Literature DB >> 32429001

Searching for valuable differentially expressed miRNAs in postmenopausal osteoporosis by RNA sequencing.

Randong Wang1, Aiping Lu2, Wangyan Liu1, Juan Yue1, Qiang Sun1, Jiao Chen1, Huijie Luan1, Yaling Zhai1, Bing Li1, Zhongcai Jiang3, Yingnan Li1.   

Abstract

AIM: Postmenopausal osteoporosis is a systemic and chronic bone disease in women. In order to understand the pathological mechanism of postmenopausal osteoporosis, we aimed to find the potential differentially expressed miRNAs in the disease.
METHODS: Firstly, RNA sequencing was used to identify differentially expressed miRNAs, followed by the construction of the miRNA-target mRNA regulatory network. Then, Gene Ontology and the Kyoto Encyclopedia of Genes and Genomes were used to analyze the biological function of target mRNAs. Finally, electronic validation of identified differentially expressed miRNAs and target mRNAs was performed.
RESULTS: A total of 33 differentially expressed miRNAs (18 upregulated and 15 downregulated miRNAs) and 6820 miRNA-mRNA pairs were identified. Among which, seven miRNAs with high degree including hsa-miR-17-5p, hsa-miR-1-3p, hsa-miR-193b-3p, hsa-miR-125b-5p, hsa-miR-10b-5p, hsa-miR-100-5p and hsa-miR-30a-3p were obtained in the miRNA-mRNA regulatory network. TGF-beta was the most significantly enriched signaling pathway of target mRNAs. The electronic validation result of hsa-miR-1-3p, hsa-miR-193b-3p, hsa-miR-10b-5p, hsa-miR-100-5p, hsa-miR-133b, hsa-miR-708-5p, CRK, RAB5C, CCND1 and PCYOX1 was consisted with the RNA sequencing analysis.
CONCLUSION: Dysfunctional miRNAs may play significant roles in postmenopausal osteoporosis.
© 2020 Japan Society of Obstetrics and Gynecology.

Entities:  

Keywords:  RNA sequencing; TGF-beta signal pathway; differentially expressed miRNAs; postmenopausal osteoporosis

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Year:  2020        PMID: 32429001     DOI: 10.1111/jog.14307

Source DB:  PubMed          Journal:  J Obstet Gynaecol Res        ISSN: 1341-8076            Impact factor:   1.730


  1 in total

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  1 in total

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