Literature DB >> 32468220

Glaciimonas soli sp. nov., a soil bacterium isolated from the forest of a high elevation mountain.

Wei-Sheng Huang1, Li-Ting Wang2, Jun-Ning Sun1, Jwo-Sheng Chen3, Ssu-Po Huang1, Shih-Ting Lin2, Lina Huang2, Wung Yang Shieh4.   

Abstract

A Gram-negative, psychrophilic bacterium, designated strain GS1T, was isolated from a forest soil sample collected from the West Peak of Mt. Yushan, Yushan National Park, Taiwan. Cells grown in broth cultures were mostly non-motile and non-flagellated, whereas motile cells with monotrichous, subpolar flagella were also observed. The novel strain grew over a temperature range of 4-25 °C with optimum growth at 10-15 °C. It grew aerobically and was not capable of anaerobic growth by fermentation of D-glucose or other carbohydrates. Ubiquinone 8 was the predominant isoprenoid quinone. The major polar lipids comprised phosphatidylethanolamine, diphosphatidylglycerol and dimethylaminoethanol. Cellular fatty acids were dominated by C16:1ω7c (35.2%), C16:0 (19.5%), C18:1ω7c (18.8%) and C17:0ω7c cyclo (15.5%). The DNA G + C content was 49.2 mol% evaluated according to the genomic sequencing data. Strain GS1T shared more than 96.5% 16S rRNA gene sequence similarities with type strains of four Collimonas species (97.2-97.5%), three Glaciimonas species (97.3% for each of the three) and Oxalicibacterium solurbis (96.5%). Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain GS1T formed a stable genus-level clade with type strains of species in the genus Glaciimonas in the family Oxalobacteraceae and GS1T was an outgroup with respect to these Glaciimonas species. Characteristically, strain GS1T could be easily distinguished from the recognised Glaciimonas species by exhibition of swimming motility with monotrichous, subpolar flagellum in some of the cells, ability to grow in NaCl at 2% but not at 3% and the distinguishable fatty acid profiles. On the basis of the polyphasic taxonomic data from this study, strain GS1T is considered to represent a novel species of the genus Glaciimonas, for which the name Glaciimonas soli sp. nov. is proposed. The type strain is GS1T (= JCM 33275T = BCRC 81091T).

Entities:  

Keywords:  Betaproteobacteria; Glaciimonas soli; Oxalobacteraceae; Psychrophilic bacteria; Soil bacteria; Yushania niitakayamensis

Year:  2020        PMID: 32468220     DOI: 10.1007/s10482-020-01428-z

Source DB:  PubMed          Journal:  Antonie Van Leeuwenhoek        ISSN: 0003-6072            Impact factor:   2.271


  10 in total

1.  Microbial communities and bacterial diversity of spruce, hemlock and grassland soils of Tatachia Forest, Taiwan.

Authors:  Ammaiyappan Selvam; Shu-Hsien Tsai; Ching-Piao Liu; I-Chu Chen; Cheng-Hsiung Chang; Shang-Shyng Yang
Journal:  J Environ Sci Health B       Date:  2010-07       Impact factor: 1.990

2.  Seasonal variation of microbial ecology in hemlock soil of Tatachia Mountain, Taiwan.

Authors:  Shang Shyng Yang; Shu Hsien Tsai; Hsiao Yun Fan; Chiun Kai Yang; Wei Lan Hung; Shine Tsern Cho
Journal:  J Microbiol Immunol Infect       Date:  2006-06       Impact factor: 4.399

3.  Zobellella denitrificans gen. nov., sp. nov. and Zobellella taiwanensis sp. nov., denitrifying bacteria capable of fermentative metabolism.

Authors:  Yu-Te Lin; Wung Yang Shieh
Journal:  Int J Syst Evol Microbiol       Date:  2006-06       Impact factor: 2.747

4.  Glaciimonas alpina sp. nov. isolated from alpine glaciers and reclassification of Glaciimonas immobilis Cr9-12 as the type strain of Glaciimonas alpina sp. nov.

Authors:  David Frasson; Matije Udovičić; Beat Frey; Aleš Lapanje; De-Chao Zhang; Rosa Margesin; Martin Sievers
Journal:  Int J Syst Evol Microbiol       Date:  2015-06       Impact factor: 2.747

5.  A note on the separation of natural mixtures of bacterial ubiquinones using reverse-phase partition thin-layer chromatography and high performance liquid chromatography.

Authors:  M D Collins; D Jones
Journal:  J Appl Bacteriol       Date:  1981-08

6.  Glaciimonas immobilis gen. nov., sp. nov., a member of the family Oxalobacteraceae isolated from alpine glacier cryoconite.

Authors:  De-Chao Zhang; Mersiha Redzic; Franz Schinner; Rosa Margesin
Journal:  Int J Syst Evol Microbiol       Date:  2010-10-08       Impact factor: 2.747

7.  Seasonal variation of microbial populations and biomass in Tatachia grassland soils of Taiwan.

Authors:  Shine-Tsern Cho; Shu-Hsien Tsai; Anita Ravindran; Ammaiyappan Selvam; Shang-Shyng Yang
Journal:  Environ Geochem Health       Date:  2008-06       Impact factor: 4.609

8.  Pseudidiomarina taiwanensis gen. nov., sp. nov., a marine bacterium isolated from shallow coastal water of An-Ping Harbour, Taiwan, and emended description of the family Idiomarinaceae.

Authors:  Wen Dar Jean; Wung Yang Shieh; Hsiu-Hui Chiu
Journal:  Int J Syst Evol Microbiol       Date:  2006-04       Impact factor: 2.747

9.  Glaciimonas frigoris sp. nov., a psychrophilic bacterium isolated from ancient Siberian permafrost sediment, and emended description of the genus Glaciimonas.

Authors:  Rosa Margesin; De-Chao Zhang; David Frasson; Anatoli Brouchkov
Journal:  Int J Syst Evol Microbiol       Date:  2015-11-23       Impact factor: 2.747

10.  Glaciimonas singularis sp. nov., isolated from a uranium mine wastewater treatment plant.

Authors:  Ana Paula Chung; Igor Tiago; M Fernanda Nobre; António Veríssimo; Paula V Morais
Journal:  Int J Syst Evol Microbiol       Date:  2012-11-23       Impact factor: 2.747

  10 in total

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