Literature DB >> 32463230

Quantum Mechanics-Based Structure Analysis of Cyclic Monoterpene Glycosides from Rhodiola rosea.

Yu Tang, J Brent Friesen1, David C Lankin, James B McAlpine, Dejan S Nikolić, Matthias Niemitz2, David S Seigler3, James G Graham, Shao-Nong Chen, Guido F Pauli.   

Abstract

NMR- and MS-guided metabolomic mining for new phytoconstituents from a widely used dietary supplement, Rhodiola rosea, yielded two new (+)-myrtenol glycosides, 1 and 2, and two new cuminol glycosides, 3 and 4, along with three known analogues, 5-7. The structures of the new compounds were determined by extensive spectroscopic data analysis. Quantum mechanics-driven 1H iterative full spin analysis (QM-HiFSA) decoded the spatial arrangement of the methyl groups in 1 and 2, as well as other features not recognizable by conventional methods, including higher order spin-coupling effects. Expanding applied HiFSA methodology to monoterpene glycosides advances the toolbox for stereochemical assignments, facilitates their structural dereplication, and provides a more definitive reference point for future phytochemical and biological studies of R. rosea as a resilience botanical. Application of a new NMR data analysis software package, CT, for QM-based iteration of NMR spectra is also discussed.

Entities:  

Year:  2020        PMID: 32463230      PMCID: PMC7384765          DOI: 10.1021/acs.jnatprod.0c00212

Source DB:  PubMed          Journal:  J Nat Prod        ISSN: 0163-3864            Impact factor:   4.050


  18 in total

Review 1.  Rhodiola species: A comprehensive review of traditional use, phytochemistry, pharmacology, toxicity, and clinical study.

Authors:  Hongxun Tao; Xu Wu; Jiliang Cao; Yu Peng; Anqi Wang; Jin Pei; Jianbo Xiao; Shengpeng Wang; Yitao Wang
Journal:  Med Res Rev       Date:  2019-01-16       Impact factor: 12.944

2.  A routine experimental protocol for qHNMR illustrated with Taxol.

Authors:  Guido F Pauli; Birgit U Jaki; David C Lankin
Journal:  J Nat Prod       Date:  2007-02-14       Impact factor: 4.050

3.  Bioactive constituents of Chinese natural medicines. IV. Rhodiolae radix. (2).: On the histamine release inhibitors from the underground part of Rhodiola sacra (Prain ex Hamet) S. H. Fu (Crassulaceae): chemical structures of rhodiocyanoside D and sacranosides A and B.

Authors:  M Yoshikawa; H Shimada; S Horikawa; T Murakami; H Shimoda; J Yamahara; H Matsuda
Journal:  Chem Pharm Bull (Tokyo)       Date:  1997-09       Impact factor: 1.645

4.  Quantification of a botanical negative marker without an identical standard: ginkgotoxin in Ginkgo biloba.

Authors:  Yang Liu; Shao-Nong Chen; James B McAlpine; Larry L Klein; J Brent Friesen; David C Lankin; Guido F Pauli
Journal:  J Nat Prod       Date:  2014-01-16       Impact factor: 4.050

5.  Inhibitory effects of perillosides A and C, and related monoterpene glucosides on aldose reductase and their structure-activity relationships.

Authors:  T Fujita; K Ohira; K Miyatake; Y Nakano; M Nakayama
Journal:  Chem Pharm Bull (Tokyo)       Date:  1995-06       Impact factor: 1.645

6.  Subtle Chemical Shifts Explain the NMR Fingerprints of Oligomeric Proanthocyanidins with High Dentin Biomodification Potency.

Authors:  Joo-Won Nam; Rasika S Phansalkar; David C Lankin; Jonathan Bisson; James B McAlpine; Ariene A Leme; Cristina M P Vidal; Benjamin Ramirez; Matthias Niemitz; Ana Bedran-Russo; Shao-Nong Chen; Guido F Pauli
Journal:  J Org Chem       Date:  2015-07-27       Impact factor: 4.354

Review 7.  Importance of purity evaluation and the potential of quantitative ¹H NMR as a purity assay.

Authors:  Guido F Pauli; Shao-Nong Chen; Charlotte Simmler; David C Lankin; Tanja Gödecke; Birgit U Jaki; J Brent Friesen; James B McAlpine; José G Napolitano
Journal:  J Med Chem       Date:  2014-10-08       Impact factor: 7.446

8.  Residual Complexity Does Impact Organic Chemistry and Drug Discovery: The Case of Rufomyazine and Rufomycin.

Authors:  Mary P Choules; Larry L Klein; David C Lankin; James B McAlpine; Sang-Hyun Cho; Jinhua Cheng; Hanki Lee; Joo-Won Suh; Birgit U Jaki; Scott G Franzblau; Guido F Pauli
Journal:  J Org Chem       Date:  2018-05-24       Impact factor: 4.354

9.  Essential parameters for structural analysis and dereplication by (1)H NMR spectroscopy.

Authors:  Guido F Pauli; Shao-Nong Chen; David C Lankin; Jonathan Bisson; Ryan J Case; Lucas R Chadwick; Tanja Gödecke; Taichi Inui; Aleksej Krunic; Birgit U Jaki; James B McAlpine; Shunyan Mo; José G Napolitano; Jimmy Orjala; Juuso Lehtivarjo; Samuli-Petrus Korhonen; Matthias Niemitz
Journal:  J Nat Prod       Date:  2014-06-04       Impact factor: 4.050

10.  Toward Structural Correctness: Aquatolide and the Importance of 1D Proton NMR FID Archiving.

Authors:  Guido F Pauli; Matthias Niemitz; Jonathan Bisson; Michael W Lodewyk; Cristian Soldi; Jared T Shaw; Dean J Tantillo; Jordy M Saya; Klaas Vos; Roel A Kleinnijenhuis; Henk Hiemstra; Shao-Nong Chen; James B McAlpine; David C Lankin; J Brent Friesen
Journal:  J Org Chem       Date:  2016-01-26       Impact factor: 4.354

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  3 in total

1.  Response to Letter to the Editor regarding "Comparison of phytochemical composition of Ginkgo biloba extracts using a combination of non-targeted and targeted analytical approaches".

Authors:  Bradley J Collins; Season Kerns; Kristin Aillon; Geoffrey Mueller; Cynthia V Rider; Eugene F DeRose; Robert E London; James Harnly; Suramya Waidyanatha
Journal:  Anal Bioanal Chem       Date:  2021-10-24       Impact factor: 4.142

2.  Tandem of Countercurrent Separation and qHNMR Enables Gravimetric Analyses: Absolute Quantitation of the Rhodiola rosea Metabolome.

Authors:  Yu Tang; J Brent Friesen; Dejan S Nikolić; David C Lankin; James B McAlpine; Shao-Nong Chen; Guido F Pauli
Journal:  Anal Chem       Date:  2021-08-16       Impact factor: 8.008

3.  Silica Gel-mediated Oxidation of Prenyl Motifs Generates Natural Product-Like Artifacts.

Authors:  Yu Tang; J Brent Friesen; Dejan S Nikolić; David C Lankin; James B McAlpine; Shao-Nong Chen; Guido F Pauli
Journal:  Planta Med       Date:  2021-05-11       Impact factor: 3.007

  3 in total

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