| Literature DB >> 32395481 |
Fazhong He1, Bao Sun2, Ling Li3, Mouze Liu2, Weijie Lin1, Lin Liu1, Yinxiang Sun1, Yuhong Luo1, Lin Wu4, Ligong Lu1, Wei Zhang2, Zhiling Zhou1.
Abstract
BACKGROUND: Our previous studies have found that single nucleotide polymorphisms (SNPs) of tribbles homolog 3 (TRIB3) are related to the hypotensive effects of calcium-channel blockers (CCBs) and angiotensin-converting enzyme (ACE) inhibitors. In this study, we aimed at exploring and validating the effect of TRIB3 polymorphism on antihypertensive drugs responses.Entities:
Keywords: Tribbles homolog 3 (TRIB3); felodipine; hypertension; individualized drug therapy; pharmacogenetics
Year: 2020 PMID: 32395481 PMCID: PMC7210142 DOI: 10.21037/atm.2020.03.176
Source DB: PubMed Journal: Ann Transl Med ISSN: 2305-5839
Figure 1Outline of the study protocol.
Primer sequences of TRIB3 SNPs
| SNPs | Primer sequences |
|---|---|
| rs11470129 | F: ACGTTGGATGCATGTCCACTTCTCCTAAAG |
| R: ACGTTGGATGAAACAGTGACTGTTGTCGGG | |
| rs4815567 | F: ACGTTGGATGCACCTGTGTCTCAGGAGATG |
| R: ACGTTGGATGTGTCCCCTGCACCGCCAAC | |
| rs2295490 | F: ACGTTGGATGCGTTTCGGGAGGTTTCTTGG |
| R: ACGTTGGATGAGGCTGTAGAATACCTTCTC | |
| rs6037475 | F: ACGTTGGATGACTCAGCAGTGACCAGAATG |
| R: ACGTTGGATGTTCCTGATAATGGTCTATC |
SNP, single nucleotide polymorphism; TRIB3, tribbles homolog 3.
Clinical baseline characteristics of the study cohort
| Characteristics | HCTZ + felodipine (N=397) | HCTZ + placebo (N=433) | P value |
|---|---|---|---|
| Sex (male, n%) | 198 (49.8) | 217 (50.2) | 0.15 |
| Age (years) | 61.6±7.0 | 61.3±7.0 | 0.58 |
| BMI (kg/m2) | 26.0±3.8 | 26.2±3.9 | 0.55 |
| Randomization SBP (mmHg) | 155±11 | 155±12 | 0.34 |
| Randomization DBP (mmHg) | 91±8 | 91±8 | 0.97 |
| Randomization MAP (mmHg) | 112±7 | 112±7 | 0.54 |
| Randomization HR (bpm) | 78±9 | 77±8 | 0.012 |
MAP was calculated as MBP = DBP + (SBP-DBP)/3. HCTZ, hydrochlorothiazide; BMI, body mass index; DBP, diastolic blood pressure; SBP, systolic blood pressure, HR, heart rate; MAP, mean arterial pressure.
Predicted common SNPs with potential functional significance in TRIB3 gene based on ENCODE bioinformatics tools
| SNP_ID | Chr | Gene | Function | MAFa (%) | MAFb (%) | Pb-HWD |
|---|---|---|---|---|---|---|
| rs2295490 (A>G) | chr20:368905 | TRIB3 | Missense | 19.2 | 20.7 | 0.31 |
| rs11470129 (-/AA) | chr20:360678 | TRIB3 | Neargene-5 | 31.7 | 23.0 | 0.035 |
| rs4815567 (G>A) | chr20:362078 | TRIB3 | Neargene-5 | 21.6 | 27.1 | 0.42 |
| rs6037475 (T>C) | chr20:358685 | TRIB3 | Upstream | 32.4 | 35.5 | 0.88 |
a, data from 1,000 Genomes Project (CHS + CHB), b, data from our study cohort (screening patients or all patients). SNP, single nucleotide polymorphism; TRIB3, tribbles pseudokinase 3; MAF, minimum allele frequency; HWD, Hardy-Weinberg disequilibrium.
