Literature DB >> 32394387

Automated Co-in Situ Hybridization and Immunofluorescence Using Archival Tumor Tissue.

Leah K Officer1, Kleopatra E Andreou1, Ana V Teodósio1, Zhangyi He1, John P Le Quesne2,3,4.   

Abstract

In situ hybridization (ISH) and immunohistochemistry (IHC) are valuable tools for molecular pathology and cancer research. Recent advances in multiplex technology, assay automation, and digital image analysis have enabled the development of co-ISH IHC or immunofluorescence (IF) methods, which allow researchers to simultaneously view and quantify expression of mRNA and protein within the preserved tissue spatial context. These data are vital to the study of the control of gene expression in the complex tumor microenvironment.

Entities:  

Keywords:  Autostainer; Digital pathology; Image analysis; Immunofluorescence; Immunohistochemistry; In situ hybridization; Multiplex; Pathology informatics; Quantitative analysis; Translational control

Mesh:

Substances:

Year:  2020        PMID: 32394387     DOI: 10.1007/978-1-0716-0623-0_16

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  4 in total

Review 1.  Tumors as organs: complex tissues that interface with the entire organism.

Authors:  Mikala Egeblad; Elizabeth S Nakasone; Zena Werb
Journal:  Dev Cell       Date:  2010-06-15       Impact factor: 12.270

2.  Quantitative Multiplex Immunohistochemistry Reveals Myeloid-Inflamed Tumor-Immune Complexity Associated with Poor Prognosis.

Authors:  Takahiro Tsujikawa; Sushil Kumar; Rohan N Borkar; Vahid Azimi; Guillaume Thibault; Young Hwan Chang; Ariel Balter; Rie Kawashima; Gina Choe; David Sauer; Edward El Rassi; Daniel R Clayburgh; Molly F Kulesz-Martin; Eric R Lutz; Lei Zheng; Elizabeth M Jaffee; Patrick Leyshock; Adam A Margolin; Motomi Mori; Joe W Gray; Paul W Flint; Lisa M Coussens
Journal:  Cell Rep       Date:  2017-04-04       Impact factor: 9.423

3.  Stability of eukaryotic translation initiation factor 4E mRNA is regulated by HuR, and this activity is dysregulated in cancer.

Authors:  Ivan Topisirovic; Nadeem Siddiqui; Slobodanka Orolicki; Lucy A Skrabanek; Mathieu Tremblay; Trang Hoang; Katherine L B Borden
Journal:  Mol Cell Biol       Date:  2008-12-29       Impact factor: 4.272

4.  Microenvironmental niche divergence shapes BRCA1-dysregulated ovarian cancer morphological plasticity.

Authors:  Andreas Heindl; Adnan Mujahid Khan; Daniel Nava Rodrigues; Katherine Eason; Anguraj Sadanandam; Cecilia Orbegoso; Marco Punta; Andrea Sottoriva; Stefano Lise; Susana Banerjee; Yinyin Yuan
Journal:  Nat Commun       Date:  2018-09-25       Impact factor: 14.919

  4 in total

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