Literature DB >> 32433631

Neuroimaging results altered by varying analysis pipelines.

Martin Lindquist.   

Abstract

Entities:  

Keywords:  Human behaviour; Imaging; Neuroscience; Research data

Mesh:

Year:  2020        PMID: 32433631     DOI: 10.1038/d41586-020-01282-z

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   69.504


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  7 in total

1.  The quantitative evaluation of functional neuroimaging experiments: the NPAIRS data analysis framework.

Authors:  Stephen C Strother; Jon Anderson; Lars Kai Hansen; Ulrik Kjems; Rafal Kustra; John Sidtis; Sally Frutiger; Suraj Muley; Stephen LaConte; David Rottenberg
Journal:  Neuroimage       Date:  2002-04       Impact factor: 6.556

2.  False-positive psychology: undisclosed flexibility in data collection and analysis allows presenting anything as significant.

Authors:  Joseph P Simmons; Leif D Nelson; Uri Simonsohn
Journal:  Psychol Sci       Date:  2011-10-17

3.  Optimizing preprocessing and analysis pipelines for single-subject fMRI. I. Standard temporal motion and physiological noise correction methods.

Authors:  Nathan W Churchill; Anita Oder; Hervé Abdi; Fred Tam; Wayne Lee; Christopher Thomas; Jon E Ween; Simon J Graham; Stephen C Strother
Journal:  Hum Brain Mapp       Date:  2011-03-31       Impact factor: 5.038

Review 4.  The secret lives of experiments: methods reporting in the fMRI literature.

Authors:  Joshua Carp
Journal:  Neuroimage       Date:  2012-07-10       Impact factor: 6.556

Review 5.  Building better biomarkers: brain models in translational neuroimaging.

Authors:  Choong-Wan Woo; Luke J Chang; Martin A Lindquist; Tor D Wager
Journal:  Nat Neurosci       Date:  2017-02-23       Impact factor: 24.884

6.  On the plurality of (methodological) worlds: estimating the analytic flexibility of FMRI experiments.

Authors:  Joshua Carp
Journal:  Front Neurosci       Date:  2012-10-11       Impact factor: 4.677

