Literature DB >> 32405052

Assembly and operation of an open-source, computer numerical controlled (CNC) robot for performing cranial microsurgical procedures.

Leila Ghanbari1, Daniel Sousa Schulman1, Mathew L Rynes2, Samantha Linn1, Michael Laroque3, Judith Dominguez1, Zahra S Navabi1, Peter Sherman1, Suhasa B Kodandaramaiah4,5.   

Abstract

Cranial microsurgery is an essential procedure for accessing the brain through the skull that can be used to introduce neural probes that measure and manipulate neural activity. Neuroscientists have typically used tools such as high-speed drills adapted from dentistry to perform these procedures. As the number of technologies available for neuroscientists has increased, the corresponding cranial microsurgery procedures to deploy them have become more complex. Using a robotic tool that automatically performs these procedures could standardize cranial microsurgeries across neuroscience laboratories and democratize the more challenging procedures. We have recently engineered a robotic surgery platform that utilizes principles of computer numerical control (CNC) machining to perform a wide variety of automated cranial procedures. Here, we describe how to adapt, configure and use an inexpensive desktop CNC mill equipped with a custom-built surface profiler for performing CNC-guided microsurgery on mice. Detailed instructions are provided to utilize this 'Craniobot' for performing circular craniotomies for coverslip implantation, large craniotomies for implanting transparent polymer skulls for cortex-wide imaging access and skull thinning for intact skull imaging. The Craniobot can be set up in <2 weeks using parts that cost <$1,500, and we anticipate that the Craniobot could be easily adapted for use in other small animals.

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Year:  2020        PMID: 32405052     DOI: 10.1038/s41596-020-0318-4

Source DB:  PubMed          Journal:  Nat Protoc        ISSN: 1750-2799            Impact factor:   13.491


  40 in total

1.  Brain activity mapping at multiple scales with silicon microprobes containing 1,024 electrodes.

Authors:  Justin L Shobe; Leslie D Claar; Sepideh Parhami; Konstantin I Bakhurin; Sotiris C Masmanidis
Journal:  J Neurophysiol       Date:  2015-07-01       Impact factor: 2.714

2.  Preparation and implementation of optofluidic neural probes for in vivo wireless pharmacology and optogenetics.

Authors:  Jordan G McCall; Raza Qazi; Gunchul Shin; Shuo Li; Muhammad Hamza Ikram; Kyung-In Jang; Yuhao Liu; Ream Al-Hasani; Michael R Bruchas; Jae-Woong Jeong; John A Rogers
Journal:  Nat Protoc       Date:  2017-01-05       Impact factor: 13.491

3.  Wireless Optofluidic Systems for Programmable In Vivo Pharmacology and Optogenetics.

Authors:  Jae-Woong Jeong; Jordan G McCall; Gunchul Shin; Yihui Zhang; Ream Al-Hasani; Minku Kim; Shuo Li; Joo Yong Sim; Kyung-In Jang; Yan Shi; Daniel Y Hong; Yuhao Liu; Gavin P Schmitz; Li Xia; Zhubin He; Paul Gamble; Wilson Z Ray; Yonggang Huang; Michael R Bruchas; John A Rogers
Journal:  Cell       Date:  2015-07-16       Impact factor: 41.582

4.  Fully integrated silicon probes for high-density recording of neural activity.

Authors:  James J Jun; Nicholas A Steinmetz; Joshua H Siegle; Daniel J Denman; Marius Bauza; Brian Barbarits; Albert K Lee; Costas A Anastassiou; Alexandru Andrei; Çağatay Aydın; Mladen Barbic; Timothy J Blanche; Vincent Bonin; João Couto; Barundeb Dutta; Sergey L Gratiy; Diego A Gutnisky; Michael Häusser; Bill Karsh; Peter Ledochowitsch; Carolina Mora Lopez; Catalin Mitelut; Silke Musa; Michael Okun; Marius Pachitariu; Jan Putzeys; P Dylan Rich; Cyrille Rossant; Wei-Lung Sun; Karel Svoboda; Matteo Carandini; Kenneth D Harris; Christof Koch; John O'Keefe; Timothy D Harris
Journal:  Nature       Date:  2017-11-08       Impact factor: 49.962

