| Literature DB >> 32474631 |
Xu Fang1, Xiao Li2,3, Yun Bian4, Xiang Ji5, Jianping Lu1.
Abstract
OBJECTIVES: To investigate whether meaningful subgroups sharing the CT features of patients with COVID-19 pneumonia could be identified using latent class analysis (LCA) and explore the relationship between the LCA-derived subgroups and clinical types.Entities:
Keywords: Coronavirus infections; Pneumonia, Latent class analysis; Tomography, X-ray computed
Mesh:
Year: 2020 PMID: 32474631 PMCID: PMC7261041 DOI: 10.1007/s00330-020-06973-9
Source DB: PubMed Journal: Eur Radiol ISSN: 0938-7994 Impact factor: 7.034
The clinical classification of COVID-19 pneumonia from the 7th edition of the National Commission of China classification
| Types | Findings |
|---|---|
| Mild | Mild clinical symptoms (fever < 38 °C (quelled without treatment), with or without cough, no dyspnea, no gasping, no chronic disease) *No imaging findings of pneumonia |
| Moderate | Fever, respiratory symptoms *Imaging findings of pneumonia |
| Severe | Meet any of the followings: (a) Respiratory distress, RR ≥ 30 times/min (b) SpO2 < 93% at rest (c) PaO2/FiO2 ≤ 300 mmHg *Patients showing a rapid progression (> 50%) on CT imaging within 24–48 h should be managed as severe (added in the trial sixth edition) |
| Critical | Meet any of the followings: (a) Respiratory failure, need mechanical assistance (b) Shock (c) “Extra pulmonary” organ failure, intensive care unit is needed |
*CT findings
Fig. 1Flowchart visualizing the patient selection process
CT findings of latent classes identified
| Characteristic | Class 1 ( | Class 2 ( | |
|---|---|---|---|
| Total pulmonary infection volume (cm3) | 63.15 (0.10–277.30) | 461.40 (148.40–1890.90) | < 0.001 |
| Left pulmonary infection volume (cm3) | 15.60 (0.10–178.40) | 181.90 (0.10–873.40) | < 0.001 |
| Right pulmonary infection volume (cm3) | 34.80 (0.10–175.20) | 294.60 (28.90–1027.60) | < 0.001 |
| Total pulmonary volume (cm3) | 4154.55 (1943.48–7600.00) | 3367.14 (1386.08–8059.42) | < 0.001 |
| Number of lung segments | 11.00 (1.00–18.00) | 18.00 (7.00–18.00) | < 0.001 |
| Distribution, | < 0.001 | ||
| Peripheral | 148 (64.91) | 24 (8.86) | |
| Diffuse | 80 (35.09) | 247 (91.14) | |
| Attenuation, | < 0.001 | ||
| GGO | 108 (47.37) | 2 (0.74) | |
| GGO + crazy-paving pattern | 19 (8.33) | 30 (11.07) | |
| GGO + consolidation | 82 (35.96) | 32 (11.81) | |
| GGO + crazy-paving pattern + consolidation | 19 (8.33) | 207 (76.38) | |
| Maximum lesion range, | < 0.001 | ||
| ≤ 5 cm | 145 (63.60) | 12 (4.43) | |
| 5–10 cm | 77 (33.77) | 166 (61.25) | |
| > 10 cm | 6 (2.63) | 93 (34.32) | |
| Number of lesions, | < 0.001 | ||
| 1 | 7 (3.07) | 1 (0.37) | |
| 2 | 7 (3.07) | 0 | |
| ≥ 3 | 214 (93.86) | 270 (99.63) | |
| Involvement of lobes, | < 0.001 | ||
| 1 | 16 (7.02) | 2 (0.74) | |