7.  Variability in the analysis of a single neuroimaging dataset by many teams.

Authors:  Rotem Botvinik-Nezer; Felix Holzmeister; Colin F Camerer; Anna Dreber; Juergen Huber; Magnus Johannesson; Michael Kirchler; Roni Iwanir; Jeanette A Mumford; R Alison Adcock; Paolo Avesani; Blazej M Baczkowski; Aahana Bajracharya; Leah Bakst; Sheryl Ball; Marco Barilari; Nadège Bault; Derek Beaton; Julia Beitner; Roland G Benoit; Ruud M W J Berkers; Jamil P Bhanji; Bharat B Biswal; Sebastian Bobadilla-Suarez; Tiago Bortolini; Katherine L Bottenhorn; Alexander Bowring; Senne Braem; Hayley R Brooks; Emily G Brudner; Cristian B Calderon; Julia A Camilleri; Jaime J Castrellon; Luca Cecchetti; Edna C Cieslik; Zachary J Cole; Olivier Collignon; Robert W Cox; William A Cunningham; Stefan Czoschke; Kamalaker Dadi; Charles P Davis; Alberto De Luca; Mauricio R Delgado; Lysia Demetriou; Jeffrey B Dennison; Xin Di; Erin W Dickie; Ekaterina Dobryakova; Claire L Donnat; Juergen Dukart; Niall W Duncan; Joke Durnez; Amr Eed; Simon B Eickhoff; Andrew Erhart; Laura Fontanesi; G Matthew Fricke; Shiguang Fu; Adriana Galván; Remi Gau; Sarah Genon; Tristan Glatard; Enrico Glerean; Jelle J Goeman; Sergej A E Golowin; Carlos González-García; Krzysztof J Gorgolewski; Cheryl L Grady; Mikella A Green; João F Guassi Moreira; Olivia Guest; Shabnam Hakimi; J Paul Hamilton; Roeland Hancock; Giacomo Handjaras; Bronson B Harry; Colin Hawco; Peer Herholz; Gabrielle Herman; Stephan Heunis; Felix Hoffstaedter; Jeremy Hogeveen; Susan Holmes; Chuan-Peng Hu; Scott A Huettel; Matthew E Hughes; Vittorio Iacovella; Alexandru D Iordan; Peder M Isager; Ayse I Isik; Andrew Jahn; Matthew R Johnson; Tom Johnstone; Michael J E Joseph; Anthony C Juliano; Joseph W Kable; Michalis Kassinopoulos; Cemal Koba; Xiang-Zhen Kong; Timothy R Koscik; Nuri Erkut Kucukboyaci; Brice A Kuhl; Sebastian Kupek; Angela R Laird; Claus Lamm; Robert Langner; Nina Lauharatanahirun; Hongmi Lee; Sangil Lee; Alexander Leemans; Andrea Leo; Elise Lesage; Flora Li; Monica Y C Li; Phui Cheng Lim; Evan N Lintz; Schuyler W Liphardt; Annabel B Losecaat Vermeer; Bradley C Love; Michael L Mack; Norberto Malpica; Theo Marins; Camille Maumet; Kelsey McDonald; Joseph T McGuire; Helena Melero; Adriana S Méndez Leal; Benjamin Meyer; Kristin N Meyer; Glad Mihai; Georgios D Mitsis; Jorge Moll; Dylan M Nielson; Gustav Nilsonne; Michael P Notter; Emanuele Olivetti; Adrian I Onicas; Paolo Papale; Kaustubh R Patil; Jonathan E Peelle; Alexandre Pérez; Doris Pischedda; Jean-Baptiste Poline; Yanina Prystauka; Shruti Ray; Patricia A Reuter-Lorenz; Richard C Reynolds; Emiliano Ricciardi; Jenny R Rieck; Anais M Rodriguez-Thompson; Anthony Romyn; Taylor Salo; Gregory R Samanez-Larkin; Emilio Sanz-Morales; Margaret L Schlichting; Douglas H Schultz; Qiang Shen; Margaret A Sheridan; Jennifer A Silvers; Kenny Skagerlund; Alec Smith; David V Smith; Peter Sokol-Hessner; Simon R Steinkamp; Sarah M Tashjian; Bertrand Thirion; John N Thorp; Gustav Tinghög; Loreen Tisdall; Steven H Tompson; Claudio Toro-Serey; Juan Jesus Torre Tresols; Leonardo Tozzi; Vuong Truong; Luca Turella; Anna E van 't Veer; Tom Verguts; Jean M Vettel; Sagana Vijayarajah; Khoi Vo; Matthew B Wall; Wouter D Weeda; Susanne Weis; David J White; David Wisniewski; Alba Xifra-Porxas; Emily A Yearling; Sangsuk Yoon; Rui Yuan; Kenneth S L Yuen; Lei Zhang; Xu Zhang; Joshua E Zosky; Thomas E Nichols; Russell A Poldrack; Tom Schonberg
Journal:  Nature       Date:  2020-05-20       Impact factor: 69.504

  7 in total
  11 in total

1.  Functional connectome of brainstem nuclei involved in autonomic, limbic, pain and sensory processing in living humans from 7 Tesla resting state fMRI.

Authors:  Simone Cauzzo; Kavita Singh; Matthew Stauder; María Guadalupe García-Gomar; Nicola Vanello; Claudio Passino; Jeffrey Staab; Iole Indovina; Marta Bianciardi
Journal:  Neuroimage       Date:  2022-01-21       Impact factor: 6.556

2.  Recovery of neural dynamics criticality in personalized whole-brain models of stroke.

Authors:  Rodrigo P Rocha; Loren Koçillari; Samir Suweis; Michele De Filippo De Grazia; Michel Thiebaut de Schotten; Marco Zorzi; Maurizio Corbetta
Journal:  Nat Commun       Date:  2022-06-27       Impact factor: 17.694

3.  Lessons from a catalogue of 6674 brain recordings.

Authors:  Alexis D J Makin; John Tyson-Carr; Giulia Rampone; Yiovanna Derpsch; Damien Wright; Marco Bertamini
Journal:  Elife       Date:  2022-06-15       Impact factor: 8.713

4.  Task-related connectivity of decision points during spatial navigation in a schematic map.

Authors:  Qing Qi; Yihe Weng; Senning Zheng; Shuai Wang; Siqi Liu; Qinda Huang; Ruiwang Huang
Journal:  Brain Struct Funct       Date:  2022-02-23       Impact factor: 3.748

5.  A methodological checklist for fMRI drug cue reactivity studies: development and expert consensus.

Authors:  Mehran Zare-Bidoky; Arshiya Sangchooli; Hamed Ekhtiari; Amy C Janes; Marc J Kaufman; Jason A Oliver; James J Prisciandaro; Torsten Wüstenberg; Raymond F Anton; Patrick Bach; Alex Baldacchino; Anne Beck; James M Bjork; Judson Brewer; Anna Rose Childress; Eric D Claus; Kelly E Courtney; Mohsen Ebrahimi; Francesca M Filbey; Dara G Ghahremani; Peyman Ghobadi Azbari; Rita Z Goldstein; Anna E Goudriaan; Erica N Grodin; J Paul Hamilton; Colleen A Hanlon; Peyman Hassani-Abharian; Andreas Heinz; Jane E Joseph; Falk Kiefer; Arash Khojasteh Zonoozi; Hedy Kober; Rayus Kuplicki; Qiang Li; Edythe D London; Joseph McClernon; Hamid R Noori; Max M Owens; Martin P Paulus; Irene Perini; Marc Potenza; Stéphane Potvin; Lara Ray; Joseph P Schacht; Dongju Seo; Rajita Sinha; Michael N Smolka; Rainer Spanagel; Vaughn R Steele; Elliot A Stein; Sabine Steins-Loeber; Susan F Tapert; Antonio Verdejo-Garcia; Sabine Vollstädt-Klein; Reagan R Wetherill; Stephen J Wilson; Katie Witkiewitz; Kai Yuan; Xiaochu Zhang; Anna Zilverstand
Journal:  Nat Protoc       Date:  2022-02-04       Impact factor: 17.021

6.  Bayes estimate of primary threshold in clusterwise functional magnetic resonance imaging inferences.

Authors:  Yunjiang Ge; Stephanie Hare; Gang Chen; James A Waltz; Peter Kochunov; L Elliot Hong; Shuo Chen
Journal:  Stat Med       Date:  2021-07-26       Impact factor: 2.373

7.  Decreased connection density and modularity of functional brain networks during n-back working memory paradigm.

Authors:  Zalan Kaposzta; Orestis Stylianou; Peter Mukli; Andras Eke; Frigyes Samuel Racz
Journal:  Brain Behav       Date:  2020-11-13       Impact factor: 2.708

8.  Creating clear and informative image-based figures for scientific publications.

Authors:  Helena Jambor; Alberto Antonietti; Bradly Alicea; Tracy L Audisio; Susann Auer; Vivek Bhardwaj; Steven J Burgess; Iuliia Ferling; Małgorzata Anna Gazda; Luke H Hoeppner; Vinodh Ilangovan; Hung Lo; Mischa Olson; Salem Yousef Mohamed; Sarvenaz Sarabipour; Aalok Varma; Kaivalya Walavalkar; Erin M Wissink; Tracey L Weissgerber
Journal:  PLoS Biol       Date:  2021-03-31       Impact factor: 8.029

9.  Best practices for fNIRS publications.

Authors:  Meryem A Yücel; Alexander V Lühmann; Felix Scholkmann; Judit Gervain; Ippeita Dan; Hasan Ayaz; David Boas; Robert J Cooper; Joseph Culver; Clare E Elwell; Adam Eggebrecht; Maria A Franceschini; Christophe Grova; Fumitaka Homae; Frédéric Lesage; Hellmuth Obrig; Ilias Tachtsidis; Sungho Tak; Yunjie Tong; Alessandro Torricelli; Heidrun Wabnitz; Martin Wolf
Journal:  Neurophotonics       Date:  2021-01-07       Impact factor: 3.593

10.  Evaluating the Reliability of Human Brain White Matter Tractometry.

Authors:  John Kruper; Jason D Yeatman; Adam Richie-Halford; David Bloom; Mareike Grotheer; Sendy Caffarra; Gregory Kiar; Iliana I Karipidis; Ethan Roy; Bramsh Q Chandio; Eleftherios Garyfallidis; Ariel Rokem
Journal:  Apert Neuro       Date:  2021-11-17
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