Literature DB >> 32413415

Predicting the Availability of Hematopoietic Stem Cell Donors Using Machine Learning.

Ying Li1, Ausra Masiliune2, David Winstone2, Leszek Gasieniec3, Prudence Wong3, Hong Lin2, Rachel Pawson4, Guy Parkes2, Andrew Hadley5.   

Abstract

Hematopoietic stem cell transplantation (HSCT) is firmly established as an important curative therapy for patients with hematologic malignancies and other blood disorders. Apart from finding HLA-matched donors during the HSCT process, donor availability remains a key consideration as the time taken from diagnosis to transplant is recognized to adversely affect patient outcome. In this study, we aimed to develop and validate a machine learning approach to predict the availability of stem cell donors. We retrospectively collected a data set containing 10,258 verification typing requests made during the HSCT process in the British Bone Marrow Registry (BBMR) between January 1, 2013, and December 31, 2018. Three machine learning algorithms were implemented and compared, including boosted decision trees (BDTs), logistic regression, and support vector machines. Area under the receiver operating characteristic curve (AUC) was primarily used to assess the algorithms. The experimental results showed that BDTs performed better in predicting the availability of BBMR donors. The overall predictive power of the model, using AUC on the test cohort of 2052 records, was found to be 0.826. Our findings show that machine learning can predict the availability of donors with a high degree of accuracy. We propose the use of the BDT machine learning approach to predict the availability of BBMR donors and use the predictive scores during the HSCT process to ensure patients with blood cancers or disorders receive a transplant at the optimum time.
Copyright © 2020 American Society for Transplantation and Cellular Therapy. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  allogeneic hematopoietic stem cell transplantation; donor availability; donor selection; machine learning

Mesh:

Year:  2020        PMID: 32413415     DOI: 10.1016/j.bbmt.2020.03.026

Source DB:  PubMed          Journal:  Biol Blood Marrow Transplant        ISSN: 1083-8791            Impact factor:   5.742


  2 in total

1.  Survival Prediction of Children Undergoing Hematopoietic Stem Cell Transplantation Using Different Machine Learning Classifiers by Performing Chi-Square Test and Hyperparameter Optimization: A Retrospective Analysis.

Authors:  Ishrak Jahan Ratul; Ummay Habiba Wani; Mirza Muntasir Nishat; Abdullah Al-Monsur; Abrar Mohammad Ar-Rafi; Fahim Faisal; Mohammad Ridwan Kabir
Journal:  Comput Math Methods Med       Date:  2022-09-25       Impact factor: 2.809

Review 2.  A Systematic Review of Machine Learning Techniques in Hematopoietic Stem Cell Transplantation (HSCT).

Authors:  Vibhuti Gupta; Thomas M Braun; Mosharaf Chowdhury; Muneesh Tewari; Sung Won Choi
Journal:  Sensors (Basel)       Date:  2020-10-27       Impact factor: 3.576

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.