Literature DB >> 32391496

Molecular Hybrids Integrated with Benzimidazole and Pyrazole Structural Motifs: Design, Synthesis, Biological Evaluation, and Molecular Docking Studies.

Ramar Sivaramakarthikeyan1, Shunmugam Iniyaval1, Vadivel Saravanan1, Wei-Meng Lim2, Chun-Wai Mai2,3, Chennan Ramalingan1.   

Abstract

Synthesis of a series of benzimidazole-ornamented pyrazoles, 6a-6j has been obtained from arylhydrazine and aralkyl ketones via a multistep synthetic strategy. Among them, a hybrid-possessing para-nitrophenyl moiety connected to a pyrazole scaffold (6a) exerted the highest anti-inflammatory activity, which is superior to the standard, diclofenac sodium. While executing the 2,2-diphenyl-1-picrylhydrazyl radical-scavenging activity, a hybrid-possessing para-bromophenyl unit integrated at the pyrazole structural motif (6i) exhibited the highest activity among the hybrids examined. Besides, evaluation of anticancer potency of the synthesized hybrids revealed that the one containing a para-fluorophenyl unit tethered at the pyrazole nucleus (6h) showed the highest activity against both the pancreatic cancer cells (SW1990 and AsPCl) investigated. Considerable binding affinity between B-cell lymphoma and the hybrid, 6h has been reflected while performing molecular docking studies (-8.65 kcal/mol). The outcomes of the investigation expose that these hybrids could be used as effective intermediates to construct more potent biological agents.
Copyright © 2020 American Chemical Society.

Entities:  

Year:  2020        PMID: 32391496      PMCID: PMC7203960          DOI: 10.1021/acsomega.0c00630

Source DB:  PubMed          Journal:  ACS Omega        ISSN: 2470-1343


Introduction

Cancer has become the second leading cause of death worldwide over the past decades and is characterized by untamed augmentation and propagation of abnormal cells.[1] According to World Health Organization, nearly 9.6 million people around the world passed away because of cancer in the year 2018 and globally one in six deaths is due to cancer.[1] Particularly, because of its high invasive nature and chemoresistance, the fatality rate as a result of pancreatic cancer is found to be reasonably higher.[2] Pancreatic cancer has the least 5 year survival rate in comparison with other cancer types due to its poor prognosis. Also, there has been no significant improvement in its survival rate since 1975. It is documented that pancreatic cancer is the fourth important origin of cancer death in the United States.[3] The typical treatment modalities, radiotherapy and chemotherapy have experienced obstruction in the hard-fought battle against cancer, with multidrug resistance being the utmost faltering block. As eradication of cancer is the extreme challenge of medicine, the present utmost need is development of novel drugs that can destroy the cancer cells. Benzimidazole nucleus is utilized as privileged structural motif in the development of a wide range of drugs with interest in numerous therapeutic areas.[4−16] The marketed anticancer drugs tethered with benzimidazole nucleus are furnished in Figure .
Figure 1

Anticancer drugs possessing benzimidazole structural motif.

Anticancer drugs possessing benzimidazole structural motif. Diverse ranges of biological potencies of agents possessing a benzimidazole unit are ascribed to the unique fused imidazole and benzene rings, which can interact with a variety of targets of biological importance in a noncovalent mode because of the presence of two hetero atoms (nitrogens) as well as its electron-rich aromatic system.[17,18] Various anticancer drugs possessing the benzimidazole structural motif are developed by researchers around the globe, and these are effectively utilized to treat cancers. Although various chemical entities possessing the benzimidazole structural motif are developed with appreciable anticancer potency, veliparib, pracinostat, bendamustine, and selumetinib are some of the drugs which are clinically used for cancers. Galeterone is yet another anticancer chemical entity which is under clinical trial (phase III) (Figure ).[19−22] On the other hand, pyrazole and its analogues are promising scaffolds in medicinal chemistry. These pyrazole molecules are one of the largely investigated groups of molecules among the family of azole. Because of the significant biological potency including anti-inflammatory, antifungal, antibacterial, antioxidant, anticancer, antidepressant, and antiviral profile of pyrazole-incorporated molecules, much attention has been focused on the same.[23−29] Representative examples of drug molecules tethered with pyrazole moiety are provided in Figure .[30−38]
Figure 2

Anticancer drugs possessing pyrazole scaffold.

