Literature DB >> 32452262

Challenges to optimizing RNA nanostructures for large scale production and controlled therapeutic properties.

Morgan Chandler1, Martin Panigaj2, Lewis A Rolband1, Kirill A Afonin1.   

Abstract

Nucleic acids have been utilized to construct an expansive collection of nanoarchitectures varying in design, physicochemical properties, cellular processing and biomedical applications. However, the broader therapeutic adaptation of nucleic acid nanoassemblies in general, and RNA-based nanoparticles in particular, have faced several challenges in moving towards (pre)clinical settings. For one, the large-batch synthesis of nucleic acids is still under development, with multi-stranded and chemically modified assemblies requiring greater production capacity while maintaining consistent medical-grade outputs. Furthermore, the unknown immunostimulation by these nanomaterials poses additional challenges, necessary to be overcome for optimizing future development of clinically approved RNA nanoparticles.

Keywords:  NANPs; RNA nanoparticles; RNA nanotechnology; TNAs; immune stimulation; nanoparticles; self-assembly

Year:  2020        PMID: 32452262      PMCID: PMC7304434          DOI: 10.2217/nnm-2020-0034

Source DB:  PubMed          Journal:  Nanomedicine (Lond)        ISSN: 1743-5889            Impact factor:   5.307


  64 in total

1.  A logic-gated nanorobot for targeted transport of molecular payloads.

Authors:  Shawn M Douglas; Ido Bachelet; George M Church
Journal:  Science       Date:  2012-02-17       Impact factor: 47.728

2.  Detection of Endotoxin in Nano-formulations Using Limulus Amoebocyte Lysate (LAL) Assays.

Authors:  Barry W Neun; Marina A Dobrovolskaia
Journal:  J Vis Exp       Date:  2019-01-30       Impact factor: 1.355

3.  Preparation of a Conditional RNA Switch.

Authors:  Paul Zakrevsky; Lorena Parlea; Mathias Viard; Eckart Bindewald; Kirill A Afonin; Bruce A Shapiro
Journal:  Methods Mol Biol       Date:  2017

4.  Magnetic nanoparticles loaded with functional RNA nanoparticles.

Authors:  Melissa Cruz-Acuña; Justin R Halman; Kirill A Afonin; Jon Dobson; Carlos Rinaldi
Journal:  Nanoscale       Date:  2018-09-27       Impact factor: 7.790

Review 5.  Innate immune responses triggered by nucleic acids inspire the design of immunomodulatory nucleic acid nanoparticles (NANPs).

Authors:  Morgan Chandler; Morgan Brittany Johnson; Martin Panigaj; Kirill A Afonin
Journal:  Curr Opin Biotechnol       Date:  2019-11-25       Impact factor: 9.740

Review 6.  Smart-Responsive Nucleic Acid Nanoparticles (NANPs) with the Potential to Modulate Immune Behavior.

Authors:  Morgan Chandler; Kirill A Afonin
Journal:  Nanomaterials (Basel)       Date:  2019-04-12       Impact factor: 5.076

7.  Optimization of the Split-Spinach Aptamer for Monitoring Nanoparticle Assembly Involving Multiple Contiguous RNAs.

Authors:  Jack M O'Hara; Dylan Marashi; Sean Morton; Luc Jaeger; Wade W Grabow
Journal:  Nanomaterials (Basel)       Date:  2019-03-06       Impact factor: 5.076

Review 8.  Improved Nucleic Acid Therapy with Advanced Nanoscale Biotechnology.

Authors:  Yuhua Weng; Qianqian Huang; Chunhui Li; Yongfeng Yang; Xiaoxia Wang; Jie Yu; Yuanyu Huang; Xing-Jie Liang
Journal:  Mol Ther Nucleic Acids       Date:  2019-12-17       Impact factor: 8.886

9.  Co-transcriptional production of RNA-DNA hybrids for simultaneous release of multiple split functionalities.

Authors:  Kirill A Afonin; Ravi Desai; Mathias Viard; Maria L Kireeva; Eckart Bindewald; Christopher L Case; Anna E Maciag; Wojciech K Kasprzak; Taejin Kim; Alison Sappe; Marissa Stepler; Vineet N Kewalramani; Mikhail Kashlev; Robert Blumenthal; Bruce A Shapiro
Journal:  Nucleic Acids Res       Date:  2013-11-04       Impact factor: 16.971

10.  Preclinical Development of a Subcutaneous ALAS1 RNAi Therapeutic for Treatment of Hepatic Porphyrias Using Circulating RNA Quantification.

