Literature DB >> 32476280

Fluorescence and Light Scatter Calibration Allow Comparisons of Small Particle Data in Standard Units across Different Flow Cytometry Platforms and Detector Settings.

Joshua A Welsh1, Jennifer C Jones1, Vera A Tang2.   

Abstract

Flow cytometers have been utilized for the analysis of submicron-sized particles since the late 1970s. Initially, virus analyses preceded extracellular vesicle (EV), which began in the 1990s. Despite decades of documented use, the lack of standardization in data reporting has resulted in a growing body of literature that cannot be easily interpreted, validated, or reproduced. This has made it difficult for objective assessments of both assays and instruments, in-turn leading to significant hindrances in scientific progress, specifically in the study of EVs, where the phenotypic analysis of these submicron-sized vesicles is becoming common-place in every biomedical field. Methods for fluorescence and light scatter standardization are well established and the reagents to perform these analyses are commercially available. However, fluorescence and light scatter calibration are not widely adopted by the small particle community as methods to standardize flow cytometry (FCM) data. In this proof-of-concept study carried out as a resource for use at the CYTO2019 workshop, we demonstrate for the first-time simultaneous fluorescence and light scatter calibration of small particle data to show the ease and feasibility of this method for standardized FCM data reporting. This data was acquired using standard configuration commercial flow cytometers, with commercially available materials, published methods, and freely available software tools. We show that application of light scatter, fluorescence, and concentration calibration can result in highly concordant data between FCM platforms independent of instrument collection angle, gain/voltage settings, and flow rate; thus, providing a means of cross comparison in standard units.
© 2020 International Society for Advancement of Cytometry. © 2020 International Society for Advancement of Cytometry.

Entities:  

Keywords:  EVs; calibration; fluorescence; light scatter; reference materials; small particles; virus

Mesh:

Year:  2020        PMID: 32476280      PMCID: PMC8482305          DOI: 10.1002/cyto.a.24029

Source DB:  PubMed          Journal:  Cytometry A        ISSN: 1552-4922            Impact factor:   4.714


  25 in total

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2.  Standardization of platelet-derived microparticle enumeration by flow cytometry with calibrated beads: results of the International Society on Thrombosis and Haemostasis SSC Collaborative workshop.

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Authors:  Samuel A Stoner; Erika Duggan; Danilo Condello; Abraham Guerrero; James R Turk; Padma K Narayanan; John P Nolan
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4.  Evaluating fluorescence sensitivity on flow cytometers: an overview.

Authors:  J C Wood; R A Hoffman
Journal:  Cytometry       Date:  1998-10-01

5.  Label-Free Analysis of Single Viruses with a Resolution Comparable to That of Electron Microscopy and the Throughput of Flow Cytometry.

Authors:  Ling Ma; Shaobin Zhu; Ye Tian; Wenqiang Zhang; Shuo Wang; Chaoxiang Chen; Lina Wu; Xiaomei Yan
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6.  Detection and discrimination of individual viruses by flow cytometry.

Authors:  M Hercher; W Mueller; H M Shapiro
Journal:  J Histochem Cytochem       Date:  1979-01       Impact factor: 2.479

7.  Cyt-Geist: Current and Future Challenges in Cytometry: Reports of the CYTO 2019 Conference Workshops.

Authors:  Kamila Czechowska; Joanne Lannigan; Nima Aghaeepour; Jessica B Back; Julfa Begum; Greg Behbehani; Cláudia Bispo; Daniel Bitoun; Alfonso Blanco Fernández; Samuel Tony Boova; Ryan Remy Brinkman; Christopher O Ciccolella; Bunny Cotleur; Derek Davies; Gelo Victoriano Dela Cruz; Roxana Del Rio-Guerra; Ann Marie Des Lauriers-Cox; Iyadh Douagi; Claudia Dumrese; Diana L Bonilla Escobar; Jose Estevam; Christina Ewald; Anna Fossum; Brice Gaudillière; Cherie Green; Christopher Groves; Christopher Hall; Yasmin Haque; Michael Nathan Hedrick; Karen Hogg; Elena W Y Hsieh; Jonathan Irish; James Lederer; Michael Leipold; Laura J Lewis-Tuffin; Virginia Litwin; Peter Lopez; Ines Nasdala; Jakub Nedbal; Betsy M Ohlsson-Wilhelm; Kylie M Price; Adeeb H Rahman; Radhika Rayanki; Aja M Rieger; J Paul Robinson; Howard Shapiro; Yongliang Steve Sun; Vera A Tang; Lydia Tesfa; William G Telford; Rachael Walker; Joshua A Welsh; Paul Wheeler; Attila Tárnok
Journal:  Cytometry A       Date:  2019-12       Impact factor: 4.355

8.  Leukocyte extracellular vesicle concentration is inversely associated with liver fibrosis severity in NAFLD.

Authors:  Joshua A Welsh; Eleonora Scorletti; Geraldine F Clough; Nicola A Englyst; Christopher D Byrne
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9.  Ticagrelor attenuates the increase of extracellular vesicle concentrations in plasma after acute myocardial infarction compared to clopidogrel.

