erxue Chen; Qinhuo Liu; Guangjian Yan; Jindi Wang; Zheng Niu; Shaojie Zhao; Xin Li; Yong Pang; Zhongbo Su; Christiaan van der Tol; Qingwang Liu; Chaoyang Wu; Qing Xiao; Le Yang; Xihan Mu; Yanchen Bo; Yonghua Qu; Hongmin Zhou; Shuai Gao; Linna Chai; Huaguo Huang; Wenjie Fan; Shihua Li; Junhua Bai; Lingmei Jiang; Ji Zhou
Journal:  PLoS One       Date:  2015-09-02       Impact factor: 3.240

  1 in total

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