Literature DB >> 32483315

A tale of non-canonical tails: gene regulation by post-transcriptional RNA tailing.

Sha Yu1, V Narry Kim2,3.   

Abstract

RNA tailing, or the addition of non-templated nucleotides to the 3' end of RNA, is the most frequent and conserved type of RNA modification. The addition of tails and their composition reflect RNA maturation stages and have important roles in determining the fate of the modified RNAs. Apart from canonical poly(A) polymerases, which add poly(A) tails to mRNAs in a transcription-coupled manner, a family of terminal nucleotidyltransferases (TENTs), including terminal uridylyltransferases (TUTs), modify RNAs post-transcriptionally to control RNA stability and activity. The human genome encodes 11 different TENTs with distinct substrate specificity, intracellular localization and tissue distribution. In this Review, we discuss recent advances in our understanding of non-canonical RNA tails, with a focus on the functions of human TENTs, which include uridylation, mixed tailing and post-transcriptional polyadenylation of mRNAs, microRNAs and other types of non-coding RNA.

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Year:  2020        PMID: 32483315     DOI: 10.1038/s41580-020-0246-8

Source DB:  PubMed          Journal:  Nat Rev Mol Cell Biol        ISSN: 1471-0072            Impact factor:   94.444


  194 in total

Review 1.  Translational control by changes in poly(A) tail length: recycling mRNAs.

Authors:  Laure Weill; Eulàlia Belloc; Felice-Alessio Bava; Raúl Méndez
Journal:  Nat Struct Mol Biol       Date:  2012-06-05       Impact factor: 15.369

Review 2.  Multifunctional deadenylase complexes diversify mRNA control.

Authors:  Aaron C Goldstrohm; Marvin Wickens
Journal:  Nat Rev Mol Cell Biol       Date:  2008-03-12       Impact factor: 94.444

Review 3.  Mechanism and regulation of mRNA polyadenylation.

Authors:  D F Colgan; J L Manley
Journal:  Genes Dev       Date:  1997-11-01       Impact factor: 11.361

4.  Effects of intracerebroventricular administration of biological active peptides on plasma renin activity in conscious rats.

Authors:  T Iwata; K Hiwada; E Murakami; T Kokubu
Journal:  Clin Exp Hypertens A       Date:  1984

5.  Recognition of polyadenylate RNA by the poly(A)-binding protein.

Authors:  R C Deo; J B Bonanno; N Sonenberg; S K Burley
Journal:  Cell       Date:  1999-09-17       Impact factor: 41.582

Review 6.  Cytoplasmic polyadenylation and translational control.

Authors:  Ana Villalba; Olga Coll; Fátima Gebauer
Journal:  Curr Opin Genet Dev       Date:  2011-04-30       Impact factor: 5.578

7.  PABP Cooperates with the CCR4-NOT Complex to Promote mRNA Deadenylation and Block Precocious Decay.

Authors:  Hyerim Yi; Joha Park; Minju Ha; Jaechul Lim; Hyeshik Chang; V Narry Kim
Journal:  Mol Cell       Date:  2018-06-21       Impact factor: 17.970

Review 8.  Polyuridylation in Eukaryotes: A 3'-End Modification Regulating RNA Life.

Authors:  Paola Munoz-Tello; Lional Rajappa; Sandrine Coquille; Stéphane Thore
Journal:  Biomed Res Int       Date:  2015-05-11       Impact factor: 3.411

Review 9.  Cytoplasmic RNA: a case of the tail wagging the dog.

Authors:  Chris J Norbury
Journal:  Nat Rev Mol Cell Biol       Date:  2013-08-29       Impact factor: 94.444

10.  mRNA Deadenylation Is Coupled to Translation Rates by the Differential Activities of Ccr4-Not Nucleases.