Association of testing for the candidate SNPs on blood pressure reduction in patients with hypertension after the felodipine or placebo treatment
| SNP_ID | P-F (n=136) | P-P (n=123) | P-all (n=259) |
|---|---|---|---|
| SBP | |||
| rs2295490 (A>G) | 0.62 | 0.38 | 0.34 |
| rs11470129 (-/AA) | 0.61 | 0.24 | 0.29 |
| rs4815567 (G>A) | 0.38 | 0.53 | 0.76 |
| rs6037475 (T>C) | 0.12 | 0.99 | 0.71 |
| DBP | |||
| rs2295490 (A>G) | 0.20 | 0.66 | 0.15 |
| rs11470129 (-/AA) | 0.056 | 0.44 | 0.16 |
| rs4815567 (G>A) | 0.36 | 0.38 | 0.44 |
| rs6037475 (T>C) | 5.5×10−3 | 0.051 | 7.0×10−4 |
| MAP | |||
| rs2295490 (A>G) | 0.37 | 0.41 | 0.17 |
| rs11470129 (-/AA) | 0.99 | 0.45 | 0.42 |
| rs4815567 (G>A) | 0.98 | 0.68 | 0.66 |
| rs6037475 (T>C) | 0.26 | 0.37 | 0.46 |
P-F present as HCTZ + felodipine treatment group; P-P present as HCTZ + placebo treatment group. MAP was calculated as MBP = DBP+(SBP-DBP)/3. SNP, single nucleotide polymorphism; DBP, diastolic blood pressure; SBP, systolic blood pressure; MAP, mean arterial pressure.
Figure 2Preliminary screening test of TRIB3 rs6037475 genetic variation on blood pressure response during the follow-up between felodipine and placebo treatment groups. Data are shown as mean ± SEM. P values were estimated from a mixed linear regression model with adjustments for sex, age and BMI. Panels (A-C) respectively illustrate that BP-changes from the baseline in patients carrying the TRIB3 rs6037475 genotype after felodipine or placebo treatment. TRIB3, tribbles homolog 3; BMI, body mass index.
Validation testing for TRIB3 rs6037475 on blood pressure reduction in patients with hypertension after the felodipine or placebo treatment
| SNP_ID | P-F (n=261) | P-P (n=310) | P- all (n=571) |
|---|---|---|---|
| SBP | |||
| rs6037475 (T>C) | 0.062 | 0.99 | 0.17 |
| DBP | |||
| rs6037475 (T>C) | 0.021 | 0.52 | 0.12 |
| MAP | |||
| rs6037475 (T>C) | 0.061 | 0.79 | 0.33 |
P-F present as HCTZ + felodipine treatment group; P-P present as HCTZ + placebo treatment group. MAP was calculated as MBP = DBP+(SBP-DBP)/3. TRIB3, tribbles homolog 3; SNP, single nucleotide polymorphism; DBP, diastolic blood pressure; SBP, systolic blood pressure; MAP, mean arterial pressure.
Figure 3Validation testing of TRIB3 rs6037475 genetic variation on blood pressure response during the follow-up between felodipine and placebo treatment groups. Data are shown as mean ± SEM, P values were estimated from a mixed linear regression model with adjustments for sex, age and BMI. Panels (A-C) respectively illustrate that BP-changes from the baseline in patients carrying the TRIB3 rs6037475 genotype after felodipine or placebo treatment. TRIB3, tribbles homolog 3; BMI, body mass index.