Anticancer drugs possessing pyrazole scaffold. Furthermore, a plethora of reports depicting nitrile-incorporated chemical entities and their biological importance are documented around the globe:[39−43] for example, trilostane is effectively utilized to treat breast cancer (women post-menopause). The existence of larger number of cyano pharmaceuticals is due to the biocompatibility of the nitrile.[44] Polarized triple bond, short length, and least steric requirement (cylindrical diameter of 3.6 Å) are some of the characteristics of nitriles. In addition, because of their electron richness on the nitrogen/polarizability, the nitriles play imperative role as hydrogen bond acceptors.[45] In modern medicinal chemistry, researchers utilize the approach of pharmacophore hybridization to synthesize novel biopertinent chemical entities. This strategy is nothing but hybridization of two or more molecules possessing different bioactive structural motifs to harvest a novel bioactive chemical entity with enhanced potency.[46−52] It has been reported that molecules possessing an imidazole structural motif induce effective cell death through inhibition of PI3K-mediated PI3K/Akt/mTOR signaling pathway.[53] On the other hand, molecules containing a pyrazole scaffold induce apoptosis through caspase-dependent pathways and inactivate protein kinase B/Akt activity.[54] Provoked by the aforementioned observations and our ongoing research on synthesis of novel heterocycles as biological agents,[55−58] we designed and synthesized a series of novel chemical entities tethered with pyrazole and benzimidazole structural motifs (Figure ) with a view to produce potent biological agents.
Figure 3

General structure of target molecules.

General structure of target molecules.

Results and Discussion

Synthesis

The schematic representation for the synthesis of title benzimidazole-tethered pyrazoles, 6a–6j is provided in Scheme . First, the pyrazole-based carbaldehydes, 4a–4j are synthesized by the condensation of arylhydrazine and appropriate aralkyl ketone, 2a–2j in glacial acetic acid followed by cyclization of the hydrazone intermediates, 3a–3j thus obtained using the Vilsmeier–Haack (VH) reaction. Knoevenagel reaction between the pyrazole-based carbaldehydes, 4a–4j with benzimidazolyl acetonitrile, 5 in the presence of a base eventually produced the title benzimidazole-tethered pyrazoles (6a–6j) in good yields (Table ).
Scheme 1

Synthesis of Benzimidazole-Tethered Pyrazoles, 6a–6j

Table 1

Yields and Melting Points of Target Molecules, 6a–6j

s. no.moleculesyield (%)MP (°C)
16a78336–337
26b91310–311
36c87270–271
46d93308–310
56e90258–259
66f92315–316
76g88260–261
86h82314–315
96i85298–299
106j93306–307
In the IR spectra of the title chemical entities, 6a–6j, a key band observed in the region between 3345 and 3280 cm–1 corresponds to N–H stretching frequency, whereas the other one observed between 2250 and 2190 cm–1 corresponds to CN stretching frequency. In the proton nuclear magnetic resonance (NMR) spectra of all title chemical entities, 6a–6j, the signals for aromatic protons as well as methylenic protons resonate in the region between 9.30 and 7.15 ppm. In 6d, a three-proton singlet results at 3.86 ppm corresponding to protons of the methoxy group integrated at one of the phenyl rings attached with pyrazole nucleus. Furthermore, a singlet with three protons integral resonates at 2.42 ppm in 6f that is due to the presence of a methyl substituent on one of the phenyl moieties tethered with the pyrazole unit. In the carbon NMR spectra of the eventual benzimidazole-tethered pyrazoles, the aromatic carbons as well as methylenic carbons resonate in the region between 161 and 115 ppm. A signal resonates at 55.7 ppm in 6d corresponding to carbon of the methoxy group attached at one of the aryl groups. In 6f, a signal observed at 21.3 ppm is due to carbon of the methyl group tethered at one of the aryl groups. All these key characteristics besides other bands/peaks as well as micro analysis results corroborate the formation of target molecules. The schematic description of the reasonable mechanistic route for the construction of title chemical entities is provided in Scheme . The base, piperidine abstracts one of the acidic protons of the methylene group of benzimidazolyl acetonitrile, A to provide an anion, benzimidazolyl cyanomethanide, B (this can have two resonance forms, B and B′), whereas piperidine becomes piperidinium cation. The benzimidazolyl cyanomethanide B serves as a nucleophile, then attacks the carbonyl carbon of the pyrazole-based aldehyde, C to become the anionic intermediate, D. The oxide anion D attacks a proton of piperidinium cation and becomes hydroxyl intermediate, E. The hydroxyl intermediate E then loses a proton due to its abstraction by piperidine, followed by bond reorganization and elimination of a hydroxide ion eventually furnishes the title chemical entity (F).
Scheme 2

Plausible Mechanism

Biological Evaluations

Anti-inflammatory Activity

The method of protein denaturation is utilized for the determination of anti-inflammatory evaluation of the target imidazole-tethered pyrazoles, 6a–6j.[59] In this methodology, generally, the tertiary as well as secondary structure of protein would be lost when an external molecule or stress is applied. When denatured, the biological function of most biological proteins would be lost. It is well known that a documented basis of inflammation is denaturation of protein. One of the parts of this investigation, potency of title benzimidazole-tethered pyrazoles, 6a–6j to inhibit the denaturation of protein was measured (in triplicate). As a standard drug, diclofenac sodium was utilized in this examination and it provided ∼90% inhibition of protein denaturation. The inhibition percentages of protein denaturation while using the title chemical entities, 6a–6j are provided in Table .
Table 2

Anti-inflammatory Activity of 6a–6j

s. no.compound% inhibition
16a93.53 ± 1.37
26b68.77 ± 1.89
36c76.11 ± 0.98
46d73.36 ± 2.04
56e83.44 ± 2.37
66f68.77 ± 1.54
76g86.19 ± 1.29
86h60.52 ± 1.84
96i75.19 ± 1.23
106j86.19 ± 1.34
11DSa90.13 ± 1.45

Diclofenac sodium.

