Literature DB >> 32401520

Self-Healing Dyes-Keeping the Promise?

Michael Isselstein1, Lei Zhang1, Viktorija Glembockyte2,3, Oliver Brix1, Gonzalo Cosa3, Philip Tinnefeld2, Thorben Cordes1.   

Abstract

Self-healing dyes have emerged as a new promising class of fluorescent labels. They consist of two units, a fluorescent dye and a photostabilizer. The latter heals whenever the fluorescent dye is in danger of taking a reaction pathway toward photobleaching. We describe the underlying concepts and summarize the developmental history and state-of-the-art, including latest applications in high-resolution microscopy, live-cell, and single-molecule imaging. We further discuss remaining limitations, which are (i) lower photostabilization of most self-healing dyes when compared to solution additives, (ii) limited mechanistic understanding on the influence of the biochemical environment and molecular oxygen on self-healing, and (iii) the lack of cheap and facile bioconjugation strategies. Finally, we provide ideas on how to further advance self-healing dyes, show new data on redox blinking caused by double-stranded DNA, and highlight forthcoming work on intramolecular photostabilization of fluorescent proteins.

Entities:  

Year:  2020        PMID: 32401520     DOI: 10.1021/acs.jpclett.9b03833

Source DB:  PubMed          Journal:  J Phys Chem Lett        ISSN: 1948-7185            Impact factor:   6.475


  9 in total

Review 1.  Single-molecule counting applied to the study of GPCR oligomerization.

Authors:  Joshua N Milstein; Daniel F Nino; Xiaohan Zhou; Claudiu C Gradinaru
Journal:  Biophys J       Date:  2022-08-03       Impact factor: 3.699

Review 2.  FRET-based dynamic structural biology: Challenges, perspectives and an appeal for open-science practices.

Authors:  Eitan Lerner; Anders Barth; Jelle Hendrix; Benjamin Ambrose; Victoria Birkedal; Scott C Blanchard; Richard Börner; Hoi Sung Chung; Thorben Cordes; Timothy D Craggs; Ashok A Deniz; Jiajie Diao; Jingyi Fei; Ruben L Gonzalez; Irina V Gopich; Taekjip Ha; Christian A Hanke; Gilad Haran; Nikos S Hatzakis; Sungchul Hohng; Seok-Cheol Hong; Thorsten Hugel; Antonino Ingargiola; Chirlmin Joo; Achillefs N Kapanidis; Harold D Kim; Ted Laurence; Nam Ki Lee; Tae-Hee Lee; Edward A Lemke; Emmanuel Margeat; Jens Michaelis; Xavier Michalet; Sua Myong; Daniel Nettels; Thomas-Otavio Peulen; Evelyn Ploetz; Yair Razvag; Nicole C Robb; Benjamin Schuler; Hamid Soleimaninejad; Chun Tang; Reza Vafabakhsh; Don C Lamb; Claus Am Seidel; Shimon Weiss
Journal:  Elife       Date:  2021-03-29       Impact factor: 8.140

3.  Characterization of Fluorescent Proteins with Intramolecular Photostabilization*.

Authors:  Sarah S Henrikus; Konstantinos Tassis; Lei Zhang; Jasper H M van der Velde; Christian Gebhardt; Andreas Herrmann; Gregor Jung; Thorben Cordes
Journal:  Chembiochem       Date:  2021-07-22       Impact factor: 3.461

4.  Targetable Conformationally Restricted Cyanines Enable Photon-Count-Limited Applications*.

Authors:  Patrick Eiring; Ryan McLaughlin; Siddharth S Matikonda; Zhongying Han; Lennart Grabenhorst; Dominic A Helmerich; Mara Meub; Gerti Beliu; Michael Luciano; Venu Bandi; Niels Zijlstra; Zhen-Dan Shi; Sergey G Tarasov; Rolf Swenson; Philip Tinnefeld; Viktorija Glembockyte; Thorben Cordes; Markus Sauer; Martin J Schnermann
Journal:  Angew Chem Int Ed Engl       Date:  2021-11-17       Impact factor: 16.823

Review 5.  Caveat fluorophore: an insiders' guide to small-molecule fluorescent labels.

Authors:  Jonathan B Grimm; Luke D Lavis
Journal:  Nat Methods       Date:  2021-12-23       Impact factor: 47.990

Review 6.  Bleaching-Resistant Super-Resolution Fluorescence Microscopy.

Authors:  Jiwoong Kwon; Mohamed Saleh Elgawish; Sang-Hee Shim
Journal:  Adv Sci (Weinh)       Date:  2022-01-27       Impact factor: 16.806

7.  Linker Molecules Convert Commercial Fluorophores into Tailored Functional Probes during Biolabelling.

Authors:  Lei Zhang; Michael Isselstein; Jens Köhler; Nikolaos Eleftheriadis; Nadia M Huisjes; Miguel Guirao-Ortiz; Alessandra Narducci; Jochem H Smit; Janko Stoffels; Hartmann Harz; Heinrich Leonhardt; Andreas Herrmann; Thorben Cordes
Journal:  Angew Chem Int Ed Engl       Date:  2022-02-26       Impact factor: 16.823

8.  Image segmentation and separation of spectrally similar dyes in fluorescence microscopy by dynamic mode decomposition of photobleaching kinetics.

Authors:  Daniel Wüstner
Journal:  BMC Bioinformatics       Date:  2022-08-12       Impact factor: 3.307

9.  Cyclooctatetraene-conjugated cyanine mitochondrial probes minimize phototoxicity in fluorescence and nanoscopic imaging.

Authors:  Zhongtian Yang; Liuju Li; Jing Ling; Tianyan Liu; Xiaoshuai Huang; Yuqing Ying; Yun Zhao; Yan Zhao; Kai Lei; Liangyi Chen; Zhixing Chen
Journal:  Chem Sci       Date:  2020-07-27       Impact factor: 9.825

  9 in total

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