| 2 | 34 (14.91) | 1 (0.37) | |
| 3 | 26 (11.40) | 4 (1.48) | |
| 4 | 31 (13.60) | 7 (2.58) | |
| 5 | 121 (53.07) | 257 (94.83) | |
| Air bronchogram, | < 0.001 | ||
| No | 198 (86.84) | 85 (31.37) | |
| Yes | 30 (13.16) | 186 (68.63) | |
| Dilatation of vessels, | < 0.001 | ||
| No | 82 (35.96) | 2 (0.74) | |
| Yes | 146 (64.04) | 269 (99.26) | |
| Hilar and mediastinal lymph nodes enlargement, | < 0.001 | ||
| No | 201 (88.16) | 199 (73.43) | |
| Yes | 27 (11.84) | 72 (26.57) | |
| Pleural effusion, | < 0.001 | ||
| No | 223 (97.81) | 234 (86.35) | |
| Yes | 5 (2.19) | 37 (13.65) |
GGO, ground glass opacity
Fig. 2CT findings (continuous variables) of latent classes identified
Fig. 3CT findings (categorical variables) of lung segments of latent classes identified
Clinical characteristics of latent classes analysis
| Characteristic | Class 1 ( | Class 2 ( | |
|---|---|---|---|
| Sex, | 0.485 | ||
| Male | 114 (50.00) | 144 (53.14) | |
| Female | 114 (50.00) | 127 (46.86) | |
| Age, mean (SD), years | 53.90 ± 15.07 | 61.12 ± 12.52 | < 0.001 |
| BMI, mean (SD), kg/m2 | 22.76 ± 3.00 | 22.61 ± 3.29 | 0.595 |
| Clinical type, | < 0.001 | ||
| Moderate | 193 (84.65) | 166 (61.25) | |
| Severe | 35 (15.35) | 105 (38.75) | |
| Initial nucleic acid test, | 0.789 | ||
| Negative | 13 (5.70) | 17 (6.27) | |
| Positive | 215 (94.30) | 254 (93.73) | |
| Outcomes, | < 0.001 | ||
| Recovery | 212 (92.98) | 210 (77.49) | |
| Therapy | 16 (7.02) | 53 (19.56) | |
| Death | 0 | 8 (2.95) | |
| Fever, | < 0.001 | ||
| No | 46 (20.18) | 26 (9.59) | |
| Yes | 182 (79.82) | 245 (90.41) | |
| Cough, | 0.249 | ||
| No | 57 (25.00) | 56 (20.66) | |
| Yes | 171 (75.00) | 215 (79.34) | |
| Myalgia or arthralgia, | 0.172 | ||
| No | 140 (61.40) | 150 (55.35) | |
| Yes | 88 (38.60) | 121 (44.65) | |
| Headache, | 0.973 | ||
| No | 222 (97.37) | 264 (97.42) | |
| Yes | 6 (2.63) | 7 (2.58) | |
| Nausea or vomiting, | 0.831 | ||
| No | 225 (98.68) | 268 (98.89) | |
| Yes | 3 (1.32) | 3 (1.11) | |
| Diarrhea, | 0.849 | ||
| No | 213 (93.42) | 252 (92.99) | |
| Yes | 15 (6.58) | 19 (7.01) | |
| Abdominal pain, | 0.039 | ||
| No | 228 (100.00) | 266 (98.15) | |
| Yes | 0 (0.00) | 5 (1.85) | |
| Smoking history, | 0.140 | ||
| No | 217 (95.18) | 249 (91.88) | |
| Yes | 11 (4.82) | 22 (8.12) | |
| Cardiovascular disease, | 0.884 | ||
| No | 207 (90.79) | 245 (90.41) | |
| Yes | 21 (9.21) | 26 (9.59) | |
| Diabetes, | 0.079 | ||
| No | 209 (91.67) | 235 (86.72) | |
| Yes | 19 (8.33) | 36 (13.28) | |
| Hypertension, | 0.006 | ||
| No | 173 (75.88) | 175 (64.58) | |
| Yes | 55 (24.12) | 96 (35.42) | |
| COPD, | 0.902 | ||
| No | 227 (99.56) | 270 (99.63) | |
| Yes | 1 (0.44) | 1 (0.37) | |
| Chronic liver disease, | 0.987 | ||
| No | 223 (97.81) | 265 (97.79) | |
| Yes | 5 (2.19) | 6 (2.21) | |