Diclofenac sodium. Of all chemical entities investigated, one of them (i.e., 6a) exhibited superior activity when compared to the standard, whereas two of them (i.e., 6g and 6j) exerted ∼95% inhibition when compared to the standard. On the whole, all molecules exhibited good to excellent anti-inflammatory activity and among them, the chemical entity possessing nitro substituent 6a exerted highest activity when compared with all other molecules investigated and also the activity is superior to that of the standard drug.

Radical Scavenging Activity

In order to determine the radical scavenging activity, a number of techniques including ferric reducing antioxidant power, hydroxyl radical scavenging assay, and organic radical scavenging assay exist. Of those, organic radical scavenging by 2,2-diphenyl-1-picrylhydrazyl (DPPH) is being broadly used by the scientific community around the globe because of its simplicity. In this piece of research, we examined the radical scavenging activity of all synthesized hybrids, 6a–6j using the method of DPPH.[60] The activity is evaluated in terms of DPPH inhibition (in triplicate), and the outcomes are furnished in Table .
Table 3

Radical Scavenging Activity of Target Molecules, 6a–6j

s. no.molecule% scavengingIC50 (μM)
16a53.22 ± 0.9894.63
26b55.10 ± 1.65248.80
36c50.91 ± 1.3495.99
46d53.81 ± 2.13121.50
56e52.52 ± 1.8782.41
66f46.53 ± 1.2398.35
76g52.80 ± 1.9421.99
86h54.21 ± 1.27284.50
96i64.34 ± 1.9510.61
106j50.34 ± 1.4834.82
11AA88.75 ± 0.89169.88
As seen in Table , all chemical entities exhibited moderate to good radical scavenging potency when compared with the standard ascorbic acid. Of all title benzimidazole-tethered pyrazoles synthesized, the one integrated with the bromo functionality at the para position of one of the aryl groups connected to pyrazole structural motif exerted the highest DPPH inhibition.

Anticancer Activity

Two of the molecular hybrids, 6e and 6i were reported as potential therapeutics for human umbilical vein endothelial cell (HUVEC) proliferation.[61] According to the report, HUVEC was used as an antiangiogenesis cell model. However, as our group has been working on the development of a diverse range of heterocyclic molecular hybrids as anticancer agents against pancreatic cancer in the recent years, our aim in this study is to focus on the effects on pancreatic cancer cells. Our transcriptomic study[62] suggested that AsPC1 is a progenitor of human pancreatic cancer cells, whereas SW1990 is a squamous human pancreatic cancer cell line. The inclusion of squamous cancer cells (SW1990) in this study is based on our previous finding suggesting that these cells were more resistant to treatment and had worse prognosis. As a comparison, a progenitor cancer cells (AsPC1) was used. As a part of this investigation, we have assessed the anticancer evaluation of all synthesized target benzimidazole-tethered pyrazoles, 6a–6j against human pancreatic cancer cell line AsPCl (progenitor)[62] and SW1990 (squamous)[62] (in triplicate) by adopting a well-known method, CellTiter-Glo luminescent cell viability assay.[62−67] The IC50 values of the tested target chemical entities against the human pancreatic cancer cell lines such as SW1990 and AsPC1 as well as non-cancerous cell line, MRC5 are provided in Table .
Table 4

Anticancer Activity of Target Chemical Entities, 6a–6j

  IC50 (μM)
s. no.compoundSW1990AsPC1MRC5
16a61.8 ± 2.12>100>100
26b>100>100>100
36c64.1 ± 1.2782.5 ± 0.98>100
46d57.6 ± 2.0162.4 ± 1.65>100
56e>100>100>100
66f>100>100>100
76g70.3 ± 0.87>100>100
86h30.9 ± 0.7732.8 ± 3.4480.0 ± 1.19
96i>100>100>100
106j>100>100>100
11gemcitabine35.09 ± 1.7839.27 ± 4.4454.17 ± 0.20
Among all chemical entities tested, 6b, 6e, 6f, 6i and 6j exerted IC50 values of greater than 100 μM against both cancer cell lines, whereas the rest of the chemical entities exhibited IC50 values of less than 100 μM except 6a against AsPC1, which exhibited greater than 100 μM. Of all, chemical entity 6h exhibited the best activity against both cancer cell lines. The anticancer activity of all chemical entities against a non-cancerous cell line such as MRC5 was also investigated, and it was observed that the IC50 value of the most active chemical entity is much higher than the IC50 values against the cancer cell lines. This result clearly implies that the most active chemical entity, the one possessing fluoro substituent on the para position of one of the aryl moiety tethered at pyrazole motif (6h) is less toxic.

