Literature DB >> 32435328

A selective overview of feature screening methods with applications to neuroimaging data.

Kevin He1, Han Xu2, Jian Kang1.   

Abstract

In neuroimaging studies, regression models are frequently used to identify the association of the imaging features and clinical outcome, where the number of imaging features (e.g., hundreds of thousands of voxel-level predictors) much outweighs the number of subjects in the studies. Classical best subset selection or penalized variable selection methods that perform well for low- or moderate-dimensional data do not scale to ultrahigh-dimensional neuroimaging data. To reduce the dimensionality, variable screening has emerged as a powerful tool for feature selection in neuroimaging studies. We present a selective review of the recent developments in ultrahigh-dimensional variable screening, with a focus on their practical performance on the analysis of neuroimaging data with complex spatial correlation structures and high-dimensionality. We conduct extensive simulation studies to compare the performance on selection accuracy and computational costs between the different methods. We present analyses of resting-state functional magnetic resonance imaging data in the Autism Brain Imaging Data Exchange study. This article is categorized under: Applications of Computational Statistics > Computational and Molecular BiologyStatistical Learning and Exploratory Methods of the Data Sciences > Image Data MiningStatistical and Graphical Methods of Data Analysis > Analysis of High Dimensional Data.

Entities:  

Keywords:  correlated covariates; imaging data analysis; linear regression; variable screening

Year:  2018        PMID: 32435328      PMCID: PMC7238974          DOI: 10.1002/wics.1454

Source DB:  PubMed          Journal:  Wiley Interdiscip Rev Comput Stat        ISSN: 1939-0068


  12 in total

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Authors:  N Tzourio-Mazoyer; B Landeau; D Papathanassiou; F Crivello; O Etard; N Delcroix; B Mazoyer; M Joliot
Journal:  Neuroimage       Date:  2002-01       Impact factor: 6.556

2.  Nonparametric Independence Screening in Sparse Ultra-High Dimensional Additive Models.

Authors:  Jianqing Fan; Yang Feng; Rui Song
Journal:  J Am Stat Assoc       Date:  2011-06       Impact factor: 5.033

3.  Score test variable screening.

Authors:  Sihai Dave Zhao; Yi Li
Journal:  Biometrics       Date:  2014-08-14       Impact factor: 2.571

4.  Model-Free Feature Screening for Ultrahigh Dimensional Discriminant Analysis.

Authors:  Hengjian Cui; Runze Li; Wei Zhong
Journal:  J Am Stat Assoc       Date:  2015-06-01       Impact factor: 5.033

5.  Conditional Sure Independence Screening.

Authors:  Emre Barut; Jianqing Fan; Anneleen Verhasselt
Journal:  J Am Stat Assoc       Date:  2016-10-18       Impact factor: 5.033

6.  Ultrahigh dimensional feature selection: beyond the linear model.

Authors:  Jianqing Fan; Richard Samworth; Yichao Wu
Journal:  J Mach Learn Res       Date:  2009       Impact factor: 3.654

7.  Conditional screening for ultra-high dimensional covariates with survival outcomes.

Authors:  Hyokyoung G Hong; Jian Kang; Yi Li
Journal:  Lifetime Data Anal       Date:  2016-12-08       Impact factor: 1.588

8.  Model-Free Feature Screening for Ultrahigh Dimensional Data.

Authors:  Liping Zhu; Lexin Li; Runze Li; Lixing Zhu
Journal:  J Am Stat Assoc       Date:  2012-01-24       Impact factor: 5.033

9.  Partition-based ultrahigh-dimensional variable screening.

Authors:  Jian Kang; Hyokyoung G Hong; Y I Li
Journal:  Biometrika       Date:  2017-10-09       Impact factor: 2.445

10.  The autism brain imaging data exchange: towards a large-scale evaluation of the intrinsic brain architecture in autism.

Authors:  A Di Martino; C-G Yan; Q Li; E Denio; F X Castellanos; K Alaerts; J S Anderson; M Assaf; S Y Bookheimer; M Dapretto; B Deen; S Delmonte; I Dinstein; B Ertl-Wagner; D A Fair; L Gallagher; D P Kennedy; C L Keown; C Keysers; J E Lainhart; C Lord; B Luna; V Menon; N J Minshew; C S Monk; S Mueller; R-A Müller; M B Nebel; J T Nigg; K O'Hearn; K A Pelphrey; S J Peltier; J D Rudie; S Sunaert; M Thioux; J M Tyszka; L Q Uddin; J S Verhoeven; N Wenderoth; J L Wiggins; S H Mostofsky; M P Milham
Journal:  Mol Psychiatry       Date:  2013-06-18       Impact factor: 15.992

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  1 in total

1.  Lessons from the Criticality of the Spanish High Capacity Road Network on Direct, Representative Democracies and Technocracies.

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Journal:  Appl Spat Anal Policy       Date:  2022-06-20
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