Literature DB >> 32417962

Genetic analysis of SLC26A4 gene (pendrin) related deafness among a cohort of assortative mating families from southern India.

Jayasankaran Chandru1, Justin Margret Jeffrey1, Amritkumar Pavithra1,2, S Paridhy Vanniya1, G Nandhini Devi1, Subathra Mahalingam1, Natarajan Padmavathy Karthikeyen3, C R Srikumari Srisailapathy4.   

Abstract

PURPOSE: Assortative mating (AM) or preferential mating is known to influence the genetic architecture of the hearing-impaired (HI) population. AM is now seen as a universal phenomenon with individuals seeking partners based on quantitative, qualitative, and behavioral phenotypes. However, the molecular genetic dynamics of AM among the HI tested in real time are limited to the DFNB1 locus.
METHODS: A total of 113 HI partners from 82 South Indian families (52 deaf marrying deaf and 30 deaf marrying normal), previously excluded for DFNB1 (GJB2/6) etiology, were screened for SLC26A4 gene (DFNB4) variants.
RESULTS: A spectrum of seven pathogenic variants viz., p.S90L, p.V239D, p.V359E, p.Gly389Trpfs*79 (novel), p.T410M, p.N457K and p.K715N were identified. The pathogenic allele frequency of SLC26A4 variants identified in this study was 3.98% (9/226).
CONCLUSION: We recommend a preliminary screening of mutational hotspots for future investigations to rapidly test for its recurrence among South Indian HI population. This will be the first study to comprehensively account for the incidence of SLC26A4 gene variants and the real-time dynamics of DFNB4 variants among this type of a HI cohort.

Entities:  

Keywords:  Assortative mating; DFNB4; Gene dynamics; Hearing impaired; SLC26A4; South India

Mesh:

Substances:

Year:  2020        PMID: 32417962     DOI: 10.1007/s00405-020-06026-3

Source DB:  PubMed          Journal:  Eur Arch Otorhinolaryngol        ISSN: 0937-4477            Impact factor:   2.503


  22 in total

1.  A mutation in PDS causes non-syndromic recessive deafness.

Authors:  X C Li; L A Everett; A K Lalwani; D Desmukh; T B Friedman; E D Green; E R Wilcox
Journal:  Nat Genet       Date:  1998-03       Impact factor: 38.330

2.  Spectrum and frequency of GJB2, GJB6 and SLC26A4 gene mutations among nonsyndromic hearing loss patients in eastern part of India.

Authors:  Bidisha Adhikary; Sudakshina Ghosh; Silpita Paul; Biswabandhu Bankura; Arup Kumar Pattanayak; Subhradev Biswas; Biswanath Maity; Madhusudan Das
Journal:  Gene       Date:  2015-07-16       Impact factor: 3.688

3.  High incidence of GJB2 gene mutations among assortatively mating hearing impaired families in Kerala: future implications.

Authors:  Amritkumar Pavithra; Justin Margret Jeffrey; Jayasankaran Chandru; Arabandi Ramesh; C R Srikumari Srisailapathy
Journal:  J Genet       Date:  2014-04       Impact factor: 1.166

4.  Origins and frequencies of SLC26A4 (PDS) mutations in east and south Asians: global implications for the epidemiology of deafness.

Authors:  H-J Park; S Shaukat; X-Z Liu; S H Hahn; S Naz; M Ghosh; H-N Kim; S-K Moon; S Abe; K Tukamoto; S Riazuddin; M Kabra; R Erdenetungalag; J Radnaabazar; S Khan; A Pandya; S-I Usami; W E Nance; E R Wilcox; S Riazuddin; A J Griffith
Journal:  J Med Genet       Date:  2003-04       Impact factor: 6.318

Review 5.  Genetics, genomics and gene discovery in the auditory system.

Authors:  Cynthia C Morton
Journal:  Hum Mol Genet       Date:  2002-05-15       Impact factor: 6.150

6.  SLC26A4 mutation frequency and spectrum in 109 Danish Pendred syndrome/DFNB4 probands and a report of nine novel mutations.

Authors:  N D Rendtorff; I Schrijver; M Lodahl; J Rodriguez-Paris; T Johnsen; E C Hansén; L A A Nickelsen; Z Tümer; T Fagerheim; R Wetke; L Tranebjaerg
Journal:  Clin Genet       Date:  2013-01-22       Impact factor: 4.438

7.  Two frequent missense mutations in Pendred syndrome.

Authors:  P Van Hauwe; L A Everett; P Coucke; D A Scott; M L Kraft; C Ris-Stalpers; C Bolder; B Otten; J J de Vijlder; N L Dietrich; A Ramesh; S C Srisailapathy; A Parving; C W Cremers; P J Willems; R J Smith; E D Green; G Van Camp
Journal:  Hum Mol Genet       Date:  1998-07       Impact factor: 6.150

8.  Localization of a novel gene for nonsyndromic hearing loss (DFNB17) to chromosome region 7q31.

Authors:  J H Greinwald; S Wayne; A H Chen; D A Scott; R I Zbar; M L Kraft; S Prasad; A Ramesh; P Coucke; C R Srisailapathy; M Lovett; G Van Camp; R J Smith
Journal:  Am J Med Genet       Date:  1998-06-30

9.  Mutations in OTOF, CLDN14 & SLC26A4 genes as major causes of hearing impairment in Dhadkai village, Jammu & Kashmir, India.

Authors:  Nishtha Pandey; Tabassum Rashid; Rajeev Jalvi; Meenakshi Sharma; Raghunath Rangasayee; Khurshid Iqbal Andrabi; Anuranjan Anand
Journal:  Indian J Med Res       Date:  2017-10       Impact factor: 2.375

10.  Role of DFNB1 mutations in hereditary hearing loss among assortative mating hearing impaired families from South India.

Authors:  Pavithra Amritkumar; Justin Margret Jeffrey; Jayasankaran Chandru; Paridhy Vanniya S; M Kalaimathi; Rajagopalan Ramakrishnan; N P Karthikeyen; C R Srikumari Srisailapathy
Journal:  BMC Med Genet       Date:  2018-06-19       Impact factor: 2.103

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  1 in total

1.  Different Rates of the SLC26A4-Related Hearing Loss in Two Indigenous Peoples of Southern Siberia (Russia).

Authors:  Valeriia Yu Danilchenko; Marina V Zytsar; Ekaterina A Maslova; Marita S Bady-Khoo; Nikolay A Barashkov; Igor V Morozov; Alexander A Bondar; Olga L Posukh
Journal:  Diagnostics (Basel)       Date:  2021-12-17
  1 in total

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