Molecular Docking

Binding affinity, acquired from the protein data bank, and molecular sources of communications among the active sites of B-cell lymphoma (BCL-2; PDB ID: 4LXD), and the structure of benzimidazole-tethered pyrazole, 6h, a conformationally stabilized one (three-dimensionally stabilized), were measured through molecular docking studies by employing AutoDock version 4.0. The results gained via docking are furnished in Figure . The benzimidazole-tethered pyrazole 6h exerted its binding energy −8.65 kcal/mol besides its predicted IC50 value of 457.41 nM. The molecule, 6h exhibits van der Waals interactions with phenyl alanine (PHE 101, PHE 109, PHE 150), tyrosine (TYR 105), and leucine (LEU 134), that is amino acids with hydrophobic and aromatic side chains, glutamic acid (GLU 149) and aspartic acid (ASP 108), that is electrically charged acidic amino acids, and glycine (GLY 142), which is a simple hydrophobic amino acid. In addition, conventional hydrogen bond relation between the secondary amino group of the imidazole scaffold and hydrophobic and aliphatic amino acid alanine (ALA 146) was seen. A donor–donor interaction between arginine (ARG 143), an electrically charged and basic amino acid, and a fluoro-containing aromatic ring tethered with pyrazole structural motif, as well as nitrogen at 2-position of pyrazole is noted. In addition, an interaction between carbon and π-of arginine (ARG 143), an electrically charged and basic amino acid, and a fluoro-possessing aromatic moiety, respectively, was also observed. There also exists a π and lone pair interaction between the aromatic nucleus directly linked with the nitrogen of the pyrazole scaffold and glutamic acid (GLU 133), an electrically charged acidic amino acid, respectively. Besides, π–alkyl interactions between fused phenyl ring of the benzimidazole structural motif and amino acids with hydrophobic and aliphatic side chains viz., methionine (MET 112) as well as valine (VAL 153) are noticed. Also, the molecule exhibits π–alkyl interactions between an electrically charged and basic amino acid, arginine (ARG 136) and phenyl moiety integrated with nitrogen of the pyrazole unit as well as an amino acid with hydrophobic and aromatic side chain leucine (LEU 134) and the other aromatic nucleus tethered with the pyrazole scaffold.
Figure 4

Two- and three-dimensional interactions of BCL-2 with 6h.

Two- and three-dimensional interactions of BCL-2 with 6h.

Conclusions

A series of heterocyclic hybrids possessing benzimidazole and pyrazole structural motifs, 6a–6j has been synthesized by employing condensation followed by cyclization, formylation, and Knoevenagel reactions. The structure of the hybrids has unequivocally been established based on spectral and physical methods. Of the benzimidazolepyrazole hybrids, the one possessing the para-nitrophenyl moiety connected to a pyrazole ring (6a) offered the highest anti-inflammatory activity when evaluated using the protein denaturation method. The evaluation of DPPH radical scavenging activity implies that the para-bromo phenyl structural unit containing the benzimidazolepyrazole hybrid, 6i provided the highest activity. Anticancer evaluation by the CellTiter-Glo luminescent cell viability assay technique reflects that among all benzimidazolepyrazole hybrids, the one tethered with the para-fluorophenyl substituent, 6h exhibited the highest activity against both the human pancreatic cancer cells viz., SW1990 and AsPCl with less toxicity. Molecular docking made known significant binding affinity between B-cell lymphoma and the most active hybrid, 6h. The results reveal that these potent hybrids could serve as competent biological agents and/or be used as competent intermediates to build significant biological agents. Evaluation of anticancer profile of the prominent molecules against various other cancer cell lines, besides constructing hybrids with more structural diversification, hoping to achieve superior outcome, are presently ongoing at our laboratory.

Experimental Section

General

All chemicals were purchased from commercial sources. The chemicals used herein are reagent grade and were utilized as-received. All solvents were distilled/dried by employing standard procedures before their utilization. Analytical thin-layer chromatography (TLC) was performed on the precoated TLC sheets of silica gel 60, F254 (Merck, Germany) and visualized by long- and short-wavelength UV lamps. Column chromatography was performed on silica gel (spherical, 100–200 mesh) slurry packed in glass columns. The eluent systems used for individual separations are furnished in the respective experimental procedures. All Fourier-transform infrared (FT-IR) spectra in KBr pellets were recorded on a Shimadzu IR Tracer-100 spectrophotometer in the range of 4000–400 cm–1. 1H and 13C NMR spectra were recorded on an NMR spectrometer (Bruker AVANCE II 400 and 100 MHz) at 25 °C with the use of tetramethylsilane as an internal standard and DMSO-d6 as the solvent; chemical shifts are expressed in terms of parts per million (δ ppm).