Authors:  Aleksandra Gasecka; Rienk Nieuwland; Monika Budnik; Françoise Dignat-George; Ceren Eyileten; Paul Harrison; Romaric Lacroix; Aurélie Leroyer; Grzegorz Opolski; Kinga Pluta; Edwin van der Pol; Marek Postuła; Pia Siljander; Jolanta M Siller-Matula; Krzysztof J Filipiak
Journal:  J Thromb Haemost       Date:  2020-01-09       Impact factor: 5.824

10.  Optimisation of imaging flow cytometry for the analysis of single extracellular vesicles by using fluorescence-tagged vesicles as biological reference material.

Authors:  André Görgens; Michel Bremer; Rita Ferrer-Tur; Florian Murke; Tobias Tertel; Peter A Horn; Sebastian Thalmann; Joshua A Welsh; Christine Probst; Coralié Guerin; Chantal M Boulanger; Jennifer C Jones; Helmut Hanenberg; Uta Erdbrügger; Joanne Lannigan; Franz L Ricklefs; Samir El-Andaloussi; Bernd Giebel
Journal:  J Extracell Vesicles       Date:  2019-03-21
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  12 in total

1.  Exosomes in disease and regeneration: biological functions, diagnostics, and beneficial effects.

Authors:  Yun Lin; Johnathon D Anderson; Lily M A Rahnama; Shenwen V Gu; Anne A Knowlton
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2.  Tetraspanins are unevenly distributed across single extracellular vesicles and bias sensitivity to multiplexed cancer biomarkers.

Authors:  Rachel R Mizenko; Terza Brostoff; Tatu Rojalin; Hanna J Koster; Hila S Swindell; Gary S Leiserowitz; Aijun Wang; Randy P Carney
Journal:  J Nanobiotechnology       Date:  2021-08-21       Impact factor: 10.435

3.  A simple, high-throughput method of protein and label removal from extracellular vesicle samples.

Authors:  Joshua A Welsh; Bryce Killingsworth; Julia Kepley; Tim Traynor; Kathy McKinnon; Jason Savage; Deven Appel; Kenneth Aldape; Kevin Camphausen; Jay A Berzofsky; Alexander R Ivanov; Ionita H Ghiran; Jennifer C Jones
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4.  Small Particle Fluorescence and Light Scatter Calibration Using FCMPASS Software.

Authors:  Joshua A Welsh; Jennifer C Jones
Journal:  Curr Protoc Cytom       Date:  2020-09

Review 5.  Towards defining reference materials for measuring extracellular vesicle refractive index, epitope abundance, size and concentration.

Authors:  Joshua A Welsh; Edwin van der Pol; Britta A Bettin; David R F Carter; An Hendrix; Metka Lenassi; Marc-André Langlois; Alicia Llorente; Arthur S van de Nes; Rienk Nieuwland; Vera Tang; Lili Wang; Kenneth W Witwer; Jennifer C Jones
Journal:  J Extracell Vesicles       Date:  2020-09-24

6.  Ebola virus triggers receptor tyrosine kinase-dependent signaling to promote the delivery of viral particles to entry-conducive intracellular compartments.

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Journal:  PLoS Pathog       Date:  2021-01-29       Impact factor: 6.823

7.  Minimum information to report about a flow cytometry experiment on extracellular vesicles: Communication from the ISTH SSC subcommittee on vascular biology.

Authors:  Edwin van der Pol; Joshua A Welsh; Rienk Nieuwland
Journal:  J Thromb Haemost       Date:  2021-11-26       Impact factor: 16.036

8.  Multi-angle pulse shape detection of scattered light in flow cytometry for label-free cell cycle classification.

Authors:  Claudia Giesecke-Thiel; Toralf Kaiser; Daniel Kage; Kerstin Heinrich; Konrad V Volkmann; Jenny Kirsch; Kristen Feher
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9.  Irreversible alteration of extracellular vesicle and cell-free messenger RNA profiles in human plasma associated with blood processing and storage.

Authors:  Hyun Ji Kim; Matthew J Rames; Samuel Tassi Yunga; Randall Armstrong; Mayu Morita; Anh T P Ngo; Owen J T McCarty; Fehmi Civitci; Terry K Morgan; Thuy T M Ngo
Journal:  Sci Rep       Date:  2022-02-08       Impact factor: 4.379

10.  Flow Virometry Quantification of Host Proteins on the Surface of HIV-1 Pseudovirus Particles.

Authors:  Jonathan Burnie; Vera A Tang; Joshua A Welsh; Arvin T Persaud; Laxshaginee Thaya; Jennifer C Jones; Christina Guzzo
Journal:  Viruses       Date:  2020-11-12       Impact factor: 5.048

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