5.  A wirelessly powered and controlled device for optical neural control of freely-behaving animals.

Authors:  Christian T Wentz; Jacob G Bernstein; Patrick Monahan; Alexander Guerra; Alex Rodriguez; Edward S Boyden
Journal:  J Neural Eng       Date:  2011-06-23       Impact factor: 5.379

6.  Close-Packed Silicon Microelectrodes for Scalable Spatially Oversampled Neural Recording.

Authors:  Jorg Scholvin; Justin P Kinney; Jacob G Bernstein; Caroline Moore-Kochlacs; Nancy Kopell; Clifton G Fonstad; Edward S Boyden
Journal:  IEEE Trans Biomed Eng       Date:  2016-01       Impact factor: 4.538

7.  Chronic in vivo multi-circuit neurophysiological recordings in mice.

Authors:  Kafui Dzirasa; Romulo Fuentes; Sunil Kumar; Juan M Potes; Miguel A L Nicolelis
Journal:  J Neurosci Methods       Date:  2010-11-27       Impact factor: 2.390

8.  Injectable, cellular-scale optoelectronics with applications for wireless optogenetics.

Authors:  Tae-il Kim; Jordan G McCall; Yei Hwan Jung; Xian Huang; Edward R Siuda; Yuhang Li; Jizhou Song; Young Min Song; Hsuan An Pao; Rak-Hwan Kim; Chaofeng Lu; Sung Dan Lee; Il-Sun Song; Gunchul Shin; Ream Al-Hasani; Stanley Kim; Meng Peun Tan; Yonggang Huang; Fiorenzo G Omenetto; John A Rogers; Michael R Bruchas
Journal:  Science       Date:  2013-04-12       Impact factor: 47.728

9.  Large-scale, high-density (up to 512 channels) recording of local circuits in behaving animals.

Authors:  Antal Berényi; Zoltán Somogyvári; Anett J Nagy; Lisa Roux; John D Long; Shigeyoshi Fujisawa; Eran Stark; Anthony Leonardo; Timothy D Harris; György Buzsáki
Journal:  J Neurophysiol       Date:  2013-12-18       Impact factor: 2.714

10.  The flexDrive: an ultra-light implant for optical control and highly parallel chronic recording of neuronal ensembles in freely moving mice.

Authors:  Jakob Voigts; Joshua H Siegle; Dominique L Pritchett; Christopher I Moore
Journal:  Front Syst Neurosci       Date:  2013-05-13
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  4 in total

Review 1.  Through the looking glass: A review of cranial window technology for optical access to the brain.

Authors:  Samuel W Cramer; Russell E Carter; Justin D Aronson; Suhasa B Kodandaramaiah; Timothy J Ebner; Clark C Chen
Journal:  J Neurosci Methods       Date:  2021-02-15       Impact factor: 2.390

2.  Polymer Skulls With Integrated Transparent Electrode Arrays for Cortex-Wide Opto-Electrophysiological Recordings.

Authors:  Preston D Donaldson; Zahra S Navabi; Russell E Carter; Skylar M L Fausner; Leila Ghanbari; Timothy J Ebner; Sarah L Swisher; Suhasa B Kodandaramaiah
Journal:  Adv Healthc Mater       Date:  2022-08-19       Impact factor: 11.092

3.  Single neuron recording: progress towards high-throughput analysis.

Authors:  Andrew Alegria; Amey Joshi; Jacob O'Brien; Suhasa B Kodandaramaiah
Journal:  Bioelectron Med (Lond)       Date:  2020-09-17

4.  Miniaturized head-mounted microscope for whole-cortex mesoscale imaging in freely behaving mice.

Authors:  Mathew L Rynes; Daniel A Surinach; Samantha Linn; Michael Laroque; Vijay Rajendran; Judith Dominguez; Orestes Hadjistamoulou; Zahra S Navabi; Leila Ghanbari; Gregory W Johnson; Mojtaba Nazari; Majid H Mohajerani; Suhasa B Kodandaramaiah
Journal:  Nat Methods       Date:  2021-04-05       Impact factor: 28.547

  4 in total

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