General Method for the Synthesis of Pyrazole-Based Aldehydes, 4a–4j

A mixture of respective ketones (83.3 mmol) and phenylhydrazine (99.8 mmol) in glacial acetic acid (20 mL) was heated on a water bath for 30 min. The reaction mixture was filtered after cooling and the resulting solid was washed with dilute HCl followed by cold rectified spirit. Recrystallization of the same from ethanol provided the pure respective arylhydrazones, 3a–3j.[68] Synthesis of pyrazole-based aldehydes, 4a–4j was carried out by the application of cold solution of 2 mol VH reagent [dimethylformamide (DMF, 100 mL) – POCl3 (26 mL, 0.28 mol adduct)] in DMF with respective arylhydrazones, 3a–3j. The reaction mixture was stirred at 70–80 °C for 5–6 h, and it was cooled to room temperature, then poured into cold water. Saturated solution of sodium bicarbonate was then added to neutralize the mixture and the solid thus obtained was filtered, washed with water, and dried to get the aldehydes, 4a–4j.[68]

General Method for the Synthesis of Benzimidazole-Tethered Pyrazoles, 6a–6j

A methanolic solution of the respective pyrazole-based aldehydes, 4a–4j (1 equiv in 10 mL) was added 2-benzimidazoleacetonitrile, 5 (1 equiv) and piperidine (1 equiv). The contents of the flask were refluxed for 2 h, then attaining ambient temperature. The crude thus obtained was poured onto ice pieces and after some time the precipitate was formed. The formed precipitate was filtered and dried. It was then subjected to recrystallization using ethanol to afford pure target molecules, 6a–6j.

Synthesis of Benzimidazole-Tethered Pyrazole, 6a

A mixture of pyrazole-based aldehyde, 4a (0.5 g, 1.71 mmol) in methanol (10 mL) was added to 2-benzimidazoleacetonitrile, 5 (0.27 g, 1.71 mmol) and piperidine (0.15 g, 1.71 mmol). After completion of the reaction by adopting the general method, the target molecule, 6a was obtained. FT-IR (KBr, cm–1) ν: 3305.9, 2218.1, 1595.1, 1521.8, 1423.5, 1348.2, 1232.5, 1109.1, 1068.6, 960.6, 862.2, 817.8, 758.0, 684.7, 636.5, and 497.6; 1H NMR (400 MHz, DMSO-d6): δ 9.30 (s, 1H), 8.44 (d, J = 8.8 Hz, 2H), 8.18 (2, 1H), 8.06 (d, J = 8.8 Hz, 2H), 8.00 (d, J = 8 Hz, 2H), 7.65 (t, J = 7.6 Hz, 4H), 7.51 (t, J = 7.2 Hz, 1H), and 7.27–7.24 (m, 2H); 13C NMR (100 MHz, DMSO-d6): δ 151.8, 148.0, 139.0, 138.0, 135.3, 130.5, 130.4, 129.7, 128.5, 124.6, 123.3, 120.0, 117.0, and 116.3; Anal. Calcd for C25H16N6O2 (%): C, 69.44; H, 3.73; N, 19.43. Found: C, 69.52; H, 3.79; N, 19.37.

Synthesis of Benzimidazole-Tethered Pyrazole, 6b

A mixture of pyrazole-based aldehyde, 4b (0.5 g, 1.58 mmol), 2-benzimidazoleacetonitrile 5 (0.25 g, 1.58 mmol), and piperidine (0.13 g, 1.58 mmol) in methanol (10 mL), after completion of the reaction by adopting the general method, provide the target molecule, 6b. FT-IR (KBr, cm–1) ν: 3290.4, 2240.1, 1600.7, 1531.3, 1418.1, 1355.3, 1244.5, 1111.2, 1052.7, 969.6, 856.5, 813.3, 757.0, 677.7, 663.5, 635.3, and 497.6; 1H NMR (400 MHz, DMSO-d6): δ 9.25 (s, 1H), 7.95–7.92 (m, 3H), 7.82 (s, 1H), 7.70–7.59 (m, 6H), 7.47 (t, J = 7.6 Hz, 1H), and 7.24–7.22 (m, 2H); 13C NMR (100 MHz, DMSO-d6): δ 151.7, 147.7, 139.0, 135.6, 134.4, 130.4, 130.1, 129.5, 128.4, 128.3, 128.2, 123.3, 119.9, 117.2, and 117.1; Anal. Calcd for C25H15Cl2N5 (%): C, 65.80; H, 3.31; N, 15.35. Found: C, 65.91; H, 3.25; N, 15.28.

Synthesis of Benzimidazole-Tethered Pyrazole, 6c

A mixture of pyrazole-based aldehyde, 4c (0.5 g, 1.53 mmol) in methanol (10 mL) was added to 2-benzimidazoleacetonitrile, 5 (0.24 g, 1.53 mmol) and piperidine (0.13 g, 1.53 mmol). After completion of the reaction by adopting the general method, the target molecule, 6c was obtained. FT-IR (KBr, cm–1): δ 3345.6, 3085.6, 2236.2, 1599.2, 1544.4, 1526.5, 1444.6, 1435.7, 1362.3, 1327.7, 1243.4, 1180.4, 1089.8, 1056.9, 1012.6, 950.9, 923.9, 840.9, 813.9, 795.0, 745.7, 679.9, 638.4, 615.6, 585.6, and 546.8; 1H NMR (400 MHz, DMSO-d6): δ 9.25 (s, 1H), 8.15 (s, 1H), 7.96 (t, J = 8 Hz, 3H), 7.78–7.71 (m, 2H), 7.64–7.54 (m, 5H), 7.47 (t, J = 7.2 Hz, 1H), and 7.26–7.23 (m, 2H); 13C NMR (100 MHz, DMSO-d6): δ 152.6, 147.8, 139.1, 135.6, 133.9, 132.3, 131.6, 130.3, 129.2, 128.6, 128.3, 123.3, 122.7, 119.9, 117.1, and 115.9; Anal. Calcd for C25H16BrN5 (%): C, 64.39; H, 3.46; N, 15.02. Found: C, 64.46; H, 3.50; N, 15.09.