| Chronic renal disease, | 0.540 | ||
| No | 224 (98.25) | 268 (98.89) | |
| Yes | 4 (1.75) | 3 (1.11) | |
| Malignant tumor, | 0.596 | ||
| No | 223 (97.81) | 263 (97.05) | |
| Yes | 5 (2.19) | 8 (2.95) | |
| WBC count, | 0.067 | ||
| Decreased | 27 (11.84) | 19 (7.01) | |
| Normal | 191 (83.77) | 231 (85.24) | |
| Increased | 10 (4.39) | 21 (7.75) | |
| Lymphocyte count, | < 0.001 | ||
| Increased | 6 (2.63) | 2 (0.74) | |
| Normal | 165 (72.37) | 123 (45.39) | |
| Decreased | 57 (25.00) | 146 (53.87) | |
| CRP, | < 0.001 | ||
| Normal | 156 (68.42) | 87 (32.10) | |
| Increased | 72 (31.58) | 184 (67.90) |
BMI body mass index, WBC white blood cell, CRP C-reactive protein, OR odds ratio, CI confidence interval, COPD chronic obstructive pulmonary disease
The result of univariate analysis
| Variables | Statistics | OR (95% CI) | |
|---|---|---|---|
| Sex, | |||
| Male | 258 (51.70) | 1.0 (reference) | |
| Female | 241 (48.30) | 0.88 (0.62, 1.25) | 0.485 |
| Age, mean (SD), years | 57.82 ± 14.19 | 1.04 (1.02, 1.05) | < 0.0001 |
| Age, | |||
| < 60 year | 248 (49.70) | 1.0 (reference) | |
| ≥ 60 year | 251 (50.30) | 2.17 (1.52, 3.11) | < 0.0001 |
| BMI, mean (SD), kg/m2 | 22.68 ± 3.16 | 0.98 (0.93, 1.04) | 0.594 |
| BMI, | |||
| < 23 kg/m2 | 248 (49.70) | 1.0 (reference) | |
| ≥ 23 kg/m2 | 251 (50.30) | 0.96 (0.67, 1.36) | 0.813 |
| Clinical type, | |||
| Moderate | 359 (71.94) | 1.0 (reference) | |
| Severe | 140 (28.06) | 3.49 (2.26, 5.39) | < 0.0001 |
| Initial nucleic acid test, | |||
| Negative | 30 (6.01) | 1.0 (reference) | |
| Positive | 469 (93.99) | 0.90 (0.43, 1.90) | 0.789 |
| Outcomes, | |||
| Recovery | 422 (84.57) | 1.0 (reference) | |
| Therapy | 69 (13.83) | 3.34 (1.85, 6.04) | < 0.0001 |
| Death | 8 (1.60) | – | – |
| Fever, | |||
| No | 72 (14.43) | 1.0 (reference) | |
| Yes | 427 (85.57) | 2.38 (1.42, 4.00) | 0.001 |
| Cough, | |||
| No | 113 (22.65) | 1.0 (reference) | |
| Yes | 386 (77.35) | 1.28 (0.84, 1.95) | 0.250 |
| Myalgia or arthralgia, | |||
| No | 290 (58.12) | 1.0 (reference) | |
| Yes | 209 (41.88) | 1.28 (0.90, 1.84) | 0.173 |
| Headache, | |||
| No | 486 (97.39) | 1.0 (reference) | |
| Yes | 13 (2.61) | 0.98 (0.32, 2.96) | 0.973 |
| Nausea or vomiting, | |||
| No | 493 (98.80) | 1.0 (reference) | |
| Yes | 6 (1.20) | 0.84 (0.17, 4.20) | 0.831 |
| Diarrhea, | |||
| No | 465 (93.19) | 1.0 (reference) | |
| Yes | 34 (6.81) | 1.07 (0.53, 2.16) | 0.849 |
| Abdominal pain, | |||
| No | 494 (99.00) | 1.0 (reference) | |
| Yes | 5 (1.00) | – | 0.981 |
| Smoking history, | |||
| No | 466 (93.39) | 1.0 (reference) | |
| Yes | 33 (6.61) | 1.74 (0.83, 3.68) | 0.145 |
| Cardiovascular disease, | |||
| No | 452 (90.58) | 1.0 (reference) | |
| Yes | 47 (9.42) | 1.05 (0.57, 1.91) | 0.884 |
| Diabetes, | |||
| No | 444 (88.98) | 1.0 (reference) | |
