| Literature DB >> 32416838 |
Daniel L Clark1, Sandra G Velleman2, Matthew Bernier3, Janet McCormick2, Joshua J Blakeslee4.
Abstract
The phenotype of modern commercial turkeys is substantially different than that of unselected, heritage turkey lines. These phenotypic changes have arisen from alterations in the genome/transcriptome, as well as the influence of many external factors on growth performance including nutrition, environment, and management. To investigate the phenotypic changes resulting from genetic selection for increased body weight, The Ohio State University maintains 2 unique genetic turkey lines: the randombred control (RBC2) line, which is comprised of genetics from 1960 era commercial turkeys and has been maintained without conscious selection for any trait; and the F line, which was originally selected from the RBC2 line and has been selected for increased 16 wk body weight for over 50 generations. This study used broad-spectrum mass-spectrometry profiling techniques to identify and quantify differences in the metabolome of the serum of F and RBC2 turkey lines. Serum samples from both F and RBC2 turkeys were subject to quantitative time of flight liquid chromatography tandem mass spectrometry analyses. Principle component analyses showed distinct populations of metabolites in the F vs. RBC2 serum, suggesting that increased body weight is associated with the accumulation of several metabolites. Comparing the spectral features to online databases resulted in the selection of 104 features with potentially identifiable chemical structures. Of these 104 features, 25 were found at higher levels in the serum of the RBC2 line turkeys, while 79 were found at a greater abundance in the F line turkeys. A more detailed analysis of these 104 features allowed for the putative identification of 49 compounds, which were clustered into 6 functional groups: 1) energy metabolism; 2) vitamins; 3) hormones and signaling molecules; 4) lipid derivatives, fatty acid metabolites, and membrane components; 5) amino acid/protein metabolism; and 6) microbial metabolites. Further validation and experimentation is needed to confirm the identity of these metabolites and understand their biological relevance and association with selection for increased body weight.Entities:
Keywords: Growth selection; metabolome; serum; turkey
Mesh:
Substances:
Year: 2019 PMID: 32416838 PMCID: PMC7587827 DOI: 10.3382/ps/pez493
Source DB: PubMed Journal: Poult Sci ISSN: 0032-5791 Impact factor: 4.014
Figure 1Principle component analyses (PCA) of features found in the serum of randombred control line 2 (RBC2) (control; squares) and F (selected for increased muscle mass; diamonds) turkey lines. (A) PCA plot of the approximately 2,700 features identified with a cut-off value of P ≤ 0.5. Analyses show distinct populations of metabolites in RBC2 vs. F lines. (B) PCA plot of putatively identified metabolites (104 features) in RBC2 (control; squares) and F (increased muscle mass; diamonds) lines. The putatively identified metabolites show clear separation (differential accumulation) between the 2 lines.
Putative serum metabolites associated with energy metabolism, vitamins, and hormones or signaling molecules in a turkey line selected for 16 wk body weight (F) and a randombred control line 2 (RBC2).
| Metabolite | HMBD ID number | Mean fold change | Retention time (min) |
|---|---|---|---|
| Oxalosuccinic acid | HMDB03974 | −2.07 | 1.08 |
| QH(2) | HMDB59661 | −2.01 | 3.90 |
| Diadenosine diphosphate | HMDB01312 | 1.85 | 9.61 |
| 6-Hydroxy flavin adenine dinucleotide | HMDB11612 | 2.30 | 8.72 |
| Cob(I)yrinate a,c diamide | HMDB06904 | 1.55 | 9.54 |
| Estradiol | HMDB00151 | −2.16 | 1.92 |
| Neuromedin C | HMDB13020 | −1.82 | 17.04 |
| 18-Oxocortisol | HMDB00332 | 1.64 | 9.10 |
Negative values indicate higher expression in the RBC2 line compared to the F line, whereas positive values indicate greater expression in the F line.
Indistinguishable from Oxytocin 1–8, HMDB13033.
Likely a terpine molecule; however, there is a possibility that this feature may correspond to a carnitine derivative.
Likely oxocortisol; however, this compound may be another polyterpenoid.
Putative serum metabolites associated with lipid derivatives and fatty acid metabolism in a turkey line selected for 16 wk body weight (F) and a randombred control line 2 (RBC2).
