Literature DB >> 32421266

Prevalence of the root lesion nematode virus (RLNV1) in populations of Pratylenchus penetrans from North America.

Paulo Vieira1, Amy Peetz2, Benjamin Mimee3, Kanan Saikai4, Dimitre Mollov5, Ann MacGuidwin4, Inga Zasada2, Lev G Nemchinov6.   

Abstract

Root lesion nematode virus 1 (RLNV1) was discovered in the migratory endoparasitic nematode species Pratylenchus penetrans. It was found in a P. penetrans population collected from soil samples in Beltsville, Maryland, USA. In this study, the distribution of the RLNV1 in 31 geographically distinct P. penetrans populations obtained from different crops was examined. The results demonstrate that RLNV1 is widespread in North American populations of P. penetrans and exhibits low genetic variability in the helicase and RNA-dependent RNA polymerase regions of the genome. Root lesion nematode virus 1 (RLNV1) was discovered in the migratory endoparasitic nematode species Pratylenchus penetrans. It was found in a P. penetrans population collected from soil samples in Beltsville, Maryland, USA. In this study, the distribution of the RLNV1 in 31 geographically distinct P. penetrans populations obtained from different crops was examined. The results demonstrate that RLNV1 is widespread in North American populations of P. penetrans and exhibits low genetic variability in the helicase and RNA-dependent RNA polymerase regions of the genome.

Entities:  

Year:  2020        PMID: 32421266     DOI: 10.21307/jofnem-2020-045

Source DB:  PubMed          Journal:  J Nematol        ISSN: 0022-300X            Impact factor:   1.402


  15 in total

Review 1.  Natural Viruses of Caenorhabditis Nematodes.

Authors:  Marie-Anne Félix; David Wang
Journal:  Annu Rev Genet       Date:  2019-08-19       Impact factor: 16.830

Review 2.  Top 10 plant-parasitic nematodes in molecular plant pathology.

Authors:  John T Jones; Annelies Haegeman; Etienne G J Danchin; Hari S Gaur; Johannes Helder; Michael G K Jones; Taisei Kikuchi; Rosa Manzanilla-López; Juan E Palomares-Rius; Wim M L Wesemael; Roland N Perry
Journal:  Mol Plant Pathol       Date:  2013-07-01       Impact factor: 5.663

3.  A novel species of RNA virus associated with root lesion nematode Pratylenchus penetrans.

Authors:  Paulo Vieira; Lev G Nemchinov
Journal:  J Gen Virol       Date:  2019-03-14       Impact factor: 3.891

4.  A novel flavivirus in the soybean cyst nematode.

Authors:  Sadia Bekal; Leslie L Domier; Biruk Gonfa; Nancy K McCoppin; Kris N Lambert; Kaustubh Bhalerao
Journal:  J Gen Virol       Date:  2014-03-18       Impact factor: 3.891

5.  The Pratylenchus penetrans Transcriptome as a Source for the Development of Alternative Control Strategies: Mining for Putative Genes Involved in Parasitism and Evaluation of in planta RNAi.

Authors:  Paulo Vieira; Sebastian Eves-van den Akker; Ruchi Verma; Sarah Wantoch; Jonathan D Eisenback; Kathryn Kamo
Journal:  PLoS One       Date:  2015-12-14       Impact factor: 3.240

6.  Soybean cyst nematode culture collections and field populations from North Carolina and Missouri reveal high incidences of infection by viruses.

Authors:  Casey L Ruark; Stephen R Koenning; Eric L Davis; Charles H Opperman; Steven A Lommel; Melissa G Mitchum; Tim L Sit
Journal:  PLoS One       Date:  2017-01-31       Impact factor: 3.240

7.  Novel RNA viruses within plant parasitic cyst nematodes.

Authors:  Casey L Ruark; Michael Gardner; Melissa G Mitchum; Eric L Davis; Tim L Sit
Journal:  PLoS One       Date:  2018-03-06       Impact factor: 3.240

8.  Discovery of two highly divergent negative-sense RNA viruses associated with the parasitic nematode, Capillaria hepatica, in wild Mus musculus from New York City.

Authors:  Simon H Williams; Xiaoyu Che; Alexandra Oleynik; Joel A Garcia; Dorothy Muller; Tanja S Zabka; Cadhla Firth; Robert M Corrigan; Thomas Briese; Komal Jain; W Ian Lipkin
Journal:  J Gen Virol       Date:  2019-09-12       Impact factor: 3.891

9.  Noda-Like RNA Viruses Infecting Caenorhabditis Nematodes: Sympatry, Diversity, and Reassortment.

Authors:  Lise Frézal; Hyeim Jung; Stephen Tahan; David Wang; Marie-Anne Félix
Journal:  J Virol       Date:  2019-10-15       Impact factor: 5.103

10.  MUSCLE: a multiple sequence alignment method with reduced time and space complexity.

Authors:  Robert C Edgar
Journal:  BMC Bioinformatics       Date:  2004-08-19       Impact factor: 3.169

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