Literature DB >> 32431737

Replicated anthropogenic hybridisations reveal parallel patterns of admixture in marine mussels.

Alexis Simon1, Christine Arbiol1, Einar Eg Nielsen2, Jérôme Couteau3, Rossana Sussarellu4, Thierry Burgeot4, Ismaël Bernard5, Joop W P Coolen6,7, Jean-Baptiste Lamy8, Stéphane Robert8, Maria Skazina9,10, Petr Strelkov9,10, Henrique Queiroga11, Ibon Cancio12, John J Welch13, Frédérique Viard14, Nicolas Bierne1.   

Abstract

Human-mediated transport creates secondary contacts between genetically differentiated lineages, bringing new opportunities for gene exchange. When similar introductions occur in different places, they provide informally replicated experiments for studying hybridisation. We here examined 4,279 Mytilus mussels, sampled in Europe and genotyped with 77 ancestry-informative markers. We identified a type of introduced mussels, called "dock mussels," associated with port habitats and displaying a particular genetic signal of admixture between M. edulis and the Mediterranean lineage of M. galloprovincialis. These mussels exhibit similarities in their ancestry compositions, regardless of the local native genetic backgrounds and the distance separating colonised ports. We observed fine-scale genetic shifts at the port entrance, at scales below natural dispersal distance. Such sharp clines do not fit with migration-selection tension zone models, and instead suggest habitat choice and early-stage adaptation to the port environment, possibly coupled with connectivity barriers. Variations in the spread and admixture patterns of dock mussels seem to be influenced by the local native genetic backgrounds encountered. We next examined departures from the average admixture rate at different loci, and compared human-mediated admixture events, to naturally admixed populations and experimental crosses. When the same M. galloprovincialis background was involved, positive correlations in the departures of loci across locations were found; but when different backgrounds were involved, no or negative correlations were observed. While some observed positive correlations might be best explained by a shared history and saltatory colonisation, others are likely produced by parallel selective events. Altogether, genome-wide effect of admixture seems repeatable and more dependent on genetic background than environmental context. Our results pave the way towards further genomic analyses of admixture, and monitoring of the spread of dock mussels both at large and at fine spacial scales.
© 2019 The Authors. Evolutionary Applications published by John Wiley & Sons Ltd.

Entities:  

Keywords:  admixture; bentho‐pelagic species; biological introductions; clines; ports; secondary contact

Year:  2019        PMID: 32431737      PMCID: PMC7045717          DOI: 10.1111/eva.12879

Source DB:  PubMed          Journal:  Evol Appl        ISSN: 1752-4571            Impact factor:   5.183


  79 in total

1.  Global hot spots of biological invasions: evaluating options for ballast-water management.

Authors:  John M Drake; David M Lodge
Journal:  Proc Biol Sci       Date:  2004-03-22       Impact factor: 5.349

2.  pegas: an R package for population genetics with an integrated-modular approach.

Authors:  Emmanuel Paradis
Journal:  Bioinformatics       Date:  2010-01-14       Impact factor: 6.937

3.  adegenet: a R package for the multivariate analysis of genetic markers.

Authors:  Thibaut Jombart
Journal:  Bioinformatics       Date:  2008-04-08       Impact factor: 6.937

Review 4.  The coupling hypothesis: why genome scans may fail to map local adaptation genes.

Authors:  Nicolas Bierne; John Welch; Etienne Loire; François Bonhomme; Patrice David
Journal:  Mol Ecol       Date:  2011-04-07       Impact factor: 6.185

5.  Combining dependent P-values with an empirical adaptation of Brown's method.

Authors:  William Poole; David L Gibbs; Ilya Shmulevich; Brady Bernard; Theo A Knijnenburg
Journal:  Bioinformatics       Date:  2016-09-01       Impact factor: 6.937

6.  The barrier to genetic exchange between hybridising populations.

Authors:  N Barton; B O Bengtsson
Journal:  Heredity (Edinb)       Date:  1986-12       Impact factor: 3.821

7.  The origin and remolding of genomic islands of differentiation in the European sea bass.

Authors:  Maud Duranton; François Allal; Christelle Fraïsse; Nicolas Bierne; François Bonhomme; Pierre-Alexandre Gagnaire
Journal:  Nat Commun       Date:  2018-06-28       Impact factor: 14.919

8.  Cryptic diversity in smooth-shelled mussels on Southern Ocean islands: connectivity, hybridisation and a marine invasion.

Authors:  Małgorzata Zbawicka; Jonathan P A Gardner; Roman Wenne
Journal:  Front Zool       Date:  2019-08-06       Impact factor: 3.172

9.  Coadapted genomes and selection on hybrids: Fisher's geometric model explains a variety of empirical patterns.

Authors:  Alexis Simon; Nicolas Bierne; John J Welch
Journal:  Evol Lett       Date:  2018-08-14

10.  Can secondary contact following range expansion be distinguished from barriers to gene flow?

Authors:  Johanna Bertl; Harald Ringbauer; Michael G B Blum
Journal:  PeerJ       Date:  2018-10-01       Impact factor: 2.984

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  5 in total

Review 1.  Anthropogenic hybridization at sea: three evolutionary questions relevant to invasive species management.

Authors:  Frédérique Viard; Cynthia Riginos; Nicolas Bierne
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-07-13       Impact factor: 6.237

2.  Linking individual and population patterns of rocky-shore mussels.

Authors:  Romina Vanessa Barbosa; Cédric Bacher; Fred Jean; Yoann Thomas
Journal:  PeerJ       Date:  2021-12-24       Impact factor: 2.984

3.  Prevalence and polymorphism of a mussel transmissible cancer in Europe.

Authors:  Maurine Hammel; Alexis Simon; Christine Arbiol; Antonio Villalba; Erika A V Burioli; Jean-François Pépin; Jean-Baptiste Lamy; Abdellah Benabdelmouna; Ismael Bernard; Maryline Houssin; Guillaume M Charrière; Delphine Destoumieux-Garzon; John J Welch; Michael J Metzger; Nicolas Bierne
Journal:  Mol Ecol       Date:  2021-07-16       Impact factor: 6.185

4.  Genomic signatures of admixture and selection are shared among populations of Zaprionus indianus across the western hemisphere.

Authors:  Aaron A Comeault; Andreas F Kautt; Daniel R Matute
Journal:  Mol Ecol       Date:  2021-07-21       Impact factor: 6.622

5.  Trans-Atlantic Distribution and Introgression as Inferred from Single Nucleotide Polymorphism: Mussels Mytilus and Environmental Factors.

Authors:  Roman Wenne; Małgorzata Zbawicka; Lis Bach; Petr Strelkov; Mikhail Gantsevich; Piotr Kukliński; Tomasz Kijewski; John H McDonald; Kristil Kindem Sundsaasen; Mariann Árnyasi; Sigbjørn Lien; Ants Kaasik; Kristjan Herkül; Jonne Kotta
Journal:  Genes (Basel)       Date:  2020-05-10       Impact factor: 4.096

  5 in total

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