Literature DB >> 32396835

The Genomics of Human Local Adaptation.

Jasmin S Rees1, Sergi Castellano2, Aida M Andrés3.   

Abstract

Modern humans inhabit a variety of environments and are exposed to a plethora of selective pressures, leading to multiple genetic adaptations to local environmental conditions. These include adaptations to climate, UV exposure, disease, diet, altitude, or cultural practice and have generated important genetic and phenotypic differences amongst populations. In recent years, new methods to identify the genomic signatures of natural selection underlying these adaptations, combined with novel types of genetic data (e.g., ancient DNA), have provided unprecedented insights into the origin of adaptive alleles and the modes of adaptation. As a result, numerous instances of local adaptation have been identified in humans. Here, we review the most exciting recent developments and discuss, in our view, the future of this field.
Copyright © 2020. Published by Elsevier Ltd.

Entities:  

Keywords:  adaptive introgression; genealogical methods; genetic adaptation; genetic-environmental correlation; polygenic selection; positive selection; selection on de novo mutation (SDN); selection on standing variation (SSV)

Mesh:

Year:  2020        PMID: 32396835     DOI: 10.1016/j.tig.2020.03.006

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  18 in total

1.  Genomic basis of neotropical primate adaptations.

Authors:  Carlos G Schrago
Journal:  Proc Natl Acad Sci U S A       Date:  2022-09-28       Impact factor: 12.779

2.  GeMo: a web-based platform for the visualization and curation of genome ancestry mosaics.

Authors:  Marilyne Summo; Aurore Comte; Guillaume Martin; Pierrick Perelle; Eric M Weitz; Gaëtan Droc; Mathieu Rouard
Journal:  Database (Oxford)       Date:  2022-07-14       Impact factor: 4.462

3.  The genomic signatures of natural selection in admixed human populations.

Authors:  Sebastian Cuadros-Espinoza; Guillaume Laval; Lluis Quintana-Murci; Etienne Patin
Journal:  Am J Hum Genet       Date:  2022-03-07       Impact factor: 11.043

4.  Learning the properties of adaptive regions with functional data analysis.

Authors:  Mehreen R Mughal; Hillary Koch; Jinguo Huang; Francesca Chiaromonte; Michael DeGiorgio
Journal:  PLoS Genet       Date:  2020-08-27       Impact factor: 5.917

Review 5.  The influence of evolutionary history on human health and disease.

Authors:  Mary Lauren Benton; Abin Abraham; Abigail L LaBella; Patrick Abbot; Antonis Rokas; John A Capra
Journal:  Nat Rev Genet       Date:  2021-01-06       Impact factor: 53.242

6.  Low Diversity of Human Variation Despite Mostly Mild Functional Impact of De Novo Variants.

Authors:  Yannick Mahlich; Maximillian Miller; Zishuo Zeng; Yana Bromberg
Journal:  Front Mol Biosci       Date:  2021-03-18

7.  Ecological traps: evidence of a fitness cost in a cavity-nesting bird.

Authors:  Ronalds Krams; Tatjana Krama; Guntis Brūmelis; Didzis Elferts; Linda Strode; Iluta Dauškane; Severi Luoto; Agnis Šmits; Indrikis A Krams
Journal:  Oecologia       Date:  2021-06-21       Impact factor: 3.225

8.  High gene flow maintains genetic diversity following selection for high EPSPS copy number in the weed kochia (Amaranthaceae).

Authors:  Sara L Martin; Leshawn Benedict; Wei Wei; Connie A Sauder; Hugh J Beckie; Linda M Hall
Journal:  Sci Rep       Date:  2020-11-02       Impact factor: 4.996

9.  Blood groups of Neandertals and Denisova decrypted.

Authors:  Silvana Condemi; Stéphane Mazières; Pierre Faux; Caroline Costedoat; Andres Ruiz-Linares; Pascal Bailly; Jacques Chiaroni
Journal:  PLoS One       Date:  2021-07-28       Impact factor: 3.240

Review 10.  Inferring archaic introgression from hominin genetic data.

Authors:  Shyamalika Gopalan; Elizabeth G Atkinson; Laura T Buck; Timothy D Weaver; Brenna M Henn
Journal:  Evol Anthropol       Date:  2021-05-05
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