Authors:  Michael W Webster; Ying-Hsin Chen; James A W Stowell; Najwa Alhusaini; Thomas Sweet; Brenton R Graveley; Jeff Coller; Lori A Passmore
Journal:  Mol Cell       Date:  2018-06-21       Impact factor: 17.970

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  26 in total

1.  PABP prevents the untimely decay of select mRNA populations in human cells.

Authors:  Sam Kajjo; Sahil Sharma; Shan Chen; William R Brothers; Megan Cott; Benedeta Hasaj; Predrag Jovanovic; Ola Larsson; Marc R Fabian
Journal:  EMBO J       Date:  2022-02-14       Impact factor: 11.598

2.  Reproducible and efficient new method of RNA 3'-end labelling by CutA nucleotidyltransferase-mediated CC-tailing.

Authors:  Rafal Tomecki; Kamil Kobylecki; Karolina Drazkowska; Malwina Hyjek-Skladanowska; Andrzej Dziembowski
Journal:  RNA Biol       Date:  2021-11-12       Impact factor: 4.652

3.  The ZCCHC14/TENT4 complex is required for hepatitis A virus RNA synthesis.

Authors:  You Li; Ichiro Misumi; Tomoyuki Shiota; Lu Sun; Erik M Lenarcic; Hyejeong Kim; Takayoshi Shirasaki; Adriana Hertel-Wulff; Taylor Tibbs; Joseph E Mitchell; Kevin L McKnight; Craig E Cameron; Nathaniel J Moorman; David R McGivern; John M Cullen; Jason K Whitmire; Stanley M Lemon
Journal:  Proc Natl Acad Sci U S A       Date:  2022-07-07       Impact factor: 12.779

Review 4.  Transcriptome-wide measurement of poly(A) tail length and composition at subnanogram total RNA sensitivity by PAIso-seq.

Authors:  Yusheng Liu; Yiwei Zhang; Jiaqiang Wang; Falong Lu
Journal:  Nat Protoc       Date:  2022-07-13       Impact factor: 17.021

5.  Natural killer (NK) cell-derived extracellular-vesicle shuttled microRNAs control T cell responses.

Authors:  Sara G Dosil; Sheila Lopez-Cobo; Ana Rodriguez-Galan; Irene Fernandez-Delgado; Marta Ramirez-Huesca; Paula Milan-Rois; Milagros Castellanos; Alvaro Somoza; Manuel José Gómez; Hugh T Reyburn; Mar Vales-Gomez; Francisco Sánchez Madrid; Lola Fernandez-Messina
Journal:  Elife       Date:  2022-07-29       Impact factor: 8.713

6.  Crystal structure and functional properties of the human CCR4-CAF1 deadenylase complex.

Authors:  Ying Chen; Elena Khazina; Elisa Izaurralde; Oliver Weichenrieder
Journal:  Nucleic Acids Res       Date:  2021-06-21       Impact factor: 16.971

Review 7.  Co-Transcriptional RNA Processing in Plants: Exploring from the Perspective of Polyadenylation.

Authors:  Jing Yang; Ying Cao; Ligeng Ma
Journal:  Int J Mol Sci       Date:  2021-03-24       Impact factor: 5.923

Review 8.  LARP1 and LARP4: up close with PABP for mRNA 3' poly(A) protection and stabilization.

Authors:  Sandy Mattijssen; Guennadi Kozlov; Bruno D Fonseca; Kalle Gehring; Richard J Maraia
Journal:  RNA Biol       Date:  2021-01-31       Impact factor: 4.652

9.  Liver Transcriptome Dynamics During Hibernation Are Shaped by a Shifting Balance Between Transcription and RNA Stability.

Authors:  Austin E Gillen; Rui Fu; Kent A Riemondy; Jennifer Jager; Bin Fang; Mitchell A Lazar; Sandra L Martin
Journal:  Front Physiol       Date:  2021-05-21       Impact factor: 4.566

Review 10.  The MicroRNA Family Gets Wider: The IsomiRs Classification and Role.

Authors:  Luisa Tomasello; Rosario Distefano; Giovanni Nigita; Carlo M Croce
Journal:  Front Cell Dev Biol       Date:  2021-06-09
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