Literature DB >> 32487456

Single-cell RNA sequencing identifies novel cell types in Drosophila blood.

Yulong Fu1, Xiaohu Huang2, Peng Zhang3, Joyce van de Leemput2, Zhe Han4.   

Abstract

Drosophila has been extensively used to model the human blood-immune system, as both systems share many developmental and immune response mechanisms. However, while many human blood cell types have been identified, only three were found in flies: plasmatocytes, crystal cells and lamellocytes. To better understand the complexity of fly blood system, we used single-cell RNA sequencing technology to generate comprehensive gene expression profiles for Drosophila circulating blood cells. In addition to the known cell types, we identified two new Drosophila blood cell types: thanacytes and primocytes. Thanacytes, which express many stimulus response genes, are involved in distinct responses to different types of bacteria. Primocytes, which express cell fate commitment and signaling genes, appear to be involved in keeping stem cells in the circulating blood. Furthermore, our data revealed four novel plasmatocyte subtypes (Ppn+, CAH7+, Lsp+ and reservoir plasmatocytes), each with unique molecular identities and distinct predicted functions. We also identified cross-species markers from Drosophila hemocytes to human blood cells. Our analysis unveiled a more complex Drosophila blood system and broadened the scope of using Drosophila to model human blood system in development and disease.
Copyright © 2020 Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, and Genetics Society of China. Published by Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Blood; Drosophila; Plasmatocyte; Primocyte; Single-cell RNA-seq; Thanacyte

Year:  2020        PMID: 32487456      PMCID: PMC7321924          DOI: 10.1016/j.jgg.2020.02.004

Source DB:  PubMed          Journal:  J Genet Genomics        ISSN: 1673-8527            Impact factor:   4.275


  36 in total

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3.  Eater, a transmembrane protein mediating phagocytosis of bacterial pathogens in Drosophila.

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Journal:  Cell       Date:  2005-10-21       Impact factor: 41.582

4.  A short receptor downregulates JAK/STAT signalling to control the Drosophila cellular immune response.

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5.  Discordant regulation of granzyme H and granzyme B expression in human lymphocytes.

Authors:  Karin A Sedelies; Thomas J Sayers; Kirsten M Edwards; Weisan Chen; Daniel G Pellicci; Dale I Godfrey; Joseph A Trapani
Journal:  J Biol Chem       Date:  2004-04-06       Impact factor: 5.157

6.  Asrij maintains the stem cell niche and controls differentiation during Drosophila lymph gland hematopoiesis.

Authors:  Vani Kulkarni; Rohan J Khadilkar; Srivathsa S Magadi; M S Srivathsa; Maneesha S Inamdar
Journal:  PLoS One       Date:  2011-11-14       Impact factor: 3.240

Review 7.  Granzymes: a family of lymphocyte granule serine proteases.

Authors:  J A Trapani
Journal:  Genome Biol       Date:  2001-11-23       Impact factor: 13.583

8.  Transdifferentiation and Proliferation in Two Distinct Hemocyte Lineages in Drosophila melanogaster Larvae after Wasp Infection.

Authors:  Ines Anderl; Laura Vesala; Teemu O Ihalainen; Leena-Maija Vanha-Aho; István Andó; Mika Rämet; Dan Hultmark
Journal:  PLoS Pathog       Date:  2016-07-14       Impact factor: 6.823

9.  Thioester-containing proteins regulate the Toll pathway and play a role in Drosophila defence against microbial pathogens and parasitoid wasps.

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10.  Peroxidasin: a novel enzyme-matrix protein of Drosophila development.

Authors:  R E Nelson; L I Fessler; Y Takagi; B Blumberg; D R Keene; P F Olson; C G Parker; J H Fessler
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  21 in total

1.  Paths and pathways that generate cell-type heterogeneity and developmental progression in hematopoiesis.

Authors:  Juliet R Girard; Lauren M Goins; Dung M Vuu; Mark S Sharpley; Carrie M Spratford; Shreya R Mantri; Utpal Banerjee
Journal:  Elife       Date:  2021-10-29       Impact factor: 8.140

Review 2.  Single-cell RNA sequencing in Drosophila: Technologies and applications.

Authors:  Hongjie Li
Journal:  Wiley Interdiscip Rev Dev Biol       Date:  2020-09-16       Impact factor: 5.814

3.  Identification of functionally distinct macrophage subpopulations in Drosophila.

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Journal:  Front Immunol       Date:  2021-05-13       Impact factor: 7.561

5.  Comparative RNA-Seq analyses of Drosophila plasmatocytes reveal gene specific signatures in response to clean injury and septic injury.

Authors:  Elodie Ramond; Jan Paul Dudzic; Bruno Lemaitre
Journal:  PLoS One       Date:  2020-06-29       Impact factor: 3.240

6.  Editorial: Recent Advances in Drosophila Cellular and Humoral Innate Immunity.

Authors:  Laura Vesala; Dan Hultmark; Susanna Valanne
Journal:  Front Immunol       Date:  2020-10-02       Impact factor: 7.561

7.  Immune Cell Production Is Targeted by Parasitoid Wasp Virulence in a Drosophila-Parasitoid Wasp Interaction.

Authors:  Jordann E Trainor; Pooja Kr; Nathan T Mortimer
Journal:  Pathogens       Date:  2021-01-08

Review 8.  Macrophages and Their Organ Locations Shape Each Other in Development and Homeostasis - A Drosophila Perspective.

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9.  DRscDB: A single-cell RNA-seq resource for data mining and data comparison across species.

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10.  Single-cell RNA-seq analysis reveals penaeid shrimp hemocyte subpopulations and cell differentiation process.

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