| Metabolite | HMBD ID number | Mean fold change | Retention time (min) |
|---|---|---|---|
| Decenoyl-CoA, derivative | HMDB01291 | −1.87 | 9.62 |
| Glycerophospholipid (18:2/22:6), derivative | HMDB10659 | −1.85 | 3.23 |
| 2,4-Decadienoyl-CoA | HMDB01168 | −1.83 | 9.44 |
| Phosphatidylethanolamine (DiMe(13,5)/DiMe(13,5)) | HMDB61491 | −1.83 | 9.43 |
| Triacylglyceride(20:5/18:2/20:5), derivative | HMDB10536 | −1.81 | 9.65 |
| Monoacylglyceride (14:0), derivative | HMDB11530 | −1.52 | 8.34 |
| Cardiolipin (18:1/18:0/18:1/18:2), derivative | HMDB57894 | 1.34 | 17.15 |
| Triacylglyceride (15:0/18:3/18:4), derivative | HMDB43447 | 1.48 | 9.96 |
| Cardiolipin (i-12:0/i-22:0/i-24:0/i-24:0), derivative | HMDB89194 | 1.52 | 9.48 |
| Triacylglyceride (15:0/18:0/o-18:0), derivative | HMDB43075 | 1.52 | 9.91 |
| Lignocericyl coenzyme A | HMDB60239 | 1.63 | 11.20 |
| 1,2-Di-(octadecatrienoyl)-3-(galactosyl-alpha-1-6- galactosyl-beta-1)-glycerol | HMDB11127 | 1.64 | 9.54 |
| Ganglioside GT2 (d18:0/12:0) | HMDB12022 | 1.65 | 10.32 |
| Ganglioside GQ1c (d18:0/18:0) | HMDB11935 | 1.70 | 5.77 |
| Ganglioside GD1a (d18:1/12:0) | HMDB11792 | 1.74 | 9.61 |
| Triacylglyceride (18:4/18:4/18:4) | HMDB55501 | 1.79 | 6.79 |
| Phosphatidylcholine (22:4/20:2), derivative | HMDB08637 | 1.81 | 8.72 |
| Phosphatidylcholine (22:0/24:0), derivative | HMDB08289 | 1.85 | 8.63 |
| Triacylglyceride (20:5/18:2/20:5), derivative | HMDB10536 | 1.86 | 9.61 |
| Phosphatidylcholine (o-14:0/16:0) | HMDB13341 | 1.87 | 5.87 |
| Phosphatidylethanolamine (20:2/P-18:1),derivative | HMDB09314 | 1.88 | 9.58 |
| Ganglioside GD2 (d18:0/14:0) | HMDB11838 | 1.95 | 4.21 |
| Acetoacetyl-CoA | HMDB01484 | 1.95 | 6.11 |
| Cardiolipin (i-13:0/i-24:0/i-24:0/i-24:0), derivative | HMDB74900 | 1.97 | 6.23 |
| Shingolipid, ceramide (d18:1/23:0) | HMDB00950 | 2.05 | 6.44 |
| Glycerophospholipid (18:1/18:0), derivative | HMDB10617 | 2.06 | 5.61 |
| Cholesterol ester (15:0) | HMDB60057 | 2.11 | 5.87 |
Negative values indicate higher expression in the RBC2 line compared to the F line, whereas positive values indicate greater expression in the F line.
May correspond to a glycerophospholipid (18:3/22:5) derivative.
The fatty acid chains may be esterified at any of the 3 positions on the glycerol molecule.
May correspond to a number of triacylglycerides or a combination of triacylglycerides which other esterified fatty acids.
May correspond to other fatty acid metabolites (HMDB00701, HMDB00747, or HMDB02087).
May correspond to a number of other cardiolipins with a variety of other esterified fatty acids.
May correspond to a triacylglyceride (15:0/22:6/14:1) derivative (HMDB43778).
May correspond to tetracosanoyl-CoA (HMDB06526).
This compound also corresponds to 2 other spectral features with a fold change of 1.56 and 1.65.
May correspond to ganglioside GD1b (d18:1/12:0), HMDB11822.
May correspond to other phosphatidylcholine derivatives with 2 fatty acids of carbon lengths 20 and 22 with a total of 6 double bonds.
May correspond to a variety of triglycerides esterified to one 15:0 fatty acid and at least 1 polyunsaturated fatty acid.
May correspond to phosphatidylethanolamine (20:3/P-18:0) derivative.
May correspond to a cardiolipin (i13-0/i-22:0/a-25:0/a-25:0) derivative.
May correspond to a diacylglyceride (22:4/22:5) derivative.
Putative serum metabolites associated with protein metabolism and microbial fermentation in a turkey line selected for 16 wk body weight (F) and a randombred control line 2 (RBC2).
| Metabolite | HMBD ID number | Mean fold change | Retention time (min) |
|---|---|---|---|
| Hydroxyprolyl-tyrosine | HMDB28875 | −4.17 | 8.33 |
| Tryptophyl-glutamine | HMDB29081 | −2.22 | 17.13 |
| Gamma-glutamyl glutamine | HMDB11738 | −1.66 | 6.10 |
| L-alpha-glutamyl-L-hydroxyproline | HMDB11161 | 1.48 | 1.34 |
| 2,3-Butanediol | HMDB03156 | 1.47 | 1.40 |
| O-Desmethylangolensin | HMDB04629 | 1.63 | 2.83 |
Negative values indicate higher expression in the RBC2 line compared to the F line, whereas positive values indicate greater expression in the F line.
Indistinguishable from the dipeptide glutamylphenylalanine (HMDB00594).
Indistinguishable from the dipeptides tryptophyl-gamma-glutamate (HMDB29097) and tryptophyl-serine (HMDB29092).