| Literature DB >> 32485729 |
Yu Zhang1, Guiqiu Zhao2.
Abstract
BACKGROUND We assessed the potential association between monocyte chemotactic protein 1 (MCP-1) variants (rs1024611 and rs3760396) and age-related macular degeneration (AMD) susceptibility among Chinese Han people. MATERIAL AND METHODS Our research included 129 AMD patients and 131 healthy controls. Genotyping for MCP-1 variants was performed in the 2 groups, and genotype and allele distributions were checked between groups by χ² analysis. Odds ratio (OR) and 95% confidence interval (CI) reflected the potential association between MCP-1 variants and AMD risk. The linkage disequilibrium of polymorphisms was detected using Haploview. RESULTS Significant differences in rs1024611 genotype distributions were detected between the 2 groups, and homozygous carriers with GG genotype had higher AMD incidence (P<0.05, OR=2.650, 95% CI=1.127-6.231). The rs1024611 G allele frequency was significantly higher in AMD patients, suggesting that the G allele promotes AMD onset (P<0.05, OR=1.447, 95% CI=1.013-2.068). Strong linkage disequilibrium was found between rs1024611 and rs3760396, and haplotype Ars1024611-Crs3760396 was significantly associated with decreased risk of AMD (P=0.001, OR=0.502, 95% CI=0.335-0.752). CONCLUSIONS MCP-1 rs1024611 variant appears to contribute to risk of AMD in the Chinese Han population, and the interaction of MCP-1 polymorphisms may also influence individual susceptibility to AMD.Entities:
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Year: 2020 PMID: 32485729 PMCID: PMC7291784 DOI: 10.12659/MSM.921584
Source DB: PubMed Journal: Med Sci Monit ISSN: 1234-1010
Primer sequences for MCP-1 gene polymorphisms rs1024611 and rs3760396.
| SNP | Primer sequences | |
|---|---|---|
| rs1024611 | Sense | 5′-CCGAGATGTTCCCAGCACAG- 3′ |
| Reverse | 5′-CTGCTTTGCTTGTGCCTCTT- 3′ | |
| rs3760396 | Sense | 5′-GCAACAGCCTCCTAACTC-3′ |
| Reverse | 5′-AATAGCCTGCTCAAGGTC-3′ | |
The baseline demographics of AMD and healthy controls.
| Characteristics | Case, n=129 | Control, n=131 | P | |
|---|---|---|---|---|
| Age (year) | The range | 52–88 | 51–84 | 0.124 |
| Mean value | 70.89±8.96 | 69.24±8.40 | ||
| Gender (%) | Male | 63 (48.84) | 70 (53.44) | 0.458 |
| Female | 66 (51.16) | 61 (46.56) | ||
| Smoking (%) | Yes | 45 (34.88) | 38 (29.01) | 0.310 |
| No | 84 (65.12) | 93 (70.99) | ||
| Drinking (%) | Yes | 41 (31.78) | 32 (24.43) | 0.187 |
| No | 88 (68.22) | 99 (75.57) | ||
| Hypertension (%) | Yes | 62 (48.06) | 35 (26.72) | <0.001 |
| No | 67 (51.94) | 96 (73.28) | ||
AMD – age-related macular degeneration.
Genotype and allele distributions of MCP-1 gene polymorphisms rs1024611 and rs3760396 in case and control group.
| Genotype/allele | Case n=129 (%) | Control n=131 (%) | χ2 | P | OR (95% CI) |
|---|---|---|---|---|---|
| rs1024611 | |||||
| AA | 10 (7.75) | 21 (16.03) | – | – | 1 |
| GA | 66 (51.16) | 68 (51.91) | 2.927 | 0.087 | 2.038 (0.893–4.654) |
| GG | 53 (41.09) | 42 (32.06) | 5.177 | 0.023 | 2.650 (1.127–6.231) |
| A | 86 (33.33) | 110 (41.98) | – | – | 1 |
| G | 172 (66.67) | 152 (58.02) | 4.143 | 0.042 | 1.447 (1.013–2.068) |
| rs3760396 | |||||
| CC | 101 (78.29) | 112 (85.50) | – | – | 1 |
| GC | 25 (19.38) | 18 (13.74) | 1.646 | 0.200 | 1.540 (0.794–2.988) |
| GG | 3 (2.33) | 1 (0.76) | 1.197 | 0.274 | 3.327 (0.341–32.495) |
| C | 227 (87.98) | 242 (92.37) | – | – | 1 |
| G | 31 (12.02) | 20 (7.63) | 2.822 | 0.093 | 1.652 (0.915–2.983) |
Haplotype analysis of MCP-1 rs1024611 and rs3760396 polymorphisms in AMD occurrence.
| rs1024611–rs3760396 | Haplotype (%) | P | OR (95% CI) | |
|---|---|---|---|---|
| Case, 2n=258 | Control, 2n=262 | |||
| G–C | 175 (67.83) | 152 (58.02) | – | Ref. |
| A–C | 52 (20.16) | 90 (34.35) | 0.001 | 0.502 (0.335–0.752) |
| A–G | 31 (12.01) | 20 (7.63) | 0.332 | 1.346 (0.737–2.460) |