Literature DB >> 32477661

Exploring Novel Computable Knowledge in Structured Drug Product Labels.

Scott A Malec1, Richard D Boyce1.   

Abstract

This paper introduces a database derived from Structured Product Labels (SPLs). SPLs are legally mandated snapshots containing information on all drugs released to market in the United States. Since publication is not required for pre-trial findings, we hypothesize that SPLs may contain knowledge absent in the literature, and hence "novel." SemMedDB is an existing database of computable knowledge derived from the literature. If SPL content could be similarly transformed, novel clinically relevant assertions in the SPLs could be identified through comparison with SemMedDB. After we derive a database (containing 4,297,481 assertions), we compare the extracted content with SemMedDB for recent FDA drug approvals. We find that novelty between the SPLs and the literature is nuanced, due to the redundancy of SPLs. Highlighting areas for improvement and future work, we conclude that SPLs contain a wealth of novel knowledge relevant to research and complementary to the literature. ©2020 AMIA - All rights reserved.

Entities:  

Year:  2020        PMID: 32477661      PMCID: PMC7233092     

Source DB:  PubMed          Journal:  AMIA Jt Summits Transl Sci Proc


  33 in total

1.  Medical reversal: why we must raise the bar before adopting new technologies.

Authors:  Vinay Prasad; Adam Cifu
Journal:  Yale J Biol Med       Date:  2011-12

2.  The TETRAD Project: Constraint Based Aids to Causal Model Specification.

Authors:  R Scheines; P Spirtes; C Glymour; C Meek; T Richardson
Journal:  Multivariate Behav Res       Date:  1998-01-01       Impact factor: 5.923

Review 3.  Empirical distributional semantics: methods and biomedical applications.

Authors:  Trevor Cohen; Dominic Widdows
Journal:  J Biomed Inform       Date:  2009-02-14       Impact factor: 6.317

4.  Bio2RDF: towards a mashup to build bioinformatics knowledge systems.

Authors:  François Belleau; Marc-Alexandre Nolin; Nicole Tourigny; Philippe Rigault; Jean Morissette
Journal:  J Biomed Inform       Date:  2008-03-21       Impact factor: 6.317

5.  Embedding of semantic predications.

Authors:  Trevor Cohen; Dominic Widdows
Journal:  J Biomed Inform       Date:  2017-03-08       Impact factor: 6.317

6.  Extracting drug indication information from structured product labels using natural language processing.

Authors:  Kin Wah Fung; Chiang S Jao; Dina Demner-Fushman
Journal:  J Am Med Inform Assoc       Date:  2013-03-09       Impact factor: 4.497

7.  Automated identification of molecular effects of drugs (AIMED).

Authors:  Safa Fathiamini; Amber M Johnson; Jia Zeng; Alejandro Araya; Vijaykumar Holla; Ann M Bailey; Beate C Litzenburger; Nora S Sanchez; Yekaterina Khotskaya; Hua Xu; Funda Meric-Bernstam; Elmer V Bernstam; Trevor Cohen
Journal:  J Am Med Inform Assoc       Date:  2016-04-23       Impact factor: 4.497

8.  Rediscovering Don Swanson: the Past, Present and Future of Literature-Based Discovery.

Authors:  Neil R Smalheiser
Journal:  J Data Inf Sci       Date:  2017-12

9.  Computational approaches for pharmacovigilance signal detection: toward integrated and semantically-enriched frameworks.

Authors:  Vassilis G Koutkias; Marie-Christine Jaulent
Journal:  Drug Saf       Date:  2015-03       Impact factor: 5.606

10.  Context-driven automatic subgraph creation for literature-based discovery.

Authors:  Delroy Cameron; Ramakanth Kavuluru; Thomas C Rindflesch; Amit P Sheth; Krishnaprasad Thirunarayan; Olivier Bodenreider
Journal:  J Biomed Inform       Date:  2015-02-07       Impact factor: 6.317

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.