Authors:  Amy Chan; Abigail Liebow; Makiko Yasuda; Lin Gan; Tim Racie; Martin Maier; Satya Kuchimanchi; Don Foster; Stuart Milstein; Klaus Charisse; Alfica Sehgal; Muthiah Manoharan; Rachel Meyers; Kevin Fitzgerald; Amy Simon; Robert J Desnick; William Querbes
Journal:  Mol Ther Nucleic Acids       Date:  2015-11-03       Impact factor: 10.183

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  10 in total

1.  Anhydrous Nucleic Acid Nanoparticles for Storage and Handling at Broad Range of Temperatures.

Authors:  Allison N Tran; Morgan Chandler; Justin Halman; Damian Beasock; Adam Fessler; Riley Q McKeough; Phuong Anh Lam; Daniel P Furr; Jian Wang; Edward Cedrone; Marina A Dobrovolskaia; Nikolay V Dokholyan; Susan R Trammell; Kirill A Afonin
Journal:  Small       Date:  2022-02-06       Impact factor: 13.281

2.  The International Society of RNA Nanotechnology and Nanomedicine (ISRNN): The Present and Future of the Burgeoning Field.

Authors:  Morgan Chandler; Brittany Johnson; Emil Khisamutdinov; Marina A Dobrovolskaia; Joanna Sztuba-Solinska; Aliasger K Salem; Koen Breyne; Roger Chammas; Nils G Walter; Lydia M Contreras; Peixuan Guo; Kirill A Afonin
Journal:  ACS Nano       Date:  2021-10-22       Impact factor: 18.027

Review 3.  The dynamic, motile and deformative properties of RNA nanoparticles facilitate the third milestone of drug development.

Authors:  Xin Li; Abhjeet S Bhullar; Daniel W Binzel; Peixuan Guo
Journal:  Adv Drug Deliv Rev       Date:  2022-05-05       Impact factor: 17.873

4.  The immunorecognition, subcellular compartmentalization, and physicochemical properties of nucleic acid nanoparticles can be controlled by composition modification.

Authors:  Morgan Brittany Johnson; Justin R Halman; Daniel K Miller; Joseph S Cooper; Emil F Khisamutdinov; Ian Marriott; Kirill A Afonin
Journal:  Nucleic Acids Res       Date:  2020-11-18       Impact factor: 16.971

Review 5.  Exosomes as natural delivery carriers for programmable therapeutic nucleic acid nanoparticles (NANPs).

Authors:  Weina Ke; Kirill A Afonin
Journal:  Adv Drug Deliv Rev       Date:  2021-06-16       Impact factor: 17.873

Review 6.  Nucleic acid nanoparticles (NANPs) as molecular tools to direct desirable and avoid undesirable immunological effects.

Authors:  M Brittany Johnson; Morgan Chandler; Kirill A Afonin
Journal:  Adv Drug Deliv Rev       Date:  2021-04-20       Impact factor: 17.873

Review 7.  Drug delivery systems for RNA therapeutics.

Authors:  Kalina Paunovska; David Loughrey; James E Dahlman
Journal:  Nat Rev Genet       Date:  2022-01-04       Impact factor: 59.581

Review 8.  Application of Nucleic Acid Frameworks in the Construction of Nanostructures and Cascade Biocatalysts: Recent Progress and Perspective.

Authors:  Gan Zhu; Ping Song; Jing Wu; Minglan Luo; Zhipeng Chen; Tingjian Chen
Journal:  Front Bioeng Biotechnol       Date:  2022-01-07

Review 9.  Critical review of nucleic acid nanotechnology to identify gaps and inform a strategy for accelerated clinical translation.

Authors:  Kirill A Afonin; Marina A Dobrovolskaia; Weina Ke; Piotr Grodzinski; Mark Bathe
Journal:  Adv Drug Deliv Rev       Date:  2021-12-13       Impact factor: 17.873

10.  Sodium and Magnesium Ion Location at the Backbone and at the Nucleobase of RNA: Ab Initio Molecular Dynamics in Water Solution.

Authors:  Stefan K Kolev; Petko St Petkov; Teodor I Milenov; Georgi N Vayssilov
Journal:  ACS Omega       Date:  2022-06-23
  10 in total

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