| Yes | 55 (11.02) | 1.69 (0.94, 3.03) | 0.081 |
| Hypertension, | |||
| No | 348 (69.74) | 1.0 (reference) | |
| Yes | 151 (30.26) | 1.73 (1.17, 2.55) | 0.006 |
| COPD, | |||
| No | 497 (99.60) | 1.0 (reference) | |
| Yes | 2 (0.40) | 0.84 (0.05, 13.52) | 0.903 |
| Chronic liver disease, | |||
| No | 488 (97.80) | 1.0 (reference) | |
| Yes | 11 (2.20) | 1.01 (0.30, 3.35) | 0.987 |
| Chronic renal disease, | |||
| No | 492 (98.60) | 1.0 (reference) | |
| Yes | 7 (1.40) | 0.63 (0.14, 2.83) | 0.544 |
| Malignant tumor, | |||
| No | 486 (97.39) | 1.0 (reference) | |
| Yes | 13 (2.61) | 1.36 (0.44, 4.21) | 0.597 |
| WBC count, | |||
| Decreased | 46 (9.22) | 1.0 (reference) | |
| Normal | 422 (84.57) | 1.72 (0.93, 3.19) | 0.086 |
| Increased | 31 (6.21) | 2.98 (1.15, 7.75) | 0.025 |
| Lymphocyte count, | |||
| Increased | 8 (1.60) | 1.0 (reference) | |
| Normal | 288 (57.72) | 2.24 (0.44, 11.27) | 0.329 |
| Decreased | 203 (40.68) | 7.68 (1.51, 39.19) | 0.014 |
| CRP, | |||
| Normal | 243 (48.70) | 1.0 (reference) | |
| Increased | 256 (51.30) | 4.58 (3.14, 6.69) | < 0.0001 |
BMI body mass index, WBC white blood cell, CRP C-reactive protein, OR odds ratio, CI confidence interval, COPD chronic obstructive pulmonary disease
Fig. 4a–c Chest CT findings of a 34-year-old man with moderate COVID-19 pneumonia a CT image of lung parenchyma showed multi-focal crazy-paving pattern and consolidation peripherally distributed in the superior lobes of both lungs. b The lesions were automatically labeled by artificial intelligence software. c Three-dimensional volume-rendered reconstruction showed the extent of crazy-paving pattern and consolidation with scattered pattern. d–f Chest CT of a 68-year-old man with severe COVID-19 pneumonia. d CT image of lung parenchyma showed multi-focal GGO and consolidation diffusely distributed in the middle and inferior lobes of the right lung and of inferior lobe of the left lung. e The lesions were automatically labeled by artificial intelligence software. f Three-dimensional volume-rendered reconstruction showed the extent of the crazy-paving pattern and consolidation with a scattered pattern. GGO, ground glass opacity
Relationship between the clinical types and LCA-derived subgroups
| Variable | Model 1 | Model 2 | Model 3 | |||
|---|---|---|---|---|---|---|
| OR (95% CI) | OR (95% CI) | OR (95% CI) | ||||
| Clinical types | ||||||
| Moderate | 1.0 (reference) | 1.0 (reference) | 1.0 (reference) | |||
| Sever | 3.49 (2.26, 5.39) | < 0.0001 | 3.01 (1.92, 4.70) | < 0.0001 | 1.97 (1.09, 3.54) | 0.025 |
OR odds ratio, CI confidence, LCA latent class analysis
Model 1: we did not adjust other co-variants
Model 2: we adjusted age, sex, and body mass index
Model 3: we further adjusted outcomes, fever, hypertension, lymphocyte count, C-reactive protein