Literature DB >> 32406050

The correlation analyses of bacterial community composition and spatial factors between freshwater and sediment in Poyang Lake wetland by using artificial neural network (ANN) modeling.

Ran Sun1,2, Zuxin Tu3, Lin Fan1, Zixia Qiao1, Xiaoyan Liu1, Sihai Hu1, Guohua Zheng3,4, Yaoguo Wu5, Ruiwu Wang6, Xiaohui Mi1.   

Abstract

As one of the most important components of the lake ecosystem, microorganisms from the freshwater and sediment play an important role in many ecological processes. However, the difference and correlation of bacterial community between these two niches were not clear. This study investigated the diversity of microbial community of freshwater and sediment samples from fifteen locations in Poyang Lake wetland. The correlation between the bacterial community and physicochemical property of Poyang Lake wetland was analyzed by artificial neural network (ANN). Our results demonstrated that the freshwater and sediment bacterial community were dominated by groups of the Bacteroidetes (23.33%) and β-Proteobacteria (22.54%) separately, whereas, Canalipalpata, Bacillariophyta, Gemmatimonadetes, and Verrucomicrobia were detected in freshwater niches only. Phylogenetic analysis further indicated that bacterial composition in freshwater significantly differed with the sediment niches. There are 34 unique species accounted for 85% in fresh water samples and 28 unique species accounted for 82% in sediment samples. Cluster analysis further proved that all the samples from freshwater niches clustered closely together, far from the rest sediment samples. ANN analysis revealed that the freshwater with high N and P nutrients will greatly increase the diversity of the bacterial communities. In general, both environmental physicochemical properties, not each factor independently, contributed to the shift in the bacterial community structure. The five tributaries (Gan, Fu, Xin, Rao, Xiu Rivers) play a vital role in shaping the bacterial communities of Poyang Lake. This study provides new insights for understanding of microbial community compositions and structures of Poyang Lake wetland.

Entities:  

Keywords:  Artificial neural network; Bacterial community composition; Denaturing gradient gel electrophoresis; Phylogenetic analysis; Poyang Lake

Mesh:

Substances:

Year:  2020        PMID: 32406050      PMCID: PMC7455635          DOI: 10.1007/s42770-020-00285-2

Source DB:  PubMed          Journal:  Braz J Microbiol        ISSN: 1517-8382            Impact factor:   2.476


  28 in total

1.  Comparative analysis of bacterial diversity in freshwater sediment of a shallow eutrophic lake by molecular and improved cultivation-based techniques.

Authors:  Hideyuki Tamaki; Yuji Sekiguchi; Satoshi Hanada; Kazunori Nakamura; Nakao Nomura; Masatoshi Matsumura; Yoichi Kamagata
Journal:  Appl Environ Microbiol       Date:  2005-04       Impact factor: 4.792

2.  Characterization of bacterial communities in four freshwater lakes differing in nutrient load and food web structure.

Authors:  Katleen Van der Gucht; Tom Vandekerckhove; Nele Vloemans; Sylvie Cousin; Koenraad Muylaert; Koen Sabbe; Moniek Gillis; Steven Declerk; Luc De Meester; Wim Vyverman
Journal:  FEMS Microbiol Ecol       Date:  2005-01-19       Impact factor: 4.194

3.  Impact of water quality on bacterioplankton assemblage along Cértima River Basin (central western Portugal) assessed by PCR-DGGE and multivariate analysis.

Authors:  Daniela R de Figueiredo; Raquel V Ferreira; Mário Cerqueira; Teresa Condesso de Melo; Mário J Pereira; Bruno B Castro; António Correia
Journal:  Environ Monit Assess       Date:  2011-03-24       Impact factor: 2.513

4.  Distribution of sediment bacterial and archaeal communities in plateau freshwater lakes.

Authors:  Jingxu Zhang; Yuyin Yang; Lei Zhao; Yuzhao Li; Shuguang Xie; Yong Liu
Journal:  Appl Microbiol Biotechnol       Date:  2014-11-30       Impact factor: 4.813

5.  Level, source identification, and risk analysis of heavy metal in surface sediments from river-lake ecosystems in the Poyang Lake, China.

Authors:  Hua Zhang; Yinghui Jiang; Mingjun Ding; Zhenglei Xie
Journal:  Environ Sci Pollut Res Int       Date:  2017-08-05       Impact factor: 4.223

6.  Diversity and composition of the bacterial community of Poyang Lake (China) as determined by 16S rRNA gene sequence analysis.

Authors:  Lan Wu; Gang Ge; Guofeng Zhu; Shijie Gong; Siguang Li; Jinbao Wan
Journal:  World J Microbiol Biotechnol       Date:  2011-06-21       Impact factor: 3.312

7.  Nitrification in lake sediment with addition of drinking water treatment residuals.

Authors:  Changhui Wang; Juanfeng Liu; Zhixin Wang; Yuansheng Pei
Journal:  Water Res       Date:  2014-03-16       Impact factor: 11.236

8.  A feasibility study on biological nitrogen removal (BNR) via integrated thiosulfate-driven denitratation with anammox.

Authors:  Jin Qian; Mingkuan Zhang; Yaoguo Wu; Juntao Niu; Xing Chang; Hairui Yao; Sihai Hu; Xiangjun Pei
Journal:  Chemosphere       Date:  2018-06-14       Impact factor: 7.086

9.  Microbial community structure and activity linked to contrasting biogeochemical gradients in bog and fen environments of the Glacial Lake Agassiz Peatland.

Authors:  X Lin; S Green; M M Tfaily; O Prakash; K T Konstantinidis; J E Corbett; J P Chanton; W T Cooper; J E Kostka
Journal:  Appl Environ Microbiol       Date:  2012-07-27       Impact factor: 4.792

10.  Vertical distribution and anaerobic biodegradation of polycyclic aromatic hydrocarbons in mangrove sediments in Hong Kong, South China.

Authors:  Chun-Hua Li; Hong-Wei Zhou; Yuk-Shan Wong; Nora Fung-Yee Tam
Journal:  Sci Total Environ       Date:  2009-08-15       Impact factor: 7.963

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  1 in total

1.  A Neural Network Model for Color Element Data Analysis for Urban Spatial Environment.

Authors:  Xiaotang Xia; Tingyang Li
Journal:  Comput Intell Neurosci       Date:  2022-08-21
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