The effect of TRIB3 rs6037475 on blood pressure reduction in patients with hypertension after the felodipine or placebo treatment
| SNP_ID | P-F (n=397) | P-P (n=433) | P-all (n=830) |
|---|---|---|---|
| SBP | |||
| rs6037475 (T>C) | 0.028 | 0.35 | 0.019 |
| DBP | |||
| rs6037475 (T>C) | 2.1×10−3 | 0.43 | 2.7×10−3 |
| MAP | |||
| rs6037475 (T>C) | 1.3×10−3 | 0.41 | 3.2×10−3 |
P-F present as HCTZ + felodipine treatment group; P-P present as HCTZ + placebo treatment group. MAP was calculated as MBP = DBP + (SBP-DBP)/3. TRIB3, tribbles homolog 3; SNP, single nucleotide polymorphism; DBP, diastolic blood pressure; SBP, systolic blood pressure; MAP, mean arterial pressure.
Association of TRIB3 rs6037475 genetic variation on blood pressure reduction in patients with hypertension after the felodipine or placebo treatment
| Variables | Genotype | HCTZ + felodipine (n=397) | HCTZ + placebo (n=433) | |||
|---|---|---|---|---|---|---|
| Mean (mmHg) | P | Mean (mmHg) | P | |||
| TT (ref) | −17.8±0.21 | −12.1±0.22 | ||||
| CT | −15.9±0.22 | 0.30 | −13.1±0.18 | 0.63 | ||
| CC | −10.2±0.74 | 7.8×10−3 | −9.6±0.50 | 0.28 | ||
| TT (ref) | −10.2±0.23 | −7.4±0.14 | ||||
| CT | −8.5±0.17 | 0.081 | −7.3±0.11 | 0.99 | ||
| CC | −4.6±0.50 | 3.0×10−4 | −5.3±0.32 | 0.23 | ||
| TT (ref) | −12.7±0.14 | −8.9±0.22 | ||||
| CT | −10.9±0.16 | 0.11 | −9.2±0.18 | 0.81 | ||
| CC | −6.5±0.54 | 3.0×10−4 | −6.7±0.50 | 0.34 | ||
HCTZ, hydrochlorothiazide; TRIB3, tribbles homolog 3.
Figure 4Data of all combined patients with TRIB3 rs6037475 genetic variation for blood pressure lowering during the follow-up between felodipine and placebo treatment groups. Data are shown as mean ± SEM. P values were estimated from a mixed linear regression model with adjustments for sex, age and BMI. Panels (A-C) respectively illustrate that BP-changes from the baseline in patients carrying the TRIB3 rs6037475 genotype after felodipine or placebo treatment. TRIB3, tribbles homolog 3; BMI, body mass index.
Blood pressure response between the felodipine or placebo treatment groups according to TRIB3 rs6037475 genotype
| Variables | Genotype | HCTZ + felodipine (n=397), mean (mmHg) | HCTZ + placebo (n=433), mean (mmHg) | P |
|---|---|---|---|---|
| TRIB3 rs6037475 (SBP-changes) | TT (ref) | −17.8±0.21 | −12.1±0.22 | 0.005 |
| TC | −15.9±0.22 | −13.1±0.18 | 0.13 | |
| CC | −10.2±0.74 | −9.6±0.50 | 0.73 | |
| TRIB3 rs6037475 (DBP-changes) | TT (ref) | −10.2±0.23 | −7.4±0.14 | 0.019 |
| TC | −8.5±0.17 | −7.3±0.11 | 0.19 | |
| CC | −4.6±0.50 | −5.3±0.32 | 0.54 | |
| TRIB3 rs6037475 (MAP-changes) | TT (ref) | −12.7±0.14 | −8.9±0.22 | 0.006 |
| TC | −10.9±0.16 | −9.2±0.18 | 0.15 | |
| CC | −6.5±0.54 | −6.7±0.50 | 0.90 |
MAP was calculated as MBP = DBP + (SBP-DBP)/3. TRIB3, tribbles homolog 3; HCTZ, hydrochlorothiazide; DBP, diastolic blood pressure; SBP, systolic blood pressure; MAP, mean arterial pressure.