Synthesis of Benzimidazole-Tethered Pyrazole, 6d

A mixture of pyrazole-based aldehyde, 4d (0.5 g, 1.78 mmol), 2-benzimidazoleacetonitrile, 5 (0.28 g, 1.78 mmol), and piperidine (0.15 g, 1.78 mmol) in methanol (10 mL), after completion of the reaction by adopting the general method, gave the target molecule, 6d. FT-IR (KBr, cm–1) ν: 3335.6, 3085.6, 2935.4, 2884.3, 2245.3, 1601.2, 1548.2, 1530.5, 1447.7, 1438.4, 1370.3, 1330.4, 1250.4, 1175.4, 1090.4, 1065.2, 1012.6, 950.9, 923.9, 840.9, 813.9, 795.0, 754.2, 680.9, 640.3, 620.4, and 585.6; 1H NMR (400 MHz, DMSO-d6): δ 9.22 (s, 1H), 8.14 (s, 1H), 7.95 (d, J = 7.6 Hz, 2H), 7.67–7.59 (m, 6H), 7.45 (t, J = 7.6 Hz, 1H), 7.25–7.22 (m, 2H), 7.15 (d, J = 8.8 Hz, 2H), and 3.86 (s, 3H); 13C NMR (100 MHz, DMSO-d6): δ 160.4, 154.2, 147.9, 139.2, 136.2, 130.7, 130.6, 130.3, 128.8, 128.1, 123.9, 123.2, 119.8, 119.4, 118.8, 117.3, 115.6, 114.9, 114.8, 114.5, and 55.7; Anal. Calcd for C26H19N5O (%): C, 74.80; H, 4.59; N, 16.78. Found: C, 74.91; H, 4.51; N, 16.73.

Synthesis of Benzimidazole-Tethered Pyrazole, 6e

A mixture of pyrazole-based aldehyde, 4e (0.5 g, 1.77 mmol) in methanol (10 mL) was added to 2-benzimidazoleacetonitrile, 5 (0.28 g, 1.77 mmol) and piperidine (0.15 g, 1.77 mmol). After completion of the reaction by adopting the general method, it provided the target molecule, 6e. FT-IR (KBr, cm–1) ν: 3290.4, 2220.1, 1600.7, 1531.3, 1418.1, 1355.3, 1244.5, 1111.2, 1067.7, 975.5, 865.2, 810.5, 757.2, 685.7, 663.5, 655.3, and 458.6; 1H NMR (400 MHz, DMSO-d6): δ 9.25 (s, 1H), 8.12 (s, 1H), 7.96 (d, J = 7.6 Hz, 2H), 7.76 (d, J = 8.4 Hz, 2H), 7.67–7.60 (m, 6H), 7.47 (t, J = 7.6 Hz, 1H), and 7.26–7.24 (m, 2H); 13C NMR (100 MHz, DMSO-d6): δ 153.1, 147.8, 139.1, 135.7, 134.4, 131.1, 130.8, 130.4, 130.3, 129.5, 129.3, 129.2, 128.3, 123.3, 119.9, 117.1, and 115.8; Anal. Calcd for C25H16ClN5 (%): C, 71.17; H, 3.82; N, 16.60. Found: C, 71.26; H, 3.87; N, 16.55.

Synthesis of Benzimidazole-Tethered Pyrazole, 6f

A mixture of pyrazole-based aldehyde, 4f (0.5 g, 1.91 mmol), 2-benzimidazoleacetonitrile, 5 (0.30 g, 1.91 mmol), and piperidine (0.16 g, 1.91 mmol) in methanol (10 mL), after completion of the reaction by adopting the general method, furnished the target molecule, 6f. FT-IR (KBr, cm–1) ν: 3295.4, 2190.5, 1705.6, 1600.7, 1531.3, 1418.1, 1368.5, 1355.3, 1244.5, 1111.2, 1052.7, 969.6, 856.5, 813.3, 757.0, 677.7, 663.5, 635.3, and 497.6; 1H NMR (400 MHz, DMSO-d6): δ 9.23 (s, 1H), 8.14 (s, 1H), 7.95 (d, J = 7.6 Hz, 2H), 7.63–7.59 (m, 6H), 7.48–7.44 (m, 1H), 7.42–7.40 (m, 2H), 7.25–7.22 (m, 2H), and 2.42 (s, 3H); 13C NMR (100 MHz, DMSO-d6): δ 154.4, 147.8, 139.2, 139.1, 136.2, 130.3, 130.0, 129.3, 128.9, 128.7, 128.1, 123.2, 119.8, 117.2, and 21.3; Anal. Calcd for C26H19N5 (%): C, 77.79; H, 4.77; N, 17.44. Found: C, 77.89; H, 4.70; N, 17.49.

Synthesis of Benzimidazole-Tethered Pyrazole, 6g

To a mixture of pyrazole-based aldehyde, 4g (0.5 g, 1.77 mmol) in methanol (10 mL), were added 2-benzimidazoleacetonitrile, 5 (0.28 g, 1.77 mmol) and piperidine (0.15 g, 1.77 mmol). After completion of the reaction by adopting the general method, it gave the target molecule, 6g. FT-IR (KBr, cm–1) ν: 3323.4, 2212.4, 1589.3, 1525.7, 1498.7, 1415.8, 1355.9, 1305.8, 1271.1, 1240.2, 1078.2, 954.8, 918.1, 817.8, 756.1, 736.8, 680.9, 650.0, 609.5, 574.8, 513.1, 470.6, and 439.8; 1H NMR (400 MHz, DMSO-d6): δ 9.25 (s, 1H), 8.15 (s, 1H), 7.96 (t, J = 8 Hz, 3H), 7.78–7.72 (m, 2H), 7.64–7.54 (m, 5H), 7.47 (t, J = 7.6 Hz, 1H), and 7.26–7.24 (m, 2H); 13C NMR (100 MHz, DMSO-d6): δ 152.6, 147.8, 139.1, 135.6, 133.9, 132.3, 131.6, 130.3, 129.2, 128.6, 128.3, 123.3, 122.7, 119.9, 117.1, and 115.9; Anal. Calcd for C25H16ClN5 (%): C, 71.17; H, 3.82; N, 16.60. Found: C, 71.29; H, 3.87; N, 16.54.

Synthesis of Benzimidazole-Tethered Pyrazole, 6h

A mixture of pyrazole-based aldehyde, 4h (0.5 g, 1.88 mmol) (10 mL), 2-benzimidazoleacetonitrile, 5 (0.29 g, 1.88 mmol), and piperidine (0.16 g, 1.71 mmol) in methanol (10 mL), after the completion of the reaction by adopting the general method, offered the target molecule, 6h. FT-IR (KBr, cm–1) ν: 3300.2, 3062.9, 2216.2, 1595.1, 1533.4, 1508.3, 1446.6, 1417.7, 1354.0, 1307.7, 1273.0, 1153.4, 1089.8, 1056.9, 1012.6, 950.9, 923.9, 840.9, 813.9, 785.0, 738.7, 680.9, 638.4, and 607.6; 1H NMR (400 MHz, DMSO-d6): δ 9.24 (s, 1H), 8.12 (s, 1H), 7.96 (d, J = 8 Hz, 2H), 7.81–7.77 (m, 2H), 7.64–7.58 (m, 4H), 7.49–7.42 (m, 3H), and 7.25–7.23 (m, 2H); 13C NMR (100 MHz, DMSO-d6): δ 164.4, 161.9, 153.3, 147.8, 139.1, 135.9, 131.5, 130.3, 129.1, 128.2, 128.1, 123.3, 119.9, 117.2, 116.5, 116.3, and 115.8; Anal. Calcd for C25H16FN5 (%): C, 74.06; H, 3.98; N, 17.27. Found: C, 74.19; H, 3.92; N, 17.20.

Synthesis of Benzimidazole-Tethered Pyrazole, 6i

To a mixture of pyrazole-based aldehyde, 4i (0.5 g, 1.53 mmol) in methanol (10 mL) were added 2-benzimidazoleacetonitrile, 5 (0.24 g, 1.53 mmol) and piperidine (0.13 g, 1.53 mmol). After completion of the reaction by adopting the general method, it offered the target molecule, 6i. FT-IR (KBr, cm–1) ν: 3326.6, 3094.6, 2250.2, 1595.6, 1544.4, 1526.5, 1462.6, 1453.1, 1362.3, 1327.7, 1243.4, 1180.4, 1098.5, 1056.9, 1017.3, 955.5, 932.7, 844.9, 825.7, 795.0, 745.7, 679.9, 647.4, 625.6, 577.8, and 534.2; 1H NMR (400 MHz, DMSO-d6): δ 9.25 (s, 1H), 8.13 (s, 1H), 7.96 (d, J = 8 Hz, 2H), 7.80 (d, J = 8.4 Hz, 2H), 7.70 (d, J = 8.4 Hz, 2H), 7.63–7.60 (m, 4H), 7.49–7.45 (m, 1H), and 7.26–7.24 (m, 2H); 13C NMR (100 MHz, DMSO-d6): δ 153.1, 147.7, 139.1, 135.7, 132.4, 131.4, 130.8, 130.0, 129.2, 128.3, 123.1, 119.9, 117.1, and 115.8; Anal. Calcd for C25H16BrN5 (%): C, 64.39; H, 3.46; N, 15.02. Found: C, 64.48; H, 3.53; N, 14.95.

Synthesis of Benzimidazole-Tethered Pyrazole, 6j

A mixture of pyrazole-based aldehyde, 4j (0.5 g, 2.0 mmol), 2-benzimidazoleacetonitrile, 5 (0.32 g, 2.0 mmol), and piperidine (0.17 g, 2.0 mmol) in methanol (10 mL), after completion of the reaction by adopting the general method, provided the target molecule, 6j. FT-IR (KBr, cm–1) ν: 3304.1, 3061.0, 2216.2, 1593.2, 1531.5, 1502.6, 1444.7, 1419.6, 1361.7, 1305.8, 1274.9, 1242.2, 954.8, 921.9, 817.8, 777.3, 702.1, 678.9, 634.6, 609.5, 582.5, and 513.1; 1H NMR (400 MHz, DMSO-d6): δ 9.25 (s, 1H), 8.17 (s, 1H), 7.96 (d, J = 8 Hz, 2H), 7.74 (d, J = 6.4 Hz, 2H), 7.64–7.54 (m, 7H), 7.48–7.45 (m, 1H), and 7.25–7.23 (m, 2H); 13C NMR (100 MHz, DMSO-d6): δ 154.3, 147.8, 139.2, 136.1, 131.6, 130.3, 129.5, 129.4, 129.3, 129.1, 128.2, 123.3, 119.9, 117.2, and 115.8; Anal. Calcd for C25H17N5 (%): C, 77.50; H, 4.42; N, 18.08. Found: C, 77.59; H, 4.46; N, 18.02.

Anti-inflammatory Activity by Protein Denaturation Method

With minor modification, the Mizushima and Kobayashi[59] method has been utilized to evaluate the anti-inflammatory (in vitro) activity. The reaction mixture (2.5 mL) is molecules (1 mL; 1 mM), phosphate buffered saline (PBS, 1.4 mL; pH 6.4), and egg albumin (0.1 mL). The control used was double distilled water (equal volume). After incubation at 37 °C ± 2 for 15 min, the content was then heated at 70 °C for 5 min. Their absorbance, after attaining ambient temperature, was noted at 660 nm using vehicle as blank. As a reference drug, diclofenac sodium (1 mM) was utilized and treated alike to determine the absorbance. The percentage inhibition of protein denaturation was calculated by applying the following equation.where AC—absorbance of control, AS—absorbance of sample.

Radical Scavenging Activity by DPPH Method

The assay of radical scavenging (DPPH) was carried out as per the literature method[60] with slight modification. DPPH (1.6 mg) was dissolved in DMSO (50 mL). DPPH solution (1.5 mL) was added to each molecule prepared (1.5 mL; 100 μg/mL) and set aside for 45 min incubation at ambient temperature under dark condition. The absorbance variations at 517 nm were then measured. The blank DPPH solution (absorbance at 517 nm) was used as the control. The DPPH free-radical scavenging activity was calculated by using the equation mentioned belowwhere AC—absorbance of control, AS—absorbance of sample.

Anticancer Evaluation

The AsPC1 and SW1990 (human pancreatic cancer cells) were acquired from the American Type Culture Collection (ATCC), USA. RPMI–fetal bovine serum medium supplemented with 100 IU/mL of penicillin and 100 μg/mL of streptomycin (Sigma-Aldrich, St. Louis, MO, USA) was used to culture all cells. The cells were incubated at 37 °C in 5% CO2, utilizing the established standard in vitro cell culture method.[62−65] To assess antitumor effects of the synthesized molecules, stock solutions of the same in DMSO (100 mM) were first prepared, then further diluted to 0.1 mM in sterile PBS. The cells were treated based on the reported method of cell viability assay. Initially, 384-well plates were seeded with the cells (1500 cells/well). The plates were incubated for 24 h. And then the cells were treated with the molecules synthesized for 72 h. Cell viability was recorded using the CellTiter-Glo luminescent cell viability assay (Promega, USA). The luminescence readings were measured using a SpectraMax M3 microplate reader (Molecular Devices Corporation, USA).
  3 in total

Review 1.  A Review of the Recent Development in the Synthesis and Biological Evaluations of Pyrazole Derivatives.

Authors:  Oluwakemi Ebenezer; Michael Shapi; Jack A Tuszynski
Journal:  Biomedicines       Date:  2022-05-12

2.  A novel series of pyrazole derivatives toward biological applications: experimental and conceptual DFT characterization.

Authors:  Pedro D Ortiz; Judith Castillo-Rodriguez; Jorge Tapia; Ximena Zarate; Gabriel A Vallejos; Vanesa Roa; Elies Molins; Carlos Bustos; Eduardo Schott
Journal:  Mol Divers       Date:  2021-11-01       Impact factor: 3.364

3.  Organocatalytic atroposelective construction of axially chiral N, N- and N, S-1,2-azoles through novel ring formation approach.

Authors:  Yu Chang; Chuandong Xie; Hong Liu; Shengli Huang; Pengfei Wang; Wenling Qin; Hailong Yan
Journal:  Nat Commun       Date:  2022-04-11       Impact factor: 14.919

  3 in total

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