Literature DB >> 32394459

PSIXAS: A Psi4 plugin for efficient simulations of X-ray absorption spectra based on the transition-potential and Δ-Kohn-Sham method.

Christopher Ehlert1,2, Tillmann Klamroth3.   

Abstract

Near edge X-ray absorption fine structure (NEXAFS) spectra and their pump-probe extension (PP-NEXAFS) offer insights into valence- and core-excited states. We present PSIXAS, a recent implementation for simulating NEXAFS and PP-NEXAFS spectra by means of the transition-potential and the Δ-Kohn-Sham method. The approach is implemented in form of a software plugin for the Psi4 code, which provides access to a wide selection of basis sets as well as density functionals. We briefly outline the theoretical foundation and the key aspects of the plugin. Then, we use the plugin to simulate PP-NEXAFS spectra of thymine, a system already investigated by others and us. It is found that larger, extended basis sets are needed to obtain more accurate absolute resonance positions. We further demonstrate that, in contrast to ordinary NEXAFS simulations, where the choice of the density functional plays a minor role for the shape of the spectrum, for PP-NEXAFS simulations the choice of the density functional is important. Especially hybrid functionals (which could not be used straightforwardly before to simulate PP-NEXAFS spectra) and their amount of "Hartree-Fock like" exact exchange affects relative resonance positions in the spectrum.
© 2020 Wiley Periodicals, Inc.

Entities:  

Keywords:  X-ray absorption; X-ray absorption spectroscopy; transition-potential method; Δ-Kohn-Sham

Year:  2020        PMID: 32394459     DOI: 10.1002/jcc.26219

Source DB:  PubMed          Journal:  J Comput Chem        ISSN: 0192-8651            Impact factor:   3.376


  4 in total

1.  Psi4 1.4: Open-source software for high-throughput quantum chemistry.

Authors:  Daniel G A Smith; Lori A Burns; Andrew C Simmonett; Robert M Parrish; Matthew C Schieber; Raimondas Galvelis; Peter Kraus; Holger Kruse; Roberto Di Remigio; Asem Alenaizan; Andrew M James; Susi Lehtola; Jonathon P Misiewicz; Maximilian Scheurer; Robert A Shaw; Jeffrey B Schriber; Yi Xie; Zachary L Glick; Dominic A Sirianni; Joseph Senan O'Brien; Jonathan M Waldrop; Ashutosh Kumar; Edward G Hohenstein; Benjamin P Pritchard; Bernard R Brooks; Henry F Schaefer; Alexander Yu Sokolov; Konrad Patkowski; A Eugene DePrince; Uğur Bozkaya; Rollin A King; Francesco A Evangelista; Justin M Turney; T Daniel Crawford; C David Sherrill
Journal:  J Chem Phys       Date:  2020-05-14       Impact factor: 3.488

2.  An assessment of different electronic structure approaches for modeling time-resolved x-ray absorption spectroscopy.

Authors:  Shota Tsuru; Marta L Vidal; Mátyás Pápai; Anna I Krylov; Klaus B Møller; Sonia Coriani
Journal:  Struct Dyn       Date:  2021-03-12       Impact factor: 2.920

3.  XABOOM: An X-ray Absorption Benchmark of Organic Molecules Based on Carbon, Nitrogen, and Oxygen 1s → π* Transitions.

Authors:  Thomas Fransson; Iulia E Brumboiu; Marta L Vidal; Patrick Norman; Sonia Coriani; Andreas Dreuw
Journal:  J Chem Theory Comput       Date:  2021-02-05       Impact factor: 6.006

4.  The porphyrin center as a regulator for metal-ligand covalency and π hybridization in the entire molecule.

Authors:  Robby Büchner; Mattis Fondell; Robert Haverkamp; Annette Pietzsch; Vinícius Vaz da Cruz; Alexander Föhlisch
Journal:  Phys Chem Chem Phys       Date:  2021-11-10       Impact factor: 3.676

  4 in total

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