Literature DB >> 32432457

The Siderophore Synthetase IucA of the Aerobactin Biosynthetic Pathway Uses an Ordered Mechanism.

Lisa S Mydy1, Daniel C Bailey1, Ketan D Patel1, Matthew R Rice1, Andrew M Gulick1.   

Abstract

Biosynthesis of the hydroxamate siderophore aerobactin requires the activity of four proteins encoded within the iuc operon. Recently, we biochemically reconstituted the biosynthetic pathway and structurally characterized IucA and IucC, two enzymes that sequentially couple N6-acetyl-N6-hydroxylysine to the primary carboxylates of citrate. IucA and IucC are members of a family of non-ribosomal peptide synthetase-independent siderophore (NIS) synthetases that are involved in the production of other siderophores, including desferrioxamine, achromobactin, and petrobactin. While structures of several members of this family were solved previously, there is limited mechanistic insight into the reaction catalyzed by NIS synthetases. Therefore, we performed a terreactant steady-state kinetic analysis and herein provide evidence for an ordered mechanism in which the chemistry is preceded by the formation of the quaternary complex. We further probed two regions of the active site with site-directed mutagenesis and identified several residues, including a conserved motif that is present on a dynamic loop, that are important for substrate binding and catalysis.

Entities:  

Mesh:

Substances:

Year:  2020        PMID: 32432457      PMCID: PMC7325057          DOI: 10.1021/acs.biochem.0c00250

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  32 in total

Review 1.  The chemical biology and coordination chemistry of putrebactin, avaroferrin, bisucaberin, and alcaligin.

Authors:  Rachel Codd; Cho Zin Soe; Amalie A H Pakchung; Athavan Sresutharsan; Christopher J M Brown; William Tieu
Journal:  J Biol Inorg Chem       Date:  2018-06-26       Impact factor: 3.358

2.  Plotting methods for analyzing enzyme rate data.

Authors:  F B Rudolph; H J Fromm
Journal:  Methods Enzymol       Date:  1979       Impact factor: 1.600

Review 3.  Conformational dynamics in the Acyl-CoA synthetases, adenylation domains of non-ribosomal peptide synthetases, and firefly luciferase.

Authors:  Andrew M Gulick
Journal:  ACS Chem Biol       Date:  2009-10-16       Impact factor: 5.100

4.  A cluster of five genes specifying the aerobactin iron uptake system of plasmid ColV-K30.

Authors:  N H Carbonetti; P H Williams
Journal:  Infect Immun       Date:  1984-10       Impact factor: 3.441

Review 5.  Mechanism and regulation of synthesis of aerobactin in Escherichia coli K12 (pColV-K30).

Authors:  J B Neilands
Journal:  Can J Microbiol       Date:  1992-07       Impact factor: 2.419

6.  Structural and functional delineation of aerobactin biosynthesis in hypervirulent Klebsiella pneumoniae.

Authors:  Daniel C Bailey; Evan Alexander; Matthew R Rice; Eric J Drake; Lisa S Mydy; Courtney C Aldrich; Andrew M Gulick
Journal:  J Biol Chem       Date:  2018-04-04       Impact factor: 5.157

7.  Dissecting the Mechanism of Oligomerization and Macrocyclization Reactions of NRPS-Independent Siderophore Synthetases.

Authors:  Sina Rütschlin; Thomas Böttcher
Journal:  Chemistry       Date:  2018-10-17       Impact factor: 5.236

8.  Structural basis for acyl acceptor specificity in the achromobactin biosynthetic enzyme AcsD.

Authors:  Stefan Schmelz; Catherine H Botting; Lijiang Song; Nadia F Kadi; Gregory L Challis; James H Naismith
Journal:  J Mol Biol       Date:  2011-08-01       Impact factor: 5.469

9.  A new family of ATP-dependent oligomerization-macrocyclization biocatalysts.

Authors:  Nadia Kadi; Daniel Oves-Costales; Francisco Barona-Gomez; Gregory L Challis
Journal:  Nat Chem Biol       Date:  2007-08-19       Impact factor: 15.040

10.  AcsD catalyzes enantioselective citrate desymmetrization in siderophore biosynthesis.

Authors:  Stefan Schmelz; Nadia Kadi; Stephen A McMahon; Lijiang Song; Daniel Oves-Costales; Muse Oke; Huanting Liu; Kenneth A Johnson; Lester G Carter; Catherine H Botting; Malcolm F White; Gregory L Challis; James H Naismith
Journal:  Nat Chem Biol       Date:  2009-02-01       Impact factor: 15.040

View more
  3 in total

1.  Siderophores Produced by the Fish Pathogen Flavobacterium columnare Strain MS-FC-4 Are Not Essential for Its Virulence.

Authors:  Rachel A Conrad; Jason P Evenhuis; Ryan S Lipscomb; Clayton Birkett; Mark J McBride
Journal:  Appl Environ Microbiol       Date:  2022-08-15       Impact factor: 5.005

2.  Genomic Analysis of Stropharia rugosoannulata Reveals Its Nutritional Strategy and Application Potential in Bioremediation.

Authors:  Ying Yang; Guoliang Meng; Shujun Ni; Haifeng Zhang; Caihong Dong
Journal:  J Fungi (Basel)       Date:  2022-02-06

3.  Metabolite Profiling of Malaysian Gracilaria edulis Reveals Eplerenone as Novel Antibacterial Compound for Drug Repurposing Against MDR Bacteria.

Authors:  Ali Asghar; Yong-Chiang Tan; Muhammad Shahid; Yoon-Yen Yow; Chandrajit Lahiri
Journal:  Front Microbiol       Date:  2021-06-30       Impact